Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 1.0e-171 606.7 316 100.0
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 2.2e-137 492.7 309 77.7
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 1.5e-133 479.9 317 76.3
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 2.5e-125 452.6 313 76.7
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 6.3e-121 438.0 321 72.6
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 4.5e-119 431.8 319 68.3
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 2.9e-118 429.1 321 71.0
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 3.6e-116 422.2 313 66.5
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 2.9e-113 412.5 307 70.0
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 7.0e-112 407.9 322 67.7
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 1.7e-110 403.3 322 67.7
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 3.4e-106 389.0 327 64.8
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 3.0e-102 375.9 314 61.8
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 5.6e-101 371.7 313 61.3
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 1.8e-99 366.7 313 62.3
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 4.4e-98 362.1 317 61.8
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 2.2e-97 359.8 317 63.7
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 2.9e-97 359.4 320 63.4
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 7.8e-95 351.3 325 56.9
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 1.5e-93 347.1 323 60.4
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 2.5e-93 346.3 315 57.8
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 7.3e-93 344.7 318 56.0
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 1.6e-92 343.6 319 63.0
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 1.4e-91 340.5 318 55.3
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 1.4e-91 340.5 318 55.7
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 1.2e-90 337.4 318 55.0
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 2.6e-90 336.3 316 54.4
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 2.6e-90 336.3 315 63.2
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 2.6e-90 336.3 317 53.0
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 4.4e-90 335.5 313 56.2
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 4.4e-90 335.5 317 53.0
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 5.8e-90 335.1 315 55.6
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 7.6e-90 334.7 311 53.7
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 1.7e-89 333.6 313 55.9
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 4.9e-89 332.0 314 54.5
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 4.9e-89 332.0 317 53.6
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 4.9e-89 332.0 329 53.5
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 6.4e-89 331.6 328 53.7
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 1.4e-88 330.5 319 53.6
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 2.4e-88 329.7 319 53.3
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 3.2e-88 329.3 317 53.6
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 3.2e-88 329.3 314 53.2
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 7.1e-88 328.2 316 53.2
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 1.6e-87 327.0 317 52.7
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 3.5e-87 325.9 317 52.1
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 1.0e-86 324.3 326 56.4
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 1.3e-86 323.9 317 52.1
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 1.7e-86 323.6 313 55.3
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 3.0e-86 322.8 240 68.8
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.1e-85 320.9 319 51.4
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.1e-85 320.9 319 51.7
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 1.9e-85 320.1 319 52.4
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 2.5e-85 319.7 315 53.3
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 4.3e-85 318.9 291 55.3
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 7.3e-85 318.2 319 51.4
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 4.8e-84 315.5 315 50.8
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 5.3e-83 312.0 317 49.8
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 9.0e-83 311.2 310 51.0
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 9.0e-83 311.2 316 50.9
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 1.5e-82 310.5 306 51.0
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 2.0e-82 310.1 316 51.6
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 9.9e-82 307.8 306 50.7
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 1.7e-81 307.0 312 51.0
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 2.2e-81 306.6 314 52.5
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 2.9e-81 306.2 306 51.0
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 4.9e-81 305.4 321 47.7
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 4.9e-81 305.4 306 50.7
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 6.4e-81 305.1 306 50.3
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 8.4e-81 304.7 334 49.4
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 1.1e-80 304.3 307 50.5
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 1.4e-80 303.9 314 51.3
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 1.4e-80 303.9 306 49.3
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 2.4e-80 303.1 306 52.0
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 3.2e-80 302.8 318 52.2
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 3.2e-80 302.8 311 55.9
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 3.2e-80 302.8 319 48.3
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 4.2e-80 302.4 310 49.7
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 7.1e-80 301.6 318 52.5
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 7.1e-80 301.6 318 49.1
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 9.3e-80 301.2 318 48.7
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 9.3e-80 301.2 316 50.0
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 9.3e-80 301.2 314 50.6
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 1.6e-79 300.4 308 49.7
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 1.6e-79 300.4 306 50.3
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 2.1e-79 300.1 323 48.0
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 2.7e-79 299.7 306 49.3
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 6.0e-79 298.5 320 50.3
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 7.8e-79 298.1 309 49.8
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 7.8e-79 298.1 326 49.4
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 7.8e-79 298.1 317 50.8
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 7.8e-79 298.1 320 50.3
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 7.8e-79 298.1 366 46.2
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 1.3e-78 297.4 326 49.1
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 3.9e-78 295.8 321 49.5
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 5.1e-78 295.4 313 51.4
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 8.7e-78 294.7 319 46.7
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 3.3e-77 292.7 317 48.9
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 9.6e-77 291.2 306 48.0
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 3.6e-76 289.3 306 48.4
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 4.8e-76 288.9 283 53.4
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 4.8e-76 288.9 335 51.6
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 6.2e-76 288.5 312 53.5
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 2.4e-75 286.6 236 59.3
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 3.1e-75 286.2 322 46.9
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 3.1e-75 286.2 205 69.8
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 9.0e-75 284.6 271 55.4
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 1.2e-74 284.3 320 51.2
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 1.5e-74 283.9 274 51.8
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 2.0e-74 283.5 323 51.1
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 4.5e-74 282.3 315 52.1
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 7.6e-74 281.6 287 50.5
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 5.4e-72 275.4 233 57.1
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 5.4e-72 275.4 233 57.1
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 1.6e-71 273.9 233 56.7
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 1.6e-71 273.9 233 56.7
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 7.9e-71 271.6 269 52.8
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 3.0e-70 269.6 356 44.1
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 1.6e-68 263.8 316 45.9
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 6.2e-68 261.9 319 45.8
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 2.2e-65 253.4 322 47.8
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 6.2e-60 235.3 321 41.1
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 6.9e-59 231.9 327 41.3
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 1.3e-54 217.6 182 57.7
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 8.2e-52 208.4 314 40.1
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 6.9e-51 205.3 208 51.9
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 6.9e-51 205.3 297 41.8
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 6.5e-49 198.7 319 40.8
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 2.1e-47 193.7 222 49.5
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 5.1e-46 189.1 317 36.6
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 6.3e-44 182.2 183 50.8
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 1.1e-43 181.4 275 41.1
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 2.0e-42 177.2 216 56.0
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 7.7e-42 175.3 317 37.9
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.4e-40 171.0 297 33.0
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 9.4e-40 168.3 317 31.9
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 1.1e-37 161.4 135 55.6
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 1.1e-37 161.4 266 41.4
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 9.7e-37 158.3 297 37.0
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 5.3e-35 152.5 317 30.3
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 8.5e-33 145.2 322 35.4
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 4.5e-26 122.9 115 55.7
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 2.9e-25 120.2 134 44.8
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 2.9e-17 93.6 236 32.6
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-16 91.3 227 29.5
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.5e-16 90.5 81 51.9
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 3.2e-16 90.1 161 35.4
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 6.1e-15 85.9 162 42.6
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 9.8e-13 78.6 126 41.3
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 2.7e-10 70.5 251 27.1
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 5.9e-10 69.3 105 49.5
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.7e-09 67.8 99 38.4
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 8.6e-09 65.5 204 27.9
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.9e-08 64.3 174 32.2
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 5.6e-08 62.8 111 37.8
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 7.2e-08 62.4 225 26.7
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 6.8e-06 55.8 109 35.8


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