Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5286 Trifolium pratense HOM05D000007 ORTHO05D000521 2.7e-51 204.9 95 100.0
TPR.G4156 Trifolium pratense HOM05D000007 ORTHO05D000521 4.5e-38 161.0 90 82.2
TPR.G18184 Trifolium pratense HOM05D000007 ORTHO05D000521 5.2e-18 94.4 68 66.2
Medtr5g010660 Medicago truncatula HOM05D000007 ORTHO05D000521 6.8e-18 94.0 78 53.8
Medtr4g027370 Medicago truncatula HOM05D000007 ORTHO05D000521 6.3e-16 87.4 64 60.9
Medtr5g021860 Medicago truncatula HOM05D000007 ORTHO05D000521 1.1e-15 86.7 64 60.9
Medtr5g021880 Medicago truncatula HOM05D000007 ORTHO05D000521 4.1e-15 84.7 66 59.1
Medtr0627s0010 Medicago truncatula HOM05D000007 ORTHO05D000521 1.2e-14 83.2 73 57.5
Medtr5g022045 Medicago truncatula HOM05D000007 ORTHO05D000521 1.2e-14 83.2 68 58.8
TPR.G18189 Trifolium pratense HOM05D000007 ORTHO05D000521 4.5e-14 81.3 69 55.1
TPR.G30748 Trifolium pratense HOM05D000007 ORTHO05D000521 4.5e-14 81.3 66 62.1
Medtr5g022040 Medicago truncatula HOM05D000007 ORTHO05D000521 5.9e-14 80.9 68 57.4
Medtr5g010560 Medicago truncatula HOM05D000007 ORTHO05D000521 1.0e-13 80.1 68 60.3
Medtr5g010610 Medicago truncatula HOM05D000007 ORTHO05D000521 1.0e-13 80.1 68 60.3
Medtr5g022900 Medicago truncatula HOM05D000007 ORTHO05D000521 1.7e-13 79.3 66 60.6
Medtr7g090810 Medicago truncatula HOM05D000007 ORTHO05D000521 2.3e-13 79.0 72 55.6
TPR.G14415 Trifolium pratense HOM05D000007 ORTHO05D000521 5.0e-13 77.8 69 53.6
TPR.G5355 Trifolium pratense HOM05D041403 ORTHO05D000521 5.0e-13 77.8 76 55.3
Medtr5g010550 Medicago truncatula HOM05D000007 ORTHO05D000521 6.5e-13 77.4 71 57.7
Psat0s3499g0040 Pisum sativum HOM05D000007 ORTHO05D000521 8.6e-13 77.0 70 52.9
TPR.G29403 Trifolium pratense HOM05D000007 ORTHO05D000521 8.6e-13 77.0 69 53.6
TPR.G33734 Trifolium pratense HOM05D000007 ORTHO05D000521 8.6e-13 77.0 71 53.5
Medtr5g022090 Medicago truncatula HOM05D000007 ORTHO05D000521 1.1e-12 76.6 76 52.6
TPR.G37785 Trifolium pratense HOM05D000007 ORTHO05D000521 1.1e-12 76.6 75 52.0
Medtr6g046320 Medicago truncatula HOM05D000007 ORTHO05D000521 1.5e-12 76.3 73 52.1
Ca_24912_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000521 7.2e-12 73.9 65 60.0
Ca_24932_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000521 7.2e-12 73.9 65 60.0
Psat0s3499g0120 Pisum sativum HOM05D000007 ORTHO05D000521 2.1e-11 72.4 88 45.5
TPR.G18192 Trifolium pratense HOM05D000007 ORTHO05D000521 3.6e-11 71.6 48 58.3
TPR.G13135 Trifolium pratense HOM05D000007 ORTHO05D000521 6.1e-11 70.9 64 57.8
Lalb_Chr17g0348371 Lupinus albus HOM05D000007 ORTHO05D000521 8.0e-11 70.5 58 53.4
TPR.G13072 Trifolium pratense HOM05D000007 ORTHO05D000521 3.0e-10 68.6 64 54.7
Psat2g140960 Pisum sativum HOM05D000007 ORTHO05D000521 8.8e-10 67.0 45 57.8
TPR.G34402 Trifolium pratense HOM05D000007 ORTHO05D000521 8.8e-10 67.0 83 36.1
Medtr5g022750 Medicago truncatula HOM05D000007 ORTHO05D000521 1.5e-09 66.2 73 45.2
Haze_08061 Corylus avellana HOM05D000007 ORTHO05D000521 2.0e-09 65.9 56 51.8
Dinv34353 Davidia involucrata HOM05D000007 ORTHO05D000521 1.3e-08 63.2 44 63.6
Lj8A117T66 Lonicera japonica HOM05D000007 ORTHO05D000521 1.3e-08 63.2 70 44.3
Medtr7g117100 Medicago truncatula HOM05D000007 ORTHO05D000521 3.7e-08 61.6 54 53.7
Atru.chr6.3333 Acer truncatum HOM05D000007 ORTHO05D000521 4.9e-08 61.2 75 36.0
Medtr5g027330 Medicago truncatula HOM05D000007 ORTHO05D000521 8.3e-08 60.5 64 50.0
Medtr5g027370 Medicago truncatula HOM05D000007 ORTHO05D000521 8.3e-08 60.5 64 50.0
Rhsim04G0044400 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.8e-07 59.3 43 51.2
Haze_08062 Corylus avellana HOM05D000007 ORTHO05D000521 7.0e-07 57.4 43 58.1
Atru.chr6.3331 Acer truncatum HOM05D000007 ORTHO05D000521 9.2e-07 57.0 76 34.2
Dinv34341 Davidia involucrata HOM05D000007 ORTHO05D000521 9.2e-07 57.0 41 61.0
CSS0006709 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 1.6e-06 56.2 38 63.2
CSS0009515 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 2.7e-06 55.5 38 63.2
CSS0040081 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 5.9e-06 54.3 38 60.5
Rhsim07G0064700 Rhododendron simsii HOM05D000007 ORTHO05D000521 5.9e-06 54.3 44 56.8


User provided reference genes

Program Settings