Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5770 Trifolium pratense HOM05D000415 ORTHO05D016177 3.2e-75 285.0 145 100.0
TPR.G10830 Trifolium pratense HOM05D000415 ORTHO05D016177 3.0e-25 119.0 67 88.1
CiPaw.02G127800 Carya illinoinensis HOM05D000415 ORTHO05D002017 6.3e-07 58.2 47 63.8
Lj5g0014607 Lotus japonicus HOM05D000415 ORTHO05D002017 6.3e-07 58.2 47 63.8
Lj5g0025126 Lotus japonicus HOM05D000415 ORTHO05D002017 6.3e-07 58.2 47 63.8
TPR.G13391 Trifolium pratense HOM05D000415 ORTHO05D002017 8.2e-07 57.8 47 66.0
Medtr1g090140 Medicago truncatula HOM05D000415 ORTHO05D002017 1.1e-06 57.4 47 66.0
Psat6g170600 Pisum sativum HOM05D000415 ORTHO05D002017 1.1e-06 57.4 47 66.0
Zm00001eb046580 Zea mays HOM05D000415 ORTHO05D002017 1.1e-06 57.4 47 66.0
arahy.Tifrunner.gnm1.ann1.79AEK5 Arachis hypogaea HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
arahy.Tifrunner.gnm1.ann1.IG0WB5 Arachis hypogaea HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
arahy.Tifrunner.gnm1.ann1.NEHI9Z Arachis hypogaea HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
arahy.Tifrunner.gnm1.ann1.T6NT17 Arachis hypogaea HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
CiPaw.01G206100 Carya illinoinensis HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 61.7
Ca_10366_v3 Cicer arietinum L. HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Glyma.10G127800 Glycine max HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Glyma.10G193200 Glycine max HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Glyma.20G079300 Glycine max HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Glyma.20G197100 Glycine max HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Lalb_Chr03g0036801 Lupinus albus HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Lalb_Chr06g0169791 Lupinus albus HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Lalb_Chr21g0312691 Lupinus albus HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Phvul.007G135100 Phaseolus vulgaris HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Phvul.007G238500 Phaseolus vulgaris HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Psat6g170800 Pisum sativum HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
TPR.G13389 Trifolium pratense HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
TPR.G17702 Trifolium pratense HOM05D000415 ORTHO05D016177 1.4e-06 57.0 30 93.3
VMungo0720G1756 Vigna mungo HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
VMungo0720G3027 Vigna mungo HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
Zm00001eb222300 Zea mays HOM05D000415 ORTHO05D002017 1.4e-06 57.0 47 63.8
QL06p022681 Quercus lobata HOM05D000415 ORTHO05D002017 1.8e-06 56.6 47 61.7
TAR365G0603 Trochodendron aralioides HOM05D000415 ORTHO05D002017 1.8e-06 56.6 47 59.6
Haze_11536 Corylus avellana HOM05D000415 ORTHO05D002017 2.4e-06 56.2 47 61.7
ATR0693G255 Amborella trichopoda HOM05D000415 ORTHO05D002017 3.1e-06 55.8 47 61.7
Lalb_Chr19g0128631 Lupinus albus HOM05D000415 ORTHO05D002017 3.1e-06 55.8 47 61.7
Aqoxy2G03812 Aquilegia oxysepala HOM05D000415 ORTHO05D002017 5.3e-06 55.1 47 61.7
CAN.G305.15 Capsicum annuum HOM05D000415 ORTHO05D002017 5.3e-06 55.1 47 63.8
Ca_11595_v3 Cicer arietinum L. HOM05D000415 ORTHO05D002017 5.3e-06 55.1 47 61.7
HanXRQChr02g0059441 Helianthus annuus HOM05D000415 ORTHO05D002017 5.3e-06 55.1 47 63.8
Medtr1g090130 Medicago truncatula HOM05D000415 ORTHO05D002017 5.3e-06 55.1 47 61.7
Potri.001G054400 Populus trichocarpa HOM05D000415 ORTHO05D002017 5.3e-06 55.1 47 59.6
Sabra01G0038900 Salix brachista HOM05D000415 ORTHO05D002017 5.3e-06 55.1 47 59.6
SGA_v2.0_scaffold57G20165 Striga asiatica HOM05D000415 ORTHO05D002017 5.3e-06 55.1 47 63.8
THA.LOC104821623 Tarenaya hassleriana HOM05D000415 ORTHO05D002017 5.3e-06 55.1 47 61.7
unitig_748.g8288 Utricularia gibba HOM05D000415 ORTHO05D002017 5.3e-06 55.1 47 63.8
CSS0043610 Camellia sinensis var. sinensis HOM05D000415 ORTHO05D002017 6.9e-06 54.7 47 61.7
Duzib151G0241 Durio zibethinus HOM05D000415 ORTHO05D002017 6.9e-06 54.7 47 61.7
Lj3A599G46 Lonicera japonica HOM05D000415 ORTHO05D002017 6.9e-06 54.7 47 61.7
Oeu022323.1 Olea europaea HOM05D000415 ORTHO05D002017 6.9e-06 54.7 47 61.7
Oeu053306.1 Olea europaea HOM05D000415 ORTHO05D002017 6.9e-06 54.7 47 61.7
GSVIVG01029025001 Vitis vinifera HOM05D000415 ORTHO05D002017 6.9e-06 54.7 47 61.7
CSS0000706 Camellia sinensis var. sinensis HOM05D000415 ORTHO05D002017 9.1e-06 54.3 47 61.7
CAN.G1588.3 Capsicum annuum HOM05D000415 ORTHO05D002017 9.1e-06 54.3 47 59.6
Mapoly0144s0025 Marchantia polymorpha HOM05D000415 ORTHO05D002017 9.1e-06 54.3 47 57.4


User provided reference genes

Program Settings