Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 2.1e-112 409.1 210 100.0
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 4.5e-99 364.8 210 89.0
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 5.7e-94 347.8 210 89.5
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 6.8e-87 324.3 210 82.4
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 6.4e-85 317.8 211 81.5
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 3.9e-82 308.5 211 78.7
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 8.6e-82 307.4 211 79.6
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 2.5e-81 305.8 211 78.2
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 3.6e-80 302.0 212 75.9
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 3.6e-80 302.0 212 75.9
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 3.6e-80 302.0 211 77.7
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.4e-76 290.0 212 74.1
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 3.4e-70 268.9 224 67.9
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 3.3e-65 252.3 212 67.0
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 3.6e-64 248.8 212 66.5
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 1.5e-62 243.4 185 71.9
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 1.5e-62 243.4 184 73.4
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 4.4e-62 241.9 214 65.4
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 7.6e-62 241.1 211 64.9
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 1.7e-61 240.0 208 65.4
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 2.2e-61 239.6 211 65.4
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.7e-58 229.9 182 68.7
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 2.3e-58 229.6 184 67.4
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 3.9e-58 228.8 211 62.1
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.1e-57 227.3 212 62.7
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 4.3e-57 225.3 145 80.0
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 1.3e-56 223.8 189 66.7
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 3.6e-56 222.2 188 65.4
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 6.2e-56 221.5 210 59.5
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 6.2e-56 221.5 185 64.3
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 1.4e-55 220.3 213 60.6
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.8e-55 219.9 206 61.2
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 3.1e-55 219.2 174 69.0
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 4.0e-55 218.8 218 61.5
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 1.2e-54 217.2 210 59.5
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 1.2e-54 217.2 213 58.7
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 1.5e-54 216.9 165 69.1
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 1.5e-54 216.9 183 65.0
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 2.0e-54 216.5 182 65.4
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 2.0e-54 216.5 212 59.9
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 2.6e-54 216.1 212 59.0
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 3.4e-54 215.7 184 66.8
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 5.8e-54 214.9 185 64.3
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 5.8e-54 214.9 210 57.6
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 5.8e-54 214.9 168 71.4
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 1.7e-53 213.4 211 59.2
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 2.2e-53 213.0 212 58.0
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 8.4e-53 211.1 202 59.9
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 1.1e-52 210.7 187 62.0
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 3.2e-52 209.1 241 53.9
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 3.2e-52 209.1 188 63.8
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 9.3e-52 207.6 188 63.3
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 9.3e-52 207.6 215 57.7
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 2.1e-51 206.5 179 63.7
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 3.5e-51 205.7 172 65.7
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 4.6e-51 205.3 192 60.4
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 6.0e-51 204.9 185 62.7
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 6.0e-51 204.9 167 63.5
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 1.0e-50 204.1 184 62.0
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 1.3e-50 203.8 185 63.2
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 1.7e-50 203.4 187 60.4
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 2.3e-50 203.0 167 65.9
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.3e-50 203.0 167 65.9
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 3.9e-50 202.2 188 61.2
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 6.6e-50 201.4 183 61.2
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 1.5e-49 200.3 183 63.4
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 1.5e-49 200.3 185 62.2
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 2.5e-49 199.5 183 61.7
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.5e-49 199.5 167 64.7
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 4.3e-49 198.7 183 62.3
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 4.3e-49 198.7 216 58.8
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 7.3e-49 198.0 182 61.5
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 7.3e-49 198.0 186 60.8
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 7.3e-49 198.0 209 61.2
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 7.3e-49 198.0 171 64.9
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 1.3e-48 197.2 156 66.0
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 1.3e-48 197.2 183 61.7
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 2.1e-48 196.4 183 61.2
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 2.8e-48 196.1 189 58.2
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 4.8e-48 195.3 156 65.4
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.8e-48 195.3 152 67.1
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 1.1e-47 194.1 140 70.7
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.4e-47 193.7 182 61.5
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 1.8e-47 193.4 204 56.9
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 1.8e-47 193.4 186 59.7
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 1.8e-47 193.4 182 61.5
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.2e-46 190.7 182 61.0
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 2.6e-46 189.5 173 61.3
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 1.3e-45 187.2 137 71.5
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 1.3e-45 187.2 168 62.5
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 1.1e-44 184.1 177 60.5
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 2.4e-44 183.0 137 69.3
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 2.1e-43 179.9 178 60.1
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 3.5e-43 179.1 171 57.3
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 1.0e-42 177.6 129 72.1
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 5.1e-42 175.3 164 59.8
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 6.7e-42 174.9 125 73.6
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 8.7e-42 174.5 155 61.9
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 2.6e-38 162.9 189 52.4
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 5.7e-33 145.2 133 60.9
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 5.7e-33 145.2 139 54.0
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.3e-32 144.1 101 75.2
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 2.6e-30 136.3 138 51.4
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 2.5e-28 129.8 136 49.3
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 1.6e-24 117.1 129 45.7
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 1.4e-23 114.0 105 60.0
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 1.4e-23 114.0 91 61.5
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 4.2e-20 102.4 70 74.3
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 1.1e-17 94.4 91 54.9
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 3.1e-07 59.7 108 33.3


User provided reference genes

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