Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G533 Trifolium pratense HOM05D008382 ORTHO05D011503 4.6e-33 144.1 76 100.0
TPR.G22660 Trifolium pratense HOM05D000149 ORTHO05D000076 4.3e-23 110.9 76 78.9
TPR.G4156 Trifolium pratense HOM05D000007 ORTHO05D000521 2.1e-22 108.6 76 77.6
EL10Ac6g14458 Beta vulgaris HOM05D008382 ORTHO05D011503 6.2e-22 107.1 76 73.7
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 1.4e-21 105.9 76 75.0
EL10Ac3g06996 Beta vulgaris HOM05D008382 ORTHO05D000563 5.8e-20 100.5 74 73.0
EL10Ac2g03748 Beta vulgaris HOM05D000004 ORTHO05D000002 9.9e-20 99.8 74 73.0
EL10Ac1g00890 Beta vulgaris HOM05D008382 ORTHO05D000002 1.3e-19 99.4 76 71.1
EL10As2g23215 Beta vulgaris HOM05D008382 ORTHO05D000002 3.7e-19 97.8 74 71.6
EL10Ac2g03002 Beta vulgaris HOM05D000004 ORTHO05D000002 6.4e-19 97.1 74 70.3
Psat7g116360 Pisum sativum HOM05D008382 ORTHO05D011503 5.1e-16 87.4 75 66.7
AUR62028416 Chenopodium quinoa HOM05D008382 ORTHO05D000563 1.5e-15 85.9 76 65.8
TPR.G23161 Trifolium pratense HOM05D008382 ORTHO05D000002 4.0e-13 77.8 56 75.0
EL10Ac9g20928 Beta vulgaris HOM05D000019 ORTHO05D026972 1.2e-12 76.3 53 75.5
Medtr2g076860 Medicago truncatula HOM05D008382 ORTHO05D011503 3.4e-12 74.7 46 82.6
BraA04t16042Z Brassica rapa HOM05D000104 ORTHO05D005891 9.9e-12 73.2 46 84.8
FvH4_2g28221 Fragaria vesca HOM05D008382 ORTHO05D000563 9.9e-12 73.2 72 55.6
FvH4_3g34591 Fragaria vesca HOM05D008382 ORTHO05D000563 2.9e-11 71.6 70 57.1
FvH4_4g24071 Fragaria vesca HOM05D008382 ORTHO05D000563 2.9e-11 71.6 70 55.7
FvH4_2g17922 Fragaria vesca HOM05D000004 ORTHO05D000002 4.9e-11 70.9 51 66.7
FvH4_3g27861 Fragaria vesca HOM05D000004 ORTHO05D000002 8.4e-11 70.1 72 54.2
RcHm_v2.0_Chr4g0427231 Rosa chinensis HOM05D000004 ORTHO05D000002 1.4e-10 69.3 59 62.7
FvH4_5g21912 Fragaria vesca HOM05D008382 ORTHO05D000563 3.2e-10 68.2 76 51.3
FvH4_5g39371 Fragaria vesca HOM05D000004 ORTHO05D000002 3.2e-10 68.2 72 54.2
BcaC07g39411 Brassica carinata HOM05D008382 ORTHO05D011503 7.1e-10 67.0 59 64.4
FvH4_6g32372 Fragaria vesca HOM05D008382 ORTHO05D000563 9.2e-10 66.6 70 54.3
FvH4_3g10372 Fragaria vesca HOM05D001538 ORTHO05D000007 3.5e-09 64.7 72 52.8
FvH4_4g14286 Fragaria vesca HOM05D008382 ORTHO05D000563 1.0e-08 63.2 44 68.2
RcHm_v2.0_Chr3g0461881 Rosa chinensis HOM05D000004 ORTHO05D000002 3.0e-08 61.6 74 54.1
Dinv04070 Davidia involucrata HOM05D019202 ORTHO05D009660 1.1e-07 59.7 43 67.4
Atru.chr1.2265 Acer truncatum HOM05D000004 ORTHO05D000002 2.8e-06 55.1 61 54.1
Hma1.2p1_0253F.1_g103130 Hydrangea macrophylla HOM05D000004 ORTHO05D000563 3.6e-06 54.7 71 40.8
TWI59G0882 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 6.2e-06 53.9 67 49.3


User provided reference genes

Program Settings