Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5571 Trifolium pratense HOM05D000053 ORTHO05D036766 1.2e-65 253.4 166 100.0
Medtr8g007355 Medicago truncatula HOM05D000053 ORTHO05D036766 1.1e-18 97.4 112 76.8
Medtr4g018940 Medicago truncatula HOM05D000053 ORTHO05D000448 1.2e-14 84.0 139 41.0
Glyma.03G066500 Glycine max HOM05D000053 ORTHO05D000448 2.1e-14 83.2 158 59.5
Lj3g0023745 Lotus japonicus HOM05D000053 ORTHO05D000448 2.1e-14 83.2 147 59.9
Glyma.03G054800 Glycine max HOM05D000053 ORTHO05D000448 2.7e-14 82.8 164 54.9
Phvul.010G073300 Phaseolus vulgaris HOM05D000053 ORTHO05D000448 2.7e-14 82.8 116 66.4
Psat7g243640 Pisum sativum HOM05D000053 ORTHO05D000448 1.0e-13 80.9 143 36.4
Lj3g0000412 Lotus japonicus HOM05D000053 ORTHO05D000448 1.4e-13 80.5 115 68.7
Medtr4g017720 Medicago truncatula HOM05D000053 ORTHO05D000448 2.3e-13 79.7 159 54.1
Psat7g244000 Pisum sativum HOM05D000053 ORTHO05D000448 2.3e-13 79.7 114 65.8
Glyma.03G052400 Glycine max HOM05D000053 ORTHO05D000448 3.9e-13 79.0 114 53.5
Ca_06112_v3 Cicer arietinum L. HOM05D000053 ORTHO05D000448 6.7e-13 78.2 141 56.7
Medtr4g017700 Medicago truncatula HOM05D000053 ORTHO05D000448 8.8e-13 77.8 141 56.0
VMungo0331G1621 Vigna mungo HOM05D000053 ORTHO05D000448 8.8e-13 77.8 115 64.3
VMungo0331G1961 Vigna mungo HOM05D000053 ORTHO05D000448 1.5e-12 77.0 114 64.9
VMungo0331G1271 Vigna mungo HOM05D000053 ORTHO05D000448 4.3e-12 75.5 114 53.5
Lj2g0002400 Lotus japonicus HOM05D000053 ORTHO05D000448 8.2e-11 71.2 166 36.7
Lj2g0014060 Lotus japonicus HOM05D000053 ORTHO05D000448 2.4e-10 69.7 114 59.6
Medtr4g017710 Medicago truncatula HOM05D000053 ORTHO05D000448 1.2e-09 67.4 142 53.5
arahy.Tifrunner.gnm1.ann1.G5MJIA Arachis hypogaea HOM05D000053 ORTHO05D000448 1.5e-09 67.0 128 37.5
Medtr4g017780 Medicago truncatula HOM05D000053 ORTHO05D000448 2.6e-09 66.2 167 47.3
TAR636G2098 Trochodendron aralioides HOM05D000053 ORTHO05D000448 2.6e-09 66.2 159 52.2
TPR.G8189 Trifolium pratense HOM05D000053 ORTHO05D000448 5.9e-09 65.1 144 49.3
FAN02G3661 Fragaria x ananassa HOM05D000053 ORTHO05D000448 7.7e-09 64.7 139 59.0
QL07p034975 Quercus lobata HOM05D000053 ORTHO05D000448 1.0e-08 64.3 137 54.7
TPR.G31730 Trifolium pratense HOM05D000053 ORTHO05D000448 1.3e-08 63.9 99 72.7
TPR.G30847 Trifolium pratense HOM05D000053 ORTHO05D000448 1.7e-08 63.5 115 60.9
QL11p003782 Quercus lobata HOM05D000053 ORTHO05D000448 3.8e-08 62.4 137 57.7
Ca_20199_v3 Cicer arietinum L. HOM05D000053 ORTHO05D000448 5.0e-08 62.0 135 53.3
Lj2g0024166 Lotus japonicus HOM05D000053 ORTHO05D000448 5.0e-08 62.0 112 65.2
TPR.G8195 Trifolium pratense HOM05D000053 ORTHO05D000448 5.0e-08 62.0 108 39.8
Glyma.01G126900 Glycine max HOM05D000053 ORTHO05D000448 1.1e-07 60.8 205 44.9
Medtr4g018910 Medicago truncatula HOM05D000053 ORTHO05D000448 1.1e-07 60.8 100 45.0
Medtr4g019030 Medicago truncatula HOM05D000053 ORTHO05D000448 1.1e-07 60.8 182 44.0
RcHm_v2.0_Chr3g0462001 Rosa chinensis HOM05D000053 ORTHO05D000448 1.9e-07 60.1 160 49.4
TPR.G8207 Trifolium pratense HOM05D000053 ORTHO05D000448 1.9e-07 60.1 101 65.3
Medtr4g019010 Medicago truncatula HOM05D000053 ORTHO05D000448 2.5e-07 59.7 110 59.1
FvH4_6g11080 Fragaria vesca HOM05D000053 ORTHO05D000448 4.2e-07 58.9 137 56.9
Dinv18518 Davidia involucrata HOM05D000053 ORTHO05D000448 5.5e-07 58.5 144 56.2
Duzib212G0932 Durio zibethinus HOM05D000053 ORTHO05D000448 5.5e-07 58.5 144 31.9
Medtr4g017730 Medicago truncatula HOM05D000053 ORTHO05D000448 5.5e-07 58.5 147 49.7
QL07p034530 Quercus lobata HOM05D000053 ORTHO05D000448 5.5e-07 58.5 141 53.9
Medtr4g017640 Medicago truncatula HOM05D000053 ORTHO05D000448 7.2e-07 58.2 141 51.1
Glyma.18G204500 Glycine max HOM05D000053 ORTHO05D000448 9.4e-07 57.8 143 49.0
PSO017G3677 Papaver somniferum HOM05D000053 ORTHO05D000448 9.4e-07 57.8 79 46.8
Peaxi162Scf00434g00042 Petunia axillaris HOM05D000053 ORTHO05D000448 9.4e-07 57.8 143 51.0
Ca_20133_v3 Cicer arietinum L. HOM05D000053 ORTHO05D000448 1.2e-06 57.4 114 64.0
arahy.Tifrunner.gnm1.ann1.KS7FXQ Arachis hypogaea HOM05D000053 ORTHO05D000448 1.6e-06 57.0 110 60.9
Duzib212G1040 Durio zibethinus HOM05D000053 ORTHO05D000448 2.7e-06 56.2 176 29.5
RcHm_v2.0_Chr6g0257231 Rosa chinensis HOM05D000053 ORTHO05D000448 2.7e-06 56.2 137 50.4
TPR.G5597 Trifolium pratense HOM05D000053 ORTHO05D000448 2.7e-06 56.2 159 51.6
Actinidia11565 Actinidia chinensis HOM05D000053 ORTHO05D000448 3.6e-06 55.8 138 31.2
Haze_24137 Corylus avellana HOM05D000053 ORTHO05D000448 3.6e-06 55.8 150 34.0
FAN09G2462 Fragaria x ananassa HOM05D000053 ORTHO05D000448 3.6e-06 55.8 139 56.8
Lj5C618T1 Lonicera japonica HOM05D000053 ORTHO05D000448 3.6e-06 55.8 175 49.1
Nitab4.5_0006118g0030 Nicotiana tabacum HOM05D000053 ORTHO05D000448 3.6e-06 55.8 147 47.6
GSVIVG01030335001 Vitis vinifera HOM05D000053 ORTHO05D000448 3.6e-06 55.8 163 47.9
CAN.G1134.10 Capsicum annuum HOM05D000053 ORTHO05D000448 4.7e-06 55.5 143 49.7
Eucgr.A00704 Eucalyptus grandis HOM05D000053 ORTHO05D000448 4.7e-06 55.5 139 52.5
Glyma.18G204400 Glycine max HOM05D000053 ORTHO05D000448 4.7e-06 55.5 143 52.4
Lj2g0007694 Lotus japonicus HOM05D000053 ORTHO05D000448 4.7e-06 55.5 49 61.2
Medtr4g017310 Medicago truncatula HOM05D000053 ORTHO05D000448 4.7e-06 55.5 149 48.3
QL03p070489 Quercus lobata HOM05D000053 ORTHO05D000035 4.7e-06 55.5 129 49.6
ClCG10G022360 Citrullus lanatus HOM05D000053 ORTHO05D000448 7.9e-06 54.7 159 33.3
Sopen01g042220 Solanum pennellii HOM05D000053 ORTHO05D000448 7.9e-06 54.7 143 50.3


User provided reference genes

Program Settings