Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5514 Trifolium pratense HOM05D004361 ORTHO05D004706 1.7e-42 175.6 91 100.0
Medtr1g105555 Medicago truncatula HOM05D004361 ORTHO05D004706 5.3e-28 127.5 82 85.4
TPR.G5469 Trifolium pratense HOM05D004361 ORTHO05D004706 4.5e-27 124.4 82 85.4
Lj5g0000713 Lotus japonicus HOM05D004361 ORTHO05D004706 1.9e-25 119.0 81 79.0
Psat6g210400 Pisum sativum HOM05D004361 ORTHO05D004706 6.0e-24 114.0 95 69.5
Glyma.10G252400 Glycine max HOM05D004361 ORTHO05D004706 1.3e-23 112.8 81 74.1
Glyma.20G141000 Glycine max HOM05D004361 ORTHO05D004706 1.9e-22 109.0 81 71.6
arahy.Tifrunner.gnm1.ann1.SFZ90Y Arachis hypogaea HOM05D004361 ORTHO05D004706 2.2e-21 105.5 82 69.5
arahy.Tifrunner.gnm1.ann1.F31F99 Arachis hypogaea HOM05D004361 ORTHO05D004706 3.7e-21 104.8 82 69.5
VMungo0720G0988 Vigna mungo HOM05D004361 ORTHO05D004706 3.7e-21 104.8 81 66.7
Phvul.007G051800 Phaseolus vulgaris HOM05D004361 ORTHO05D004706 5.3e-20 100.9 81 70.4
Glyma.01G240500 Glycine max HOM05D004361 ORTHO05D004706 4.5e-19 97.8 77 68.8
Glyma.11G003100 Glycine max HOM05D004361 ORTHO05D004706 1.7e-18 95.9 75 69.3
Phvul.002G049100 Phaseolus vulgaris HOM05D004361 ORTHO05D004706 5.5e-17 90.9 72 66.7
Lalb_Chr02g0144581 Lupinus albus HOM05D004361 ORTHO05D004706 5.7e-14 80.9 76 63.2
Psat4g215200 Pisum sativum HOM05D004361 ORTHO05D004706 1.4e-12 76.3 65 58.5
TPR.G22022 Trifolium pratense HOM05D004361 ORTHO05D004706 1.4e-12 76.3 66 60.6
TPR.G8297 Trifolium pratense HOM05D004361 ORTHO05D004706 3.1e-12 75.1 66 59.1
FvH4_3g02690 Fragaria vesca HOM05D004361 ORTHO05D004706 3.4e-11 71.6 87 46.0
VMungo1215G1007 Vigna mungo HOM05D004361 ORTHO05D004706 4.5e-11 71.2 83 53.0
FAN25G3407 Fragaria x ananassa HOM05D004361 ORTHO05D004706 1.7e-10 69.3 87 44.8
Cfa000279 Carpinus fangiana HOM05D004361 ORTHO05D004706 2.2e-10 68.9 77 50.6
Nitab4.5_0001686g0040 Nicotiana tabacum HOM05D004361 ORTHO05D004706 6.5e-10 67.4 73 54.8
QL05p075222 Quercus lobata HOM05D004361 ORTHO05D004706 6.5e-10 67.4 76 53.9
Gohir.D06G213000 Gossypium hirsutum HOM05D004361 ORTHO05D004706 8.5e-10 67.0 78 51.3
MD05G1340800 Malus domestica HOM05D004361 ORTHO05D004706 8.5e-10 67.0 79 46.8
Gohir.A06G208100 Gossypium hirsutum HOM05D004361 ORTHO05D004706 1.4e-09 66.2 77 53.2
Peaxi162Scf00678g00313 Petunia axillaris HOM05D004361 ORTHO05D004706 2.5e-09 65.5 72 51.4
CiPaw.09G086700 Carya illinoinensis HOM05D004361 ORTHO05D004706 3.2e-09 65.1 85 50.6
Medtr5g005560 Medicago truncatula HOM05D004361 ORTHO05D004706 3.2e-09 65.1 83 55.4
GSVIVG01012625001 Vitis vinifera HOM05D004361 ORTHO05D004706 4.2e-09 64.7 76 51.3
CiPaw.10G068100 Carya illinoinensis HOM05D004361 ORTHO05D004706 5.5e-09 64.3 64 56.2
COL.COLO4_31721 Corchorus olitorius HOM05D004361 ORTHO05D004706 5.5e-09 64.3 85 48.2
Duzib192G0487 Durio zibethinus HOM05D004361 ORTHO05D004706 5.5e-09 64.3 92 44.6
Haze_06732 Corylus avellana HOM05D004361 ORTHO05D004706 9.4e-09 63.5 67 53.7
Haze_06736 Corylus avellana HOM05D004361 ORTHO05D004706 9.4e-09 63.5 67 53.7
FAN21G0156 Fragaria x ananassa HOM05D004361 ORTHO05D004706 9.4e-09 63.5 87 42.5
Lj1g0002529 Lotus japonicus HOM05D004361 ORTHO05D004706 2.1e-08 62.4 61 63.9
Duzib235G0682 Durio zibethinus HOM05D004361 ORTHO05D004706 2.7e-08 62.0 85 49.4
Manes.16G012800 Manihot esculenta HOM05D004361 ORTHO05D004706 2.7e-08 62.0 82 43.9
Nitab4.5_0002847g0010 Nicotiana tabacum HOM05D004361 ORTHO05D004706 4.7e-08 61.2 74 52.7
Solyc02g080110.3 Solanum lycopersicum HOM05D004361 ORTHO05D004706 4.7e-08 61.2 79 48.1
Cpa.g.sc198.2 Carica papaya HOM05D004361 ORTHO05D004706 6.1e-08 60.8 74 50.0
Sabra04G0012700 Salix brachista HOM05D004361 ORTHO05D004706 6.1e-08 60.8 82 43.9
Potri.004G023000 Populus trichocarpa HOM05D004361 ORTHO05D004706 1.0e-07 60.1 81 46.9
Sopen02g024830 Solanum pennellii HOM05D004361 ORTHO05D004706 1.0e-07 60.1 79 46.8
Prupe.4G026600 Prunus persica HOM05D004361 ORTHO05D004706 1.4e-07 59.7 77 42.9
Atru.chr10.2143 Acer truncatum HOM05D004361 ORTHO05D004706 2.3e-07 58.9 58 56.9
Gorai.010G253100 Gossypium raimondii HOM05D004361 ORTHO05D004706 2.3e-07 58.9 88 45.5
CAN.G569.44 Capsicum annuum HOM05D004361 ORTHO05D004706 3.0e-07 58.5 74 50.0
Manes.17G034800 Manihot esculenta HOM05D004361 ORTHO05D004706 3.0e-07 58.5 83 41.0
CANSAT56G2280 Cannabis sativa HOM05D004361 ORTHO05D004706 3.9e-07 58.2 81 43.2
PGSC0003DMG400002067 Solanum tuberosum HOM05D004361 ORTHO05D004706 5.1e-07 57.8 72 50.0
TWI38G0935 Tripterygium wilfordii HOM05D004361 ORTHO05D004706 5.1e-07 57.8 85 44.7
RcHm_v2.0_Chr5g0004031 Rosa chinensis HOM05D004361 ORTHO05D004706 6.7e-07 57.4 74 47.3
Thecc.06G213600 Theobroma cacao HOM05D004361 ORTHO05D004706 6.7e-07 57.4 86 45.3
Gohir.A06G145600 Gossypium hirsutum HOM05D004361 ORTHO05D004706 8.8e-07 57.0 83 44.6
Lalb_Chr21g0307851 Lupinus albus HOM05D004361 ORTHO05D004706 1.1e-06 56.6 78 52.6
Ciclev10016643m.g Citrus clementina HOM05D004361 ORTHO05D004706 1.5e-06 56.2 63 55.6
Potri.011G026900 Populus trichocarpa HOM05D004361 ORTHO05D004706 1.5e-06 56.2 85 43.5
Rhsim02G0112300 Rhododendron simsii HOM05D004361 ORTHO05D004706 1.5e-06 56.2 75 42.7
MSTRG.15964 Avicennia marina HOM05D004361 ORTHO05D004706 2.0e-06 55.8 76 48.7
Dinv17836 Davidia involucrata HOM05D004361 ORTHO05D004706 2.0e-06 55.8 67 47.8
Gorai.010G176700 Gossypium raimondii HOM05D004361 ORTHO05D004706 2.0e-06 55.8 69 47.8
MD10G1314300 Malus domestica HOM05D004361 ORTHO05D004706 2.0e-06 55.8 81 44.4
TWI38G1626 Tripterygium wilfordii HOM05D004361 ORTHO05D004706 2.6e-06 55.5 82 45.1
Gohir.D06G151500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 3.3e-06 55.1 69 47.8
Peaxi162Scf00082g00177 Petunia axillaris HOM05D004361 ORTHO05D004706 5.7e-06 54.3 71 45.1


User provided reference genes

Program Settings