Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 1.2e-154 550.1 330 100.0
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 3.2e-83 312.8 221 70.6
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 4.2e-83 312.4 231 68.0
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 6.7e-81 305.1 225 67.1
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.7e-79 300.4 225 66.7
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 1.1e-78 297.7 225 68.9
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.0e-76 291.2 233 64.4
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.3e-76 290.8 239 64.0
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 1.3e-76 290.8 239 64.0
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 2.2e-76 290.0 229 64.6
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 1.1e-75 287.7 228 64.5
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 1.4e-75 287.3 238 61.8
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 3.2e-75 286.2 228 63.6
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 4.2e-75 285.8 209 67.9
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 9.4e-75 284.6 225 63.6
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 2.1e-74 283.5 228 62.7
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 4.7e-74 282.3 223 64.1
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 4.7e-74 282.3 229 62.4
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 4.7e-74 282.3 236 61.9
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 7.9e-74 281.6 239 62.3
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 1.0e-73 281.2 228 62.7
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 1.4e-73 280.8 243 59.3
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 1.4e-73 280.8 228 62.3
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 1.4e-73 280.8 234 62.0
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 1.8e-73 280.4 228 61.8
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 2.3e-73 280.0 234 62.0
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 2.3e-73 280.0 228 61.8
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 3.0e-73 279.6 234 62.0
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 3.9e-73 279.3 225 61.3
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 8.8e-73 278.1 234 61.5
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 1.1e-72 277.7 225 63.1
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 1.5e-72 277.3 234 61.5
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 1.5e-72 277.3 228 61.8
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 2.6e-72 276.6 232 61.2
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 2.6e-72 276.6 214 65.0
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 4.4e-72 275.8 225 62.2
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 4.4e-72 275.8 225 62.2
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 5.7e-72 275.4 225 62.2
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 7.4e-72 275.0 254 57.9
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 1.7e-71 273.9 245 58.0
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 2.2e-71 273.5 246 58.1
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 2.2e-71 273.5 239 61.5
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 2.8e-71 273.1 234 60.7
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 6.3e-71 271.9 233 59.2
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 1.1e-70 271.2 228 59.6
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.1e-70 271.2 239 59.0
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 1.4e-70 270.8 249 55.8
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 4.1e-70 269.2 224 60.7
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 7.0e-70 268.5 221 61.1
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 7.0e-70 268.5 221 61.5
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 7.0e-70 268.5 221 61.5
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 7.0e-70 268.5 223 60.1
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 9.1e-70 268.1 230 60.4
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 1.5e-69 267.3 225 60.4
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.5e-69 267.3 221 60.6
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 2.0e-69 266.9 221 61.1
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 2.6e-69 266.5 228 60.5
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 2.6e-69 266.5 224 61.6
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 3.5e-69 266.2 236 59.3
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 8.5e-68 261.5 228 57.9
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 8.5e-68 261.5 210 62.4
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 3.2e-67 259.6 244 56.6
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 7.2e-67 258.5 228 57.0
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 7.2e-67 258.5 212 61.8
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 1.2e-66 257.7 235 55.3
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 1.2e-66 257.7 208 62.0
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 1.6e-66 257.3 226 59.3
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 4.7e-66 255.8 232 56.9
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 4.7e-66 255.8 232 56.9
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 4.7e-66 255.8 232 56.9
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 8.0e-66 255.0 239 55.2
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 8.0e-66 255.0 239 55.2
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 8.8e-65 251.5 213 57.7
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 1.1e-64 251.1 199 64.3
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 4.8e-63 245.7 206 61.2
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 4.8e-63 245.7 307 47.2
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 4.1e-62 242.7 239 54.0
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 9.1e-62 241.5 200 61.0
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 4.5e-61 239.2 228 55.7
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.3e-60 237.7 239 54.4
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 8.5e-60 235.0 233 52.8
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 9.4e-59 231.5 261 48.3
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 6.1e-58 228.8 252 49.6
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.8e-57 227.3 239 50.6
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 2.3e-57 226.9 204 59.3
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 4.0e-57 226.1 167 63.5
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 8.8e-57 224.9 226 53.5
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 2.0e-56 223.8 199 57.8
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 3.1e-54 216.5 255 48.6
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 4.1e-54 216.1 176 63.6
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 5.4e-54 215.7 232 51.3
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 1.6e-53 214.2 227 50.2
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.1e-51 208.0 250 47.2
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.6e-50 204.1 222 53.6
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 2.3e-49 200.3 167 61.1
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 2.8e-47 193.4 190 52.6
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 9.1e-46 188.3 185 53.5
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 2.3e-41 173.7 238 43.3
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 7.3e-35 152.1 134 59.7
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 1.2e-32 144.8 137 57.7
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 2.7e-29 133.7 221 39.4
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 4.9e-23 112.8 98 52.0
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 4.4e-16 89.7 58 69.0
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 7.6e-16 89.0 72 58.3
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-15 88.2 128 40.6
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 2.2e-15 87.4 123 48.0
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 3.7e-15 86.7 57 71.9
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.1e-14 85.1 98 43.9
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 3.0e-12 77.0 58 62.1
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 8.6e-12 75.5 181 31.5
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 8.1e-10 68.9 41 68.3
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 5.2e-09 66.2 201 27.9
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 6.8e-09 65.9 47 63.8
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 7.6e-08 62.4 73 47.9


User provided reference genes

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