Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 7.4e-164 580.5 296 100.0
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 8.6e-128 460.7 292 80.1
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 2.6e-124 449.1 292 82.5
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 6.0e-113 411.4 294 76.5
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 2.1e-110 402.9 299 72.2
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 4.7e-110 401.7 303 72.6
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 2.3e-109 399.4 294 74.8
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 2.2e-107 392.9 296 72.3
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 1.7e-104 383.3 291 72.9
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 5.2e-101 371.7 298 67.4
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 6.4e-99 364.8 292 67.1
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 3.2e-98 362.5 310 62.9
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 7.1e-98 361.3 308 63.3
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 2.7e-97 359.4 308 62.7
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 1.0e-96 357.5 298 63.1
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.7e-96 356.7 307 61.6
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 5.1e-96 355.1 307 61.6
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 7.3e-95 351.3 310 61.0
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.6e-94 350.1 297 63.3
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 2.8e-94 349.4 296 63.9
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 1.1e-93 347.4 297 65.0
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 6.9e-93 344.7 307 59.9
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 1.2e-92 344.0 293 60.8
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 1.2e-92 344.0 329 59.6
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 1.5e-92 343.6 291 59.8
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 2.6e-92 342.8 295 63.7
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 4.4e-92 342.0 296 63.5
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 1.4e-90 337.0 297 60.9
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 2.4e-90 336.3 307 58.0
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 5.4e-90 335.1 293 61.8
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 2.1e-89 333.2 295 61.7
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 2.7e-89 332.8 297 61.6
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 7.8e-89 331.3 292 61.3
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 2.3e-88 329.7 307 59.9
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 3.9e-88 328.9 297 61.6
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 5.1e-88 328.6 302 61.3
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 6.6e-88 328.2 297 59.6
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 1.5e-87 327.0 294 59.5
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 1.9e-87 326.6 317 58.7
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 9.6e-87 324.3 307 59.0
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 9.6e-87 324.3 303 58.7
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 2.8e-86 322.8 297 58.6
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 3.6e-86 322.4 233 67.4
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 1.8e-85 320.1 291 59.5
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 3.1e-85 319.3 296 56.8
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 9.0e-85 317.8 188 80.3
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 1.5e-84 317.0 291 57.0
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 1.3e-83 313.9 306 57.8
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 4.9e-83 312.0 291 58.1
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 1.4e-82 310.5 331 56.8
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 3.5e-81 305.8 294 56.5
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 4.6e-81 305.4 187 74.3
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 4.6e-81 305.4 188 77.1
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 4.6e-81 305.4 188 77.1
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 4.6e-81 305.4 188 77.1
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 4.6e-81 305.4 188 77.1
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 6.0e-81 305.1 300 57.3
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 7.9e-81 304.7 296 56.4
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 7.9e-81 304.7 290 55.9
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 1.0e-80 304.3 181 79.0
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 1.0e-80 304.3 311 54.3
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 1.3e-80 303.9 315 54.6
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.3e-80 303.9 295 55.6
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 1.8e-80 303.5 298 55.7
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 2.3e-80 303.1 185 75.7
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 5.1e-80 302.0 181 76.8
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 1.1e-79 300.8 181 76.2
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 3.3e-79 299.3 308 55.2
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 5.6e-79 298.5 182 76.9
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 7.4e-79 298.1 185 75.1
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 1.6e-78 297.0 302 56.0
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 3.1e-77 292.7 189 72.5
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 4.0e-77 292.4 291 55.0
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 1.2e-76 290.8 181 76.8
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 1.5e-76 290.4 289 55.7
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 7.6e-76 288.1 303 58.1
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 3.8e-75 285.8 305 53.1
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 1.4e-74 283.9 259 58.7
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 3.2e-74 282.7 293 56.0
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 1.0e-72 277.7 148 90.5
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 6.7e-72 275.0 298 54.7
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 1.9e-71 273.5 165 76.4
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 3.3e-71 272.7 342 47.4
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.8e-70 269.6 183 68.9
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 2.6e-68 263.1 157 80.9
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 4.9e-67 258.8 164 73.8
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 1.3e-64 250.8 166 72.3
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.8e-64 250.4 301 50.5
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.1e-63 247.7 171 68.4
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 2.5e-63 246.5 162 74.1
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.6e-62 243.8 255 53.3
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 3.7e-62 242.7 157 76.4
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 3.4e-60 236.1 235 60.0
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 1.3e-56 224.2 263 51.3
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 8.2e-54 214.9 165 64.2
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 2.4e-53 213.4 251 46.2
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 1.5e-52 210.7 183 54.1
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.0e-52 210.3 184 54.9
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.6e-52 209.9 188 54.3
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 4.6e-49 199.1 244 51.6
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 5.1e-48 195.7 308 42.2
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 1.3e-46 191.0 177 57.6
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 1.7e-43 180.6 183 47.0
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 1.9e-42 177.2 132 67.4
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 6.7e-40 168.7 297 40.1
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 4.4e-39 166.0 166 52.4
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 8.2e-38 161.8 349 35.2
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 7.7e-36 155.2 154 50.0
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.7e-35 154.1 116 64.7
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 5.0e-35 152.5 198 43.4
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 4.4e-31 139.4 91 69.2
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 4.1e-29 132.9 181 40.9
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 2.8e-22 110.2 64 75.0
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 5.2e-08 62.8 34 79.4
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 1.3e-06 58.2 50 54.0
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 4.9e-06 56.2 59 44.1


User provided reference genes

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