Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G54 Trifolium pratense HOM05D003216 ORTHO05D002268 1.2e-68 263.1 135 100.0
TPR.G28618 Trifolium pratense HOM05D000593 ORTHO05D000562 1.1e-58 229.9 120 90.0
TPR.G8671 Trifolium pratense HOM05D000593 ORTHO05D000562 4.4e-55 218.0 120 85.0
TPR.G20851 Trifolium pratense HOM05D000593 ORTHO05D000562 6.0e-52 207.6 107 89.7
TPR.G37709 Trifolium pratense HOM05D003216 ORTHO05D000562 3.5e-36 155.2 84 85.7
TPR.G3927 Trifolium pratense HOM05D003216 ORTHO05D002268 2.4e-32 142.5 76 88.2
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 1.8e-24 116.3 119 51.3
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 2.6e-23 112.5 119 50.4
TPR.G29741 Trifolium pratense HOM05D000593 ORTHO05D002268 7.6e-23 110.9 121 45.5
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 2.2e-22 109.4 119 48.7
Medtr3g467680 Medicago truncatula HOM05D003216 ORTHO05D002268 7.1e-21 104.4 119 41.2
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 2.1e-20 102.8 119 47.9
Medtr8g020433 Medicago truncatula HOM05D000593 ORTHO05D004526 3.5e-20 102.1 119 47.1
Medtr2g030885 Medicago truncatula HOM05D003216 ORTHO05D002268 1.0e-19 100.5 119 45.4
Medtr3g104430 Medicago truncatula HOM05D003216 ORTHO05D000562 1.3e-19 100.1 115 38.3
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-18 96.3 143 36.4
TPR.G21191 Trifolium pratense HOM05D003216 ORTHO05D002268 1.9e-18 96.3 64 62.5
Medtr7g056013 Medicago truncatula HOM05D003216 ORTHO05D002268 4.3e-18 95.1 120 39.2
Medtr3g032550 Medicago truncatula HOM05D003216 ORTHO05D002268 5.6e-18 94.7 98 44.9
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 7.4e-18 94.4 108 44.4
Medtr1g099140 Medicago truncatula HOM05D000593 ORTHO05D000562 1.6e-17 93.2 117 36.8
Medtr1g103800 Medicago truncatula HOM05D003216 ORTHO05D002268 1.4e-16 90.1 98 50.0
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 5.3e-16 88.2 119 37.8
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 6.9e-16 87.8 119 44.5
CSS0015084 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 7.6e-15 84.3 119 34.5
Medtr8g468040 Medicago truncatula HOM05D003216 ORTHO05D002268 7.6e-15 84.3 120 35.0
Medtr4g132765 Medicago truncatula HOM05D003216 ORTHO05D002268 2.2e-14 82.8 119 34.5
Hma1.2p1_0353F.1_g133160 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.9e-14 82.4 119 35.3
Ca_26997_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 6.4e-14 81.3 118 34.7
TPR.G27988 Trifolium pratense HOM05D000593 ORTHO05D000562 6.4e-14 81.3 117 38.5
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 1.9e-13 79.7 119 35.3
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 7.1e-13 77.8 119 34.5
Ca_02694_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 7.1e-13 77.8 118 34.7
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 7.1e-13 77.8 115 35.7
PSO675G4112 Papaver somniferum HOM05D000593 ORTHO05D000562 9.3e-13 77.4 119 32.8
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.2e-12 77.0 119 33.6
Ca_18398_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.7e-12 75.9 119 34.5
Medtr8g028025 Medicago truncatula HOM05D003216 ORTHO05D002268 2.7e-12 75.9 107 33.6
PSO541G6383 Papaver somniferum HOM05D000593 ORTHO05D000562 2.7e-12 75.9 119 31.9
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 6.0e-12 74.7 104 33.7
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 6.0e-12 74.7 117 32.5
PSO063G1358 Papaver somniferum HOM05D000593 ORTHO05D000562 6.0e-12 74.7 106 34.9
Hma1.2p1_0319F.1_g123940 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 7.9e-12 74.3 119 31.9
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 7.9e-12 74.3 62 50.0
Medtr7g068370 Medicago truncatula HOM05D003216 ORTHO05D002268 7.9e-12 74.3 120 34.2
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 1.8e-11 73.2 109 33.0
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.0e-11 72.4 104 32.7
Medtr1g094105 Medicago truncatula HOM05D000593 ORTHO05D000562 3.0e-11 72.4 118 38.1
CSS0048160 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 8.7e-11 70.9 119 29.4
PSO585G0009 Papaver somniferum HOM05D000593 ORTHO05D000562 1.5e-10 70.1 120 29.2
CSS0003309 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.9e-10 69.7 104 32.7
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 3.3e-10 68.9 119 34.5
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 3.3e-10 68.9 62 46.8
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 5.6e-10 68.2 119 32.8
Ca_20438_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.3e-09 67.0 100 36.0
TWI56G1041 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.3e-09 67.0 119 32.8
CANSAT01G1396 Cannabis sativa HOM05D000593 ORTHO05D000562 2.1e-09 66.2 119 29.4
Hma1.2p1_1175F.1_g264110 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.1e-09 66.2 109 33.0
TWI79G0388 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.1e-09 66.2 119 32.8
CSS0025640 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.8e-09 65.9 104 29.8
PSO832G0356 Papaver somniferum HOM05D000593 ORTHO05D000562 2.8e-09 65.9 120 30.8
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 3.7e-09 65.5 119 31.9
PSO541G2752 Papaver somniferum HOM05D000593 ORTHO05D000562 3.7e-09 65.5 119 26.9
Aqoxy7G02031 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 4.8e-09 65.1 111 28.8
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.2e-09 64.7 119 32.8
TWI53G0239 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.2e-09 64.7 119 31.9
TWI56G0917 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.2e-09 64.7 119 33.6
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 8.2e-09 64.3 90 33.3
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.1e-08 63.9 94 30.9
PSO832G1919 Papaver somniferum HOM05D000593 ORTHO05D000562 1.8e-08 63.2 105 30.5
Ca_05375_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 2.4e-08 62.8 97 34.0
PSO063G3477 Papaver somniferum HOM05D000593 ORTHO05D000562 2.4e-08 62.8 105 30.5
PSO063G7449 Papaver somniferum HOM05D000593 ORTHO05D000562 2.4e-08 62.8 105 29.5
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 2.4e-08 62.8 119 31.1
Aqoxy4G01994 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 4.0e-08 62.0 112 31.2
PSO675G4622 Papaver somniferum HOM05D000593 ORTHO05D000562 4.0e-08 62.0 119 26.1
PSO832G2496 Papaver somniferum HOM05D000593 ORTHO05D000562 4.0e-08 62.0 105 28.6
TPR.G22274 Trifolium pratense HOM05D003216 ORTHO05D004526 4.0e-08 62.0 29 89.7
TWI36G0859 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.0e-08 62.0 114 32.5
TWI75G0252 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.0e-08 62.0 119 30.3
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 5.3e-08 61.6 114 30.7
TPR.G36292 Trifolium pratense HOM05D000593 ORTHO05D002268 5.3e-08 61.6 68 39.7
TWI36G1372 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.9e-08 61.2 114 31.6
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 9.0e-08 60.8 62 43.5
Ca_15677_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 9.0e-08 60.8 101 34.7
TWI09G0669 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.0e-08 60.8 118 29.7
TWI12G0007 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 9.0e-08 60.8 119 30.3
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-07 59.7 41 61.0
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 2.6e-07 59.3 119 30.3
Ca_25222_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 3.4e-07 58.9 69 40.6
PSO063G7547 Papaver somniferum HOM05D000593 ORTHO05D000562 3.4e-07 58.9 119 26.9
TWI12G1095 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.4e-07 58.9 119 29.4
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 4.5e-07 58.5 119 29.4
TWI32G0746 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.5e-07 58.5 119 28.6
Ca_23377_v3 Cicer arietinum L. HOM05D000593 ORTHO05D002268 7.6e-07 57.8 89 37.1
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 7.6e-07 57.8 38 60.5
TWI38G0853 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.6e-07 57.8 118 29.7
PSO782G4983 Papaver somniferum HOM05D000593 ORTHO05D000562 1.0e-06 57.4 119 26.9
TWI79G0011 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.0e-06 57.4 109 31.2
Aqoxy2G01165 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.3e-06 57.0 119 29.4
TWI12G0648 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.2e-06 56.2 119 26.9
Medtr5g413325 Medicago truncatula HOM05D003216 ORTHO05D002268 2.9e-06 55.8 75 42.7
Gorai.009G169100 Gossypium raimondii HOM05D000593 ORTHO05D000562 3.8e-06 55.5 119 27.7
TPR.G14990 Trifolium pratense HOM05D003216 ORTHO05D002268 3.8e-06 55.5 62 40.3
TPR.G18522 Trifolium pratense HOM05D000593 ORTHO05D002268 3.8e-06 55.5 62 40.3
TWI59G0546 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.8e-06 55.5 109 30.3
TPR.G33340 Trifolium pratense HOM05D000072 ORTHO05D000026 6.5e-06 54.7 54 44.4


User provided reference genes

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