Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 3.1e-229 798.1 399 100.0
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 6.6e-192 674.1 396 86.4
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 2.1e-190 669.1 400 85.0
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.7e-179 632.9 394 79.7
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 5.7e-175 617.8 396 78.3
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 7.6e-172 607.4 401 77.3
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 6.1e-169 597.8 383 78.1
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 2.3e-168 595.9 389 76.3
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 8.7e-168 594.0 389 76.3
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 3.8e-163 578.6 388 75.5
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 5.1e-160 568.2 401 72.8
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.2e-140 503.8 367 67.3
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 5.9e-140 501.5 396 63.6
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.3e-139 500.4 387 66.4
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.1e-138 497.3 375 65.3
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 4.7e-137 491.9 385 64.9
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 8.0e-137 491.1 383 64.0
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.3e-136 489.6 396 63.1
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 8.8e-136 487.6 393 63.9
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 3.4e-135 485.7 377 63.9
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 5.7e-135 485.0 395 62.0
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 7.5e-135 484.6 396 62.1
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 3.7e-134 482.3 397 62.5
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 1.8e-133 479.9 386 64.5
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 4.1e-133 478.8 392 62.0
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 4.1e-133 478.8 391 62.4
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.1e-133 478.8 385 62.1
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 2.0e-132 476.5 368 64.7
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.7e-132 474.6 391 61.9
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.3e-131 473.8 389 61.4
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 2.9e-131 472.6 385 60.8
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.9e-131 472.6 397 61.7
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 3.8e-131 472.2 364 65.4
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.1e-130 470.7 380 62.9
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 6.1e-129 464.9 364 63.7
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.8e-128 463.4 376 62.8
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 2.8e-126 456.1 369 61.2
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 1.4e-125 453.8 408 58.1
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 4.1e-125 452.2 384 60.7
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.0e-123 447.6 373 60.3
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 1.3e-123 447.2 275 81.5
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 2.3e-123 446.4 385 59.0
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 1.1e-122 444.1 367 60.8
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 5.6e-122 441.8 398 58.8
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 1.2e-121 440.7 396 57.8
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 4.7e-121 438.7 372 59.9
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 4.7e-121 438.7 356 60.7
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 6.1e-121 438.3 370 61.1
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 6.1e-121 438.3 373 60.3
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 8.0e-121 438.0 285 73.3
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.8e-120 436.8 392 58.4
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 3.0e-120 436.0 440 53.9
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 6.8e-120 434.9 362 61.3
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 8.9e-120 434.5 369 61.2
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 3.4e-119 432.6 393 58.0
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 1.7e-118 430.3 374 58.8
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 2.2e-118 429.9 398 56.0
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 4.9e-118 428.7 389 56.3
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 1.8e-117 426.8 374 58.0
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 3.2e-117 426.0 378 58.7
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.2e-116 424.1 374 57.8
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 1.6e-116 423.7 362 60.5
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.7e-116 422.9 336 63.1
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 7.8e-116 421.4 362 60.5
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 1.9e-114 416.8 348 60.3
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 2.5e-114 416.4 348 60.3
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 2.5e-114 416.4 392 54.8
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 5.6e-114 415.2 369 56.6
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 7.3e-114 414.8 348 60.1
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.2e-113 414.1 371 58.2
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 1.6e-113 413.7 394 53.0
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 3.6e-113 412.5 357 58.0
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 4.7e-113 412.1 362 58.3
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.4e-112 410.6 380 57.6
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 2.3e-112 409.8 283 69.3
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 4.4e-111 405.6 332 62.0
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 4.4e-111 405.6 363 58.4
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 5.8e-111 405.2 373 56.3
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 7.5e-111 404.8 345 58.6
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 9.8e-111 404.4 376 55.9
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 2.2e-110 403.3 357 58.0
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 4.1e-109 399.1 371 55.3
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 7.0e-109 398.3 375 55.2
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 1.3e-107 394.0 391 54.5
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 6.6e-107 391.7 386 53.4
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 2.5e-106 389.8 271 68.3
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 8.3e-102 374.8 394 53.6
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 4.1e-101 372.5 285 63.5
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.6e-99 365.2 273 65.9
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 6.6e-99 365.2 362 53.6
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 8.6e-99 364.8 284 62.7
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.5e-98 364.0 362 53.6
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 9.5e-98 361.3 403 46.7
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 2.4e-93 346.7 273 63.4
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 1.6e-92 344.0 242 69.4
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 8.6e-91 338.2 244 66.4
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.6e-89 334.0 379 47.2
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.0e-87 327.0 305 56.4
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.1e-85 321.2 313 52.1
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.4e-85 320.9 213 71.8
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 1.3e-83 314.3 319 49.5
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.9e-80 302.0 179 77.1
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 5.8e-79 298.9 306 50.7
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 1.9e-77 293.9 331 48.6
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 5.4e-77 292.4 295 53.6
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 3.0e-75 286.6 179 72.6
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 5.3e-64 249.2 196 67.9
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 7.2e-53 212.2 231 47.2
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.7e-46 191.0 146 60.3
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 5.1e-43 179.5 330 37.3
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 9.1e-40 168.7 140 62.1
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 3.8e-38 163.3 265 37.7
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.9e-37 161.0 204 43.1
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 3.0e-35 153.7 157 51.0
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.3e-25 121.7 99 61.6
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.2e-15 88.6 100 51.0
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 4.0e-11 73.6 53 66.0
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.8e-09 67.4 48 62.5
Medtr4g025750 Medicago truncatula HOM05D006491 ORTHO05D008317 5.0e-06 56.6 56 55.4


User provided reference genes

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