Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5518 Trifolium pratense HOM05D004835 ORTHO05D006046 1.8e-187 659.1 333 100.0
Medtr1g105545 Medicago truncatula HOM05D004835 ORTHO05D006046 1.6e-151 539.7 386 76.7
Ca_10985_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 2.8e-151 538.9 384 77.9
Ca_11005_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 2.8e-151 538.9 384 77.9
Psat6g210360 Pisum sativum HOM05D004835 ORTHO05D006046 9.9e-149 530.4 387 75.5
Lj5g0006944 Lotus japonicus HOM05D004835 ORTHO05D006046 2.5e-128 462.6 388 66.0
Glyma.10G252300 Glycine max HOM05D004835 ORTHO05D006046 1.3e-127 460.3 385 65.5
Glyma.20G141100 Glycine max HOM05D004835 ORTHO05D006046 1.6e-127 459.9 385 65.5
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea HOM05D004835 ORTHO05D006046 2.2e-124 449.5 392 63.0
VMungo0720G3178 Vigna mungo HOM05D004835 ORTHO05D006046 1.1e-123 447.2 385 64.4
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea HOM05D004835 ORTHO05D006046 1.4e-123 446.8 392 62.5
Lalb_Chr02g0144591 Lupinus albus HOM05D004835 ORTHO05D006046 1.8e-121 439.9 385 63.9
Phvul.007G051900 Phaseolus vulgaris HOM05D004835 ORTHO05D006046 4.8e-119 431.8 385 62.1
Atru.chr10.2145 Acer truncatum HOM05D004835 ORTHO05D006046 6.9e-110 401.4 375 59.5
COL.COLO4_31722 Corchorus olitorius HOM05D004835 ORTHO05D006046 9.1e-110 401.0 369 59.3
PGR004G0955 Punica granatum HOM05D004835 ORTHO05D006046 3.4e-109 399.1 360 61.1
Prupe.4G026400 Prunus persica HOM05D004835 ORTHO05D006046 2.2e-108 396.4 384 58.9
QL05p075217 Quercus lobata HOM05D004835 ORTHO05D006046 2.2e-108 396.4 368 59.0
Lj1A1224G37 Lonicera japonica HOM05D004835 ORTHO05D006046 2.9e-108 396.0 369 61.0
Thecc.06G213800 Theobroma cacao HOM05D004835 ORTHO05D006046 2.9e-108 396.0 357 61.3
Ciclev10015558m.g Citrus clementina HOM05D004835 ORTHO05D006046 5.0e-108 395.2 379 59.1
CANSAT56G3094 Cannabis sativa HOM05D004835 ORTHO05D006046 6.5e-108 394.8 360 61.7
CiPaw.10G068200 Carya illinoinensis HOM05D004835 ORTHO05D006046 6.5e-108 394.8 355 61.1
Gohir.D06G151600 Gossypium hirsutum HOM05D004835 ORTHO05D006046 8.5e-108 394.4 350 61.7
Manes.16G012700 Manihot esculenta HOM05D004835 ORTHO05D006046 8.5e-108 394.4 359 60.7
Potri.004G022900 Populus trichocarpa HOM05D004835 ORTHO05D006046 1.1e-107 394.0 359 61.8
Gorai.010G176900 Gossypium raimondii HOM05D004835 ORTHO05D006046 5.5e-107 391.7 358 60.1
Gohir.A06G145700 Gossypium hirsutum HOM05D004835 ORTHO05D006046 9.4e-107 391.0 358 60.6
Sabra04G0012600 Salix brachista HOM05D004835 ORTHO05D006046 9.4e-107 391.0 375 59.2
Haze_06733 Corylus avellana HOM05D004835 ORTHO05D006046 1.6e-106 390.2 348 61.5
MD05G1340900 Malus domestica HOM05D004835 ORTHO05D006046 6.1e-106 388.3 388 57.5
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla HOM05D004835 ORTHO05D006046 7.9e-106 387.9 356 60.4
Eucgr.D00815 Eucalyptus grandis HOM05D004835 ORTHO05D006046 1.0e-105 387.5 377 57.6
TAR626G1121 Trochodendron aralioides HOM05D004835 ORTHO05D006046 1.0e-105 387.5 367 59.1
CsaV3_1G011070 Cucumis sativus L. HOM05D004835 ORTHO05D006046 1.8e-105 386.7 370 57.8
Actinidia26949 Actinidia chinensis HOM05D004835 ORTHO05D006046 3.0e-105 386.0 352 59.7
MELO3C002484.2 Cucumis melo HOM05D004835 ORTHO05D006046 8.8e-105 384.4 378 55.8
Peaxi162Scf00678g00310 Petunia axillaris HOM05D004835 ORTHO05D006046 1.5e-104 383.6 327 63.0
Haze_06737 Corylus avellana HOM05D004835 ORTHO05D006046 3.3e-104 382.5 387 56.8
Duzib235G1297 Durio zibethinus HOM05D004835 ORTHO05D006046 3.3e-104 382.5 345 60.0
RcHm_v2.0_Chr5g0004011 Rosa chinensis HOM05D004835 ORTHO05D006046 4.4e-104 382.1 368 57.9
Cfa000278 Carpinus fangiana HOM05D004835 ORTHO05D006046 5.7e-104 381.7 387 56.8
ClCG03G004990 Citrullus lanatus HOM05D004835 ORTHO05D006046 4.8e-103 378.6 370 56.5
Nn1g07024 Nelumbo nucifera HOM05D004835 ORTHO05D006046 8.2e-103 377.9 359 58.8
Cpa.g.sc198.3 Carica papaya HOM05D004835 ORTHO05D006046 3.1e-102 375.9 357 58.8
Rhsim13G0157800 Rhododendron simsii HOM05D004835 ORTHO05D006046 3.1e-102 375.9 370 57.0
TWI63G0472 Tripterygium wilfordii HOM05D004835 ORTHO05D006046 3.1e-102 375.9 361 58.4
CSS0008490 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 5.3e-102 375.2 358 57.8
Lj2A274G58 Lonicera japonica HOM05D004835 ORTHO05D006046 5.3e-102 375.2 322 62.1
DCAR_008123 Daucus carota HOM05D004835 ORTHO05D006046 1.2e-101 374.0 342 60.2
FAN25G1333 Fragaria x ananassa HOM05D004835 ORTHO05D006046 1.2e-101 374.0 357 57.4
Nitab4.5_0003738g0050 Nicotiana tabacum HOM05D004835 ORTHO05D006046 1.2e-101 374.0 358 59.2
GSVIVG01012626001 Vitis vinifera HOM05D004835 ORTHO05D006046 1.2e-101 374.0 248 74.6
FvH4_3g02680 Fragaria vesca HOM05D004835 ORTHO05D006046 4.5e-101 372.1 357 57.4
PSO541G2305 Papaver somniferum HOM05D004835 ORTHO05D006046 4.5e-101 372.1 394 54.1
vmacro03709 Vaccinium macrocarpon HOM05D004835 ORTHO05D006046 4.5e-101 372.1 363 56.7
AUR62022016 Chenopodium quinoa HOM05D004835 ORTHO05D006046 1.0e-100 370.9 348 58.6
EL10Ac8g19899 Beta vulgaris HOM05D004835 ORTHO05D006046 1.3e-100 370.5 352 58.0
Dinv17835 Davidia involucrata HOM05D004835 ORTHO05D006046 1.3e-100 370.5 248 74.6
Nitab4.5_0006795g0010 Nicotiana tabacum HOM05D004835 ORTHO05D006046 1.3e-100 370.5 358 58.7
Sed0001374 Sechium edule HOM05D004835 ORTHO05D006046 1.7e-100 370.2 394 52.3
PSO675G0743 Papaver somniferum HOM05D004835 ORTHO05D006046 2.9e-100 369.4 381 55.4
Hund21377 Selenicereus undatus HOM05D004835 ORTHO05D006046 2.9e-100 369.4 358 58.1
CDE05G0674 Ceratophyllum demersum HOM05D004835 ORTHO05D006046 5.0e-100 368.6 366 54.9
Migut.H01551 Erythranthe guttata HOM05D004835 ORTHO05D006046 1.9e-99 366.7 360 57.8
Aqoxy4G01996 Aquilegia oxysepala HOM05D004835 ORTHO05D006046 4.2e-99 365.5 368 56.2
Solyc10g005370.3 Solanum lycopersicum HOM05D004835 ORTHO05D006046 4.2e-99 365.5 374 54.0
Sopen10g001360 Solanum pennellii HOM05D004835 ORTHO05D006046 4.2e-99 365.5 374 54.0
Cc00_g17920 Coffea canephora HOM05D004835 ORTHO05D006046 9.4e-99 364.4 248 72.2
Cpa.g.sc198.4 Carica papaya HOM05D004835 ORTHO05D006046 2.1e-98 363.2 247 71.7
MBI02_g10099_MAGBIO Magnolia biondii HOM05D004835 ORTHO05D006046 3.6e-98 362.5 377 54.6
ATR0762G046 Amborella trichopoda HOM05D004835 ORTHO05D006046 6.1e-98 361.7 358 56.4
PGSC0003DMG400011280 Solanum tuberosum HOM05D004835 ORTHO05D006046 8.0e-98 361.3 356 55.9
CAN.G105.1 Capsicum annuum HOM05D004835 ORTHO05D006046 2.3e-97 359.8 370 54.3
Oeu030985.2 Olea europaea HOM05D004835 ORTHO05D006046 2.3e-97 359.8 390 53.3
Lsat_1_v5_gn_7_16981 Lactuca sativa HOM05D004835 ORTHO05D006046 2.0e-96 356.7 365 55.1
HanXRQChr05g0130051 Helianthus annuus HOM05D004835 ORTHO05D006046 4.4e-96 355.5 358 55.6
ECA236G4143 Erigeron canadensis HOM05D004835 ORTHO05D006046 9.7e-96 354.4 366 55.5
SGA_v2.0_scaffold49G18268 Striga asiatica HOM05D004835 ORTHO05D006046 9.7e-96 354.4 248 71.4
SalBow1G4699 Salvia bowleyana HOM05D004835 ORTHO05D006046 7.0e-94 348.2 249 70.7
Sc05g0008870 Simmondsia chinensis HOM05D004835 ORTHO05D006046 1.2e-93 347.4 346 55.2
HPP92_010092 Vanilla planifolia HOM05D004835 ORTHO05D006046 2.6e-93 346.3 366 51.9
MSTRG.13160 Avicennia marina HOM05D004835 ORTHO05D006046 3.8e-92 342.4 368 53.3
Ah.09g235350 Amaranthus hybridus HOM05D004835 ORTHO05D006046 6.5e-92 341.7 350 52.9
THA.LOC104812524 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 8.5e-92 341.3 350 54.0
HPP92_010083 Vanilla planifolia HOM05D004835 ORTHO05D006046 5.5e-91 338.6 247 66.4
THA.LOC104821035 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 1.6e-90 337.0 362 53.3
Os07g0530600 Oryza sativa ssp. japonica HOM05D004835 ORTHO05D006046 8.0e-90 334.7 361 51.8
SEGI_26962 Sequoiadendron giganteum HOM05D004835 ORTHO05D006046 8.0e-90 334.7 312 57.7
AL7G32900 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 1.8e-89 333.6 373 49.1
CARHR227800 Cardamine hirsuta HOM05D004835 ORTHO05D006046 1.8e-89 333.6 381 49.1
HanXRQChr01g0002521 Helianthus annuus HOM05D004835 ORTHO05D006046 3.0e-89 332.8 359 53.8
AT4G21210 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 4.0e-89 332.4 373 49.6
Sp3g00900 Schrenkiella parvula HOM05D004835 ORTHO05D006046 4.0e-89 332.4 355 54.4
Zm00001eb323140 Zea mays HOM05D004835 ORTHO05D006046 4.0e-89 332.4 358 51.4
unitig_26.g9396 Utricularia gibba HOM05D004835 ORTHO05D006046 5.2e-89 332.0 375 49.6
Carub.0007s2021 Capsella rubella HOM05D004835 ORTHO05D006046 1.2e-88 330.9 397 47.6
Thhalv10025354m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 1.2e-88 330.9 374 48.9
Lsat_1_v5_gn_1_125320 Lactuca sativa HOM05D004835 ORTHO05D006046 3.4e-88 329.3 365 51.5
AT3G01200 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 4.4e-88 328.9 377 53.3
unitig_749.g13624 Utricularia gibba HOM05D004835 ORTHO05D006046 5.7e-88 328.6 365 50.7
Zm00001eb106240 Zea mays HOM05D004835 ORTHO05D006046 7.5e-88 328.2 248 66.1
Carub.0003s0094 Capsella rubella HOM05D004835 ORTHO05D006046 1.3e-87 327.4 364 52.5
Sp7g19300 Schrenkiella parvula HOM05D004835 ORTHO05D006046 1.3e-87 327.4 368 50.3
AL3G11040 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 6.3e-87 325.1 366 52.7
ECA248G0073 Erigeron canadensis HOM05D004835 ORTHO05D006046 6.3e-87 325.1 323 54.2
Aa31LG6G3230 Aethionema arabicum HOM05D004835 ORTHO05D006046 1.4e-86 323.9 369 51.5
MSTRG.14649 Avicennia marina HOM05D004835 ORTHO05D006046 1.8e-86 323.6 366 50.3
Nn1g03640 Nelumbo nucifera HOM05D004835 ORTHO05D006046 3.1e-86 322.8 371 49.9
Aa31LG5G12420 Aethionema arabicum HOM05D004835 ORTHO05D006046 4.1e-86 322.4 249 65.1
Hund23515 Selenicereus undatus HOM05D004835 ORTHO05D006046 1.2e-85 320.9 315 56.2
BraA01t01201Z Brassica rapa HOM05D004835 ORTHO05D006046 2.0e-85 320.1 351 51.9
BcaNung03833 Brassica carinata HOM05D004835 ORTHO05D006046 2.7e-85 319.7 355 50.1
Thhalv10020923m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 7.7e-85 318.2 381 51.4
BcaC05g30485 Brassica carinata HOM05D004835 ORTHO05D006046 1.7e-84 317.0 358 52.0
CARHR075840 Cardamine hirsuta HOM05D004835 ORTHO05D006046 1.7e-84 317.0 341 53.1
A01p12580 Brassica napus HOM05D004835 ORTHO05D006046 2.2e-84 316.6 246 64.6
C01p15150 Brassica napus HOM05D004835 ORTHO05D006046 6.5e-84 315.1 352 51.7
BolC1t01464H Brassica oleracea HOM05D004835 ORTHO05D006046 6.5e-84 315.1 352 51.7
Pp3c11_19190 Physcomitrium patens HOM05D004835 ORTHO05D006046 1.1e-83 314.3 365 47.1
C09p75340 Brassica napus HOM05D004835 ORTHO05D006046 9.4e-83 311.2 357 51.5
BolC5t35125H Brassica oleracea HOM05D004835 ORTHO05D006046 9.4e-83 311.2 357 51.5
BcaC09g51244 Brassica carinata HOM05D004835 ORTHO05D006046 1.2e-82 310.8 352 51.4
BraA01t04644Z Brassica rapa HOM05D004835 ORTHO05D006046 1.2e-82 310.8 347 51.9
A05p44760 Brassica napus HOM05D004835 ORTHO05D006046 2.1e-82 310.1 358 51.1
BraA05t23181Z Brassica rapa HOM05D004835 ORTHO05D006046 2.1e-82 310.1 358 51.1
BcaB04g21426 Brassica carinata HOM05D004835 ORTHO05D006046 3.6e-82 309.3 347 52.2
BcaC05g30395 Brassica carinata HOM05D004835 ORTHO05D006046 3.6e-82 309.3 357 51.3
Mapoly0141s0024 Marchantia polymorpha HOM05D004835 ORTHO05D006046 3.6e-82 309.3 372 48.4
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus HOM05D004835 ORTHO05D006046 4.7e-82 308.9 347 51.6
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus HOM05D004835 ORTHO05D006046 1.4e-81 307.4 347 51.6
BolC1t05939H Brassica oleracea HOM05D004835 ORTHO05D006046 8.8e-81 304.7 347 51.0
BcaC09g47670 Brassica carinata HOM05D004835 ORTHO05D006046 2.0e-80 303.5 337 51.3
SMO147G0180 Selaginella moellendorffii HOM05D004835 ORTHO05D006046 1.1e-78 297.7 247 57.5
FAN21G1397 Fragaria x ananassa HOM05D004835 ORTHO05D006046 1.8e-78 297.0 246 65.0
TPR.G4570 Trifolium pratense HOM05D004835 ORTHO05D006046 7.5e-72 275.0 246 65.0
CBR_g38977 Chara braunii HOM05D004835 ORTHO05D006046 2.3e-68 263.5 255 51.4
CSS0001434 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 4.7e-66 255.8 280 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis HOM05D004835 ORTHO05D006046 4.1e-62 242.7 355 42.0
BolC1t05935H Brassica oleracea HOM05D004835 ORTHO05D006046 1.2e-53 214.5 171 64.3
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus HOM05D004835 ORTHO05D006046 1.6e-53 214.2 154 67.5
MCO14G521 Micromonas commoda HOM05D004835 ORTHO05D006046 1.7e-52 210.7 250 47.2
Cre12.g514600 Chlamydomonas reinhardtii HOM05D004835 ORTHO05D006046 3.0e-52 209.9 239 43.5
Dinv20014 Davidia involucrata HOM05D004835 ORTHO05D006046 2.4e-41 173.7 117 73.5
MD10G1314400 Malus domestica HOM05D004835 ORTHO05D006046 2.1e-34 150.6 246 39.4
BolC1t05929H Brassica oleracea HOM05D004835 ORTHO05D006046 2.5e-27 127.1 202 40.6
Dinv20013 Davidia involucrata HOM05D004835 ORTHO05D006046 1.4e-22 111.3 72 70.8
CANSAT64G1413 Cannabis sativa HOM05D004835 ORTHO05D006046 4.6e-21 106.3 154 42.2
Ca_29404_v3 Cicer arietinum L. HOM05D004835 ORTHO05D148401 1.9e-14 84.3 197 31.5


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