Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5772 Trifolium pratense HOM05D005139 ORTHO05D006125 2.2e-154 548.9 270 100.0
Psat4g140160 Pisum sativum HOM05D005139 ORTHO05D006125 9.5e-142 506.9 269 93.7
Lj3g0013017 Lotus japonicus HOM05D005139 ORTHO05D006125 2.6e-139 498.8 269 90.3
VMungo1127G1423 Vigna mungo HOM05D005139 ORTHO05D006125 3.7e-138 495.0 269 90.3
Phvul.011G165500 Phaseolus vulgaris HOM05D005139 ORTHO05D006125 1.2e-136 490.0 269 89.6
Glyma.06G228700 Glycine max HOM05D005139 ORTHO05D006125 6.0e-136 487.6 268 88.8
Glyma.12G156300 Glycine max HOM05D005139 ORTHO05D006125 3.0e-135 485.3 268 88.8
Lalb_Chr03g0031181 Lupinus albus HOM05D005139 ORTHO05D006125 3.0e-135 485.3 269 89.6
Medtr8g058380 Medicago truncatula HOM05D005139 ORTHO05D006125 6.2e-133 477.6 269 87.4
arahy.Tifrunner.gnm1.ann1.J0RB3X Arachis hypogaea HOM05D005139 ORTHO05D006125 1.5e-131 473.0 269 86.2
Ciclev10019589m.g Citrus clementina HOM05D005139 ORTHO05D006125 4.4e-131 471.5 269 85.1
Prupe.4G161700 Prunus persica HOM05D005139 ORTHO05D006125 2.9e-130 468.8 269 84.4
Manes.15G095700 Manihot esculenta HOM05D005139 ORTHO05D006125 3.7e-130 468.4 269 83.3
Atru.chr2.2128 Acer truncatum HOM05D005139 ORTHO05D006125 1.1e-129 466.8 269 84.0
MD11G1264600 Malus domestica HOM05D005139 ORTHO05D006125 2.4e-129 465.7 269 84.8
Dinv18369 Davidia involucrata HOM05D005139 ORTHO05D006125 3.5e-128 461.8 269 84.0
Duzib213G0634 Durio zibethinus HOM05D005139 ORTHO05D006125 3.5e-128 461.8 268 84.0
TWI38G1771 Tripterygium wilfordii HOM05D005139 ORTHO05D006125 1.3e-127 459.9 269 82.5
GSVIVG01014182001 Vitis vinifera HOM05D005139 ORTHO05D006125 1.7e-127 459.5 269 82.9
Gohir.D01G042704 Gossypium hirsutum HOM05D005139 ORTHO05D006125 3.0e-127 458.8 268 82.8
Gorai.002G053800 Gossypium raimondii HOM05D005139 ORTHO05D006125 3.0e-127 458.8 268 82.8
Peaxi162Scf00000g06812 Petunia axillaris HOM05D005139 ORTHO05D006125 6.6e-127 457.6 268 83.2
ECA236G1068 Erigeron canadensis HOM05D005139 ORTHO05D006125 1.5e-126 456.4 269 82.9
Gohir.A01G053400 Gossypium hirsutum HOM05D005139 ORTHO05D006125 1.5e-126 456.4 268 82.5
Sed0024992 Sechium edule HOM05D005139 ORTHO05D006125 1.5e-126 456.4 269 81.0
TAR626G0095 Trochodendron aralioides HOM05D005139 ORTHO05D006125 1.5e-126 456.4 269 82.2
Solyc12g014320.2 Solanum lycopersicum HOM05D005139 ORTHO05D006125 2.5e-126 455.7 268 82.8
Sopen12g006100 Solanum pennellii HOM05D005139 ORTHO05D006125 2.5e-126 455.7 268 82.8
CSS0042561 Camellia sinensis var. sinensis HOM05D005139 ORTHO05D006125 4.3e-126 454.9 269 82.9
Thecc.07G118200 Theobroma cacao HOM05D005139 ORTHO05D006125 4.3e-126 454.9 268 82.8
Potri.011G108800 Populus trichocarpa HOM05D005139 ORTHO05D006125 7.3e-126 454.1 268 82.5
ClCG04G002160 Citrullus lanatus HOM05D005139 ORTHO05D006125 2.8e-125 452.2 269 81.0
PSO063G5899 Papaver somniferum HOM05D005139 ORTHO05D006125 3.6e-125 451.8 269 82.5
Actinidia12584 Actinidia chinensis HOM05D005139 ORTHO05D006125 4.7e-125 451.4 269 82.5
CiPaw.11G159600 Carya illinoinensis HOM05D005139 ORTHO05D006125 4.7e-125 451.4 269 82.5
Potri.001G389300 Populus trichocarpa HOM05D005139 ORTHO05D006125 4.7e-125 451.4 268 81.3
Eucgr.F01248 Eucalyptus grandis HOM05D005139 ORTHO05D006125 8.1e-125 450.7 269 80.7
Lsat_1_v5_gn_7_102480 Lactuca sativa HOM05D005139 ORTHO05D006125 1.1e-124 450.3 270 83.7
PSO782G2705 Papaver somniferum HOM05D005139 ORTHO05D006125 1.4e-124 449.9 269 82.5
CANSAT35G0508 Cannabis sativa HOM05D005139 ORTHO05D006125 1.8e-124 449.5 268 81.7
MELO3C008916.2 Cucumis melo HOM05D005139 ORTHO05D006125 2.4e-124 449.1 269 80.7
CsaV3_4G030530 Cucumis sativus L. HOM05D005139 ORTHO05D006125 2.4e-124 449.1 269 80.7
CAN.G443.5 Capsicum annuum HOM05D005139 ORTHO05D006125 4.0e-124 448.4 268 81.7
Cfa019555 Carpinus fangiana HOM05D005139 ORTHO05D006125 5.2e-124 448.0 268 82.1
Cc05_g10990 Coffea canephora HOM05D005139 ORTHO05D006125 2.0e-123 446.0 269 79.6
HanXRQChr15g0495211 Helianthus annuus HOM05D005139 ORTHO05D006125 2.0e-123 446.0 269 81.0
Aqoxy3G02037 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 5.8e-123 444.5 269 79.2
EL10Ac4g08361 Beta vulgaris HOM05D005139 ORTHO05D006125 9.9e-123 443.7 269 81.0
THA.LOC104812316 Tarenaya hassleriana HOM05D005139 ORTHO05D006125 1.3e-122 443.4 269 82.2
Nitab4.5_0007851g0020 Nicotiana tabacum HOM05D005139 ORTHO05D006125 1.7e-122 443.0 279 78.9
HanXRQChr11g0331031 Helianthus annuus HOM05D005139 ORTHO05D006125 4.9e-122 441.4 269 81.0
Ciclev10023690m.g Citrus clementina HOM05D005139 ORTHO05D006125 6.4e-122 441.0 269 81.0
COL.COLO4_17530 Corchorus olitorius HOM05D005139 ORTHO05D006125 6.4e-122 441.0 269 81.0
Aqoxy4G00276 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 8.4e-122 440.7 269 78.1
Thhalv10018370m.g Eutrema salsugineum HOM05D005139 ORTHO05D006125 8.4e-122 440.7 268 82.5
PGR083G0616 Punica granatum HOM05D005139 ORTHO05D006125 1.4e-121 439.9 268 80.2
A07p43980 Brassica napus HOM05D005139 ORTHO05D006125 5.4e-121 438.0 268 81.0
BraA07t31905Z Brassica rapa HOM05D005139 ORTHO05D006125 5.4e-121 438.0 268 81.0
Lj8A148G34 Lonicera japonica HOM05D005139 ORTHO05D006125 7.1e-121 437.6 291 76.3
Sp5g33790 Schrenkiella parvula HOM05D005139 ORTHO05D006125 9.3e-121 437.2 268 80.6
Aa31LG4G2260 Aethionema arabicum HOM05D005139 ORTHO05D006125 1.6e-120 436.4 268 81.3
RcHm_v2.0_Chr5g0030761 Rosa chinensis HOM05D005139 ORTHO05D006125 2.7e-120 435.6 268 78.0
BcaB03g16034 Brassica carinata HOM05D005139 ORTHO05D006125 3.5e-120 435.3 268 80.6
AUR62037557 Chenopodium quinoa HOM05D005139 ORTHO05D006125 3.5e-120 435.3 269 79.2
BcaC08g47457 Brassica carinata HOM05D005139 ORTHO05D006125 4.6e-120 434.9 268 80.6
C06p52650 Brassica napus HOM05D005139 ORTHO05D006125 4.6e-120 434.9 268 80.6
arahy.Tifrunner.gnm1.ann1.405FF9 Arachis hypogaea HOM05D005139 ORTHO05D006125 7.8e-120 434.1 270 81.5
QL08p026113 Quercus lobata HOM05D005139 ORTHO05D006125 7.8e-120 434.1 270 80.0
Sabra11G0096100 Salix brachista HOM05D005139 ORTHO05D006125 2.3e-119 432.6 295 73.9
CARHR072310 Cardamine hirsuta HOM05D005139 ORTHO05D006125 5.1e-119 431.4 268 81.0
ATR0127G028 Amborella trichopoda HOM05D005139 ORTHO05D006125 1.1e-118 430.3 269 77.3
AT1G78770 Arabidopsis thaliana HOM05D005139 ORTHO05D006125 1.1e-118 430.3 268 80.6
Hund10469 Selenicereus undatus HOM05D005139 ORTHO05D006125 1.5e-118 429.9 268 78.0
AL2G39160 Arabidopsis lyrata HOM05D005139 ORTHO05D006125 1.9e-118 429.5 268 80.6
FvH4_3g18210 Fragaria vesca HOM05D005139 ORTHO05D006125 7.3e-118 427.6 268 77.2
FAN16G0871 Fragaria x ananassa HOM05D005139 ORTHO05D006125 7.3e-118 427.6 268 77.2
Carub.0002s2560 Capsella rubella HOM05D005139 ORTHO05D006125 9.6e-118 427.2 268 79.9
DCAR_013162 Daucus carota HOM05D005139 ORTHO05D006125 2.1e-117 426.0 258 80.6
FAN21G0160 Fragaria x ananassa HOM05D005139 ORTHO05D006125 2.8e-117 425.6 267 77.2
FAN11G0516 Fragaria x ananassa HOM05D005139 ORTHO05D006125 6.2e-117 424.5 268 76.9
FAN25G1917 Fragaria x ananassa HOM05D005139 ORTHO05D006125 6.2e-117 424.5 268 76.9
SalBow7G0115 Salvia bowleyana HOM05D005139 ORTHO05D006125 8.1e-117 424.1 269 79.2
SalBow7G2844 Salvia bowleyana HOM05D005139 ORTHO05D006125 8.1e-117 424.1 269 79.2
MBI06_g15765_MAGBIO Magnolia biondii HOM05D005139 ORTHO05D006125 1.5e-115 419.9 261 78.5
Haze_09316 Corylus avellana HOM05D005139 ORTHO05D006125 4.4e-115 418.3 335 66.0
Sc03g0010570 Simmondsia chinensis HOM05D005139 ORTHO05D006125 5.4e-113 411.4 268 74.3
Ah.04g164210 Amaranthus hybridus HOM05D005139 ORTHO05D006125 1.7e-111 406.4 269 75.5
Nitab4.5_0000035g0250 Nicotiana tabacum HOM05D005139 ORTHO05D006125 1.7e-111 406.4 268 76.1
vmacro11947 Vaccinium macrocarpon HOM05D005139 ORTHO05D006125 1.7e-111 406.4 351 63.0
Migut.H02003 Erythranthe guttata HOM05D005139 ORTHO05D006125 5.6e-110 401.4 269 74.3
Os03g0236966 Oryza sativa ssp. japonica HOM05D005139 ORTHO05D006125 5.8e-107 391.3 268 69.8
Zm00001eb399210 Zea mays HOM05D005139 ORTHO05D006125 2.3e-103 379.4 268 69.0
Dinv15003 Davidia involucrata HOM05D005139 ORTHO05D006125 1.4e-97 360.1 208 85.6
SGA_v2.0_scaffold130G34288 Striga asiatica HOM05D005139 ORTHO05D006125 1.5e-94 350.1 269 69.5
Oeu005379.1 Olea europaea HOM05D005139 ORTHO05D006125 1.4e-92 343.6 269 68.0
MD00G1077100 Malus domestica HOM05D005139 ORTHO05D006125 6.1e-88 328.2 288 62.5
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 6.7e-87 324.7 254 66.5
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 9.0e-84 314.3 269 59.5
Prupe.4G162300 Prunus persica HOM05D005139 ORTHO05D006125 1.5e-83 313.5 187 79.7
Pp3c16_8790 Physcomitrium patens HOM05D005139 ORTHO05D006125 1.7e-82 310.1 268 56.3
AUR62019588 Chenopodium quinoa HOM05D005139 ORTHO05D006125 2.2e-82 309.7 269 62.1
SHI27616 Sapria himalayana HOM05D005139 ORTHO05D006125 9.7e-78 294.3 269 58.0
Mapoly0145s0019 Marchantia polymorpha HOM05D005139 ORTHO05D006125 3.4e-75 285.8 270 53.3
Ca_28352_v3 Cicer arietinum L. HOM05D005139 ORTHO05D006125 9.4e-73 277.7 155 92.3
C03p92750 Brassica napus HOM05D005139 ORTHO05D006125 2.8e-69 266.2 177 74.6
SMO244G0086 Selaginella moellendorffii HOM05D005139 ORTHO05D006125 1.0e-63 247.7 261 47.5
HPP92_004206 Vanilla planifolia HOM05D005139 ORTHO05D006125 3.0e-63 246.1 153 78.4
BolC6t40284H Brassica oleracea HOM05D005139 ORTHO05D006125 1.6e-59 233.8 140 83.6
Cpa.g.sc77.24 Carica papaya HOM05D005139 ORTHO05D006125 1.1e-57 227.6 128 88.3
Ciclev10023736m.g Citrus clementina HOM05D005139 ORTHO05D006125 8.8e-55 218.0 153 73.9
Ciclev10023923m.g Citrus clementina HOM05D005139 ORTHO05D006125 4.4e-54 215.7 153 73.2
AagrBONN_evm.TU.Sc2ySwM_368.2003 Anthoceros agrestis HOM05D005139 ORTHO05D006125 2.7e-51 206.5 232 47.4
MD03G1275700 Malus domestica HOM05D005139 ORTHO05D006125 1.1e-49 201.1 154 66.9
CBR_g50375 Chara braunii HOM05D005139 ORTHO05D006125 2.3e-47 193.4 163 57.7
Aqoxy256s002 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 1.6e-43 180.6 110 81.8
Ca_19229_v3 Cicer arietinum L. HOM05D005139 ORTHO05D006125 2.3e-42 176.8 94 85.1
SEGI_23856 Sequoiadendron giganteum HOM05D005139 ORTHO05D006125 2.1e-40 170.2 115 67.8
MD03G1275800 Malus domestica HOM05D005139 ORTHO05D006125 4.1e-36 156.0 85 90.6
PRCOL_00005307 Prasinoderma coloniale HOM05D005139 ORTHO05D006125 2.3e-34 150.2 331 32.9
MCO01G684 Micromonas commoda HOM05D005139 ORTHO05D006125 3.9e-34 149.4 353 30.3
Zm00001eb010020 Zea mays HOM05D005139 ORTHO05D006125 7.3e-33 145.2 104 63.5
Potri.001G389500 Populus trichocarpa HOM05D005139 ORTHO05D006125 4.0e-31 139.4 89 69.7
RcHm_v2.0_Chr1g0337671 Rosa chinensis HOM05D005139 ORTHO05D006125 5.2e-31 139.0 87 71.3
Cre13.g562950 Chlamydomonas reinhardtii HOM05D005139 ORTHO05D006125 4.4e-30 136.0 195 35.9
RcHm_v2.0_Chr3g0469831 Rosa chinensis HOM05D005139 ORTHO05D006125 1.8e-23 114.0 139 46.8
CBR_g50377 Chara braunii HOM05D005139 ORTHO05D006125 5.8e-14 82.4 95 45.3
Cfa023795 Carpinus fangiana HOM05D005139 ORTHO05D006125 6.4e-13 79.0 279 23.3
ClCG07G010240 Citrullus lanatus HOM05D005139 ORTHO05D006125 4.4e-06 56.2 70 51.4


User provided reference genes

Program Settings