Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5274 Trifolium pratense HOM05D001549 ORTHO05D003098 4.6e-52 207.6 105 100.0
Medtr5g048280 Medicago truncatula HOM05D001549 ORTHO05D003098 8.8e-19 97.1 54 85.2
Dinv34018 Davidia involucrata HOM05D001549 ORTHO05D003098 2.4e-16 89.0 54 75.9
CSS0036093 Camellia sinensis var. sinensis HOM05D001549 ORTHO05D003098 1.2e-15 86.7 54 75.9
Atru.chr11.1555 Acer truncatum HOM05D001549 ORTHO05D003098 1.6e-15 86.3 58 72.4
Phvul.003G037801 Phaseolus vulgaris HOM05D001549 ORTHO05D003098 1.6e-15 86.3 51 80.4
Glyma.02G123100 Glycine max HOM05D001549 ORTHO05D003098 2.0e-15 85.9 57 75.4
Oeu024155.1 Olea europaea HOM05D001549 ORTHO05D003098 2.0e-15 85.9 68 58.8
RcHm_v2.0_Chr4g0437311 Rosa chinensis HOM05D001549 ORTHO05D003098 5.9e-15 84.3 67 64.2
Sed0003790 Sechium edule HOM05D001549 ORTHO05D003098 1.3e-14 83.2 58 67.2
FAN12G2224 Fragaria x ananassa HOM05D001549 ORTHO05D003098 2.2e-14 82.4 59 66.1
FAN17G2469 Fragaria x ananassa HOM05D001549 ORTHO05D003098 3.8e-14 81.6 59 66.1
MD13G1056200 Malus domestica HOM05D001549 ORTHO05D003098 3.8e-14 81.6 57 68.4
FAN07G2649 Fragaria x ananassa HOM05D001549 ORTHO05D003098 5.0e-14 81.3 59 66.1
CiPaw.05G121200 Carya illinoinensis HOM05D001549 ORTHO05D003098 8.5e-14 80.5 49 77.6
Duzib248G1337 Durio zibethinus HOM05D001549 ORTHO05D003098 8.5e-14 80.5 62 59.7
FAN22G1819 Fragaria x ananassa HOM05D001549 ORTHO05D003098 8.5e-14 80.5 54 70.4
Manes.14G090600 Manihot esculenta HOM05D001549 ORTHO05D003098 1.9e-13 79.3 57 68.4
TPR.G38552 Trifolium pratense HOM05D001549 ORTHO05D003098 7.2e-13 77.4 40 90.0
Potri.010G137801 Populus trichocarpa HOM05D001549 ORTHO05D003098 9.5e-13 77.0 57 70.2
Thecc.02G322400 Theobroma cacao HOM05D001549 ORTHO05D003098 9.5e-13 77.0 57 66.7
TWI75G1409 Tripterygium wilfordii HOM05D001549 ORTHO05D003098 3.6e-12 75.1 57 64.9
HanXRQChr17g0568701 Helianthus annuus HOM05D001549 ORTHO05D003098 4.7e-12 74.7 54 66.7
Aqoxy3G00553 Aquilegia oxysepala HOM05D001549 ORTHO05D003098 1.4e-11 73.2 51 66.7
Sopen05g006580 Solanum pennellii HOM05D001549 ORTHO05D003098 1.8e-11 72.8 57 64.9
Lj2g0014926 Lotus japonicus HOM05D001549 ORTHO05D003098 2.3e-11 72.4 51 68.6
Lalb_Chr10g0099191 Lupinus albus HOM05D001549 ORTHO05D003098 2.3e-11 72.4 66 59.1
TAR622G1163 Trochodendron aralioides HOM05D001549 ORTHO05D003098 3.0e-11 72.0 50 70.0
PSO017G3096 Papaver somniferum HOM05D001549 ORTHO05D003098 5.2e-11 71.2 57 61.4
Hund05819 Selenicereus undatus HOM05D001549 ORTHO05D003098 6.8e-11 70.9 57 63.2
Sc11g0002660 Simmondsia chinensis HOM05D001549 ORTHO05D003098 6.8e-11 70.9 62 59.7
PGR102G1965 Punica granatum HOM05D001549 ORTHO05D003098 2.0e-10 69.3 57 68.4
BraA07t31133Z Brassica rapa HOM05D001549 ORTHO05D003098 4.4e-10 68.2 57 61.4
BcaC08g46351 Brassica carinata HOM05D001549 ORTHO05D003098 7.5e-10 67.4 57 61.4
A07p35420 Brassica napus HOM05D001549 ORTHO05D003098 7.5e-10 67.4 57 61.4
C06p40820 Brassica napus HOM05D001549 ORTHO05D003098 7.5e-10 67.4 57 61.4
BolC6t39351H Brassica oleracea HOM05D001549 ORTHO05D003098 7.5e-10 67.4 57 61.4
THA.LOC104800376 Tarenaya hassleriana HOM05D001549 ORTHO05D003098 9.8e-10 67.0 57 59.6
Thhalv10018133m.g Eutrema salsugineum HOM05D001549 ORTHO05D003098 1.3e-09 66.6 52 61.5
VMungo1215G3135 Vigna mungo HOM05D001549 ORTHO05D003098 1.3e-09 66.6 41 75.6
AT1G69020 Arabidopsis thaliana HOM05D001549 ORTHO05D003098 1.7e-09 66.2 57 59.6
Ah.02g126710 Amaranthus hybridus HOM05D001549 ORTHO05D003098 2.2e-09 65.9 57 59.6
EL10Ac6g14671 Beta vulgaris HOM05D001549 ORTHO05D003098 2.2e-09 65.9 57 61.4
CANSAT64G0623 Cannabis sativa HOM05D001549 ORTHO05D003098 2.8e-09 65.5 57 63.2
Migut.L01160 Erythranthe guttata HOM05D001549 ORTHO05D003098 2.8e-09 65.5 55 52.7
Gohir.A12G159300 Gossypium hirsutum HOM05D001549 ORTHO05D003098 2.8e-09 65.5 57 57.9
Gohir.D12G162600 Gossypium hirsutum HOM05D001549 ORTHO05D003098 2.8e-09 65.5 57 57.9
Cfa008848 Carpinus fangiana HOM05D001549 ORTHO05D003098 6.3e-09 64.3 51 62.7
Sp5g24130 Schrenkiella parvula HOM05D001549 ORTHO05D003098 1.4e-08 63.2 52 59.6
CARHR061890 Cardamine hirsuta HOM05D001549 ORTHO05D003098 1.8e-08 62.8 55 60.0
BcaB03g15870 Brassica carinata HOM05D001549 ORTHO05D003098 2.4e-08 62.4 57 56.1
Haze_11855 Corylus avellana HOM05D001549 ORTHO05D003098 3.1e-08 62.0 50 62.0
Dinv15581 Davidia involucrata HOM05D001549 ORTHO05D003098 3.1e-08 62.0 57 50.9
arahy.Tifrunner.gnm1.ann1.HJR4BH Arachis hypogaea HOM05D001549 ORTHO05D003098 4.1e-08 61.6 65 52.3
AUR62003056 Chenopodium quinoa HOM05D001549 ORTHO05D003098 4.1e-08 61.6 57 56.1
Sabra10G0106200 Salix brachista HOM05D001549 ORTHO05D003098 1.2e-07 60.1 50 62.0
AUR62007871 Chenopodium quinoa HOM05D001549 ORTHO05D003098 1.6e-07 59.7 41 68.3
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 1.6e-07 59.7 40 70.0
arahy.Tifrunner.gnm1.ann1.BS6WTF Arachis hypogaea HOM05D001549 ORTHO05D003098 2.0e-07 59.3 65 50.8
Nitab4.5_0000027g0370 Nicotiana tabacum HOM05D001549 ORTHO05D003098 1.3e-06 56.6 50 56.0
Prupe.1G293900 Prunus persica HOM05D001549 ORTHO05D003098 5.0e-06 54.7 50 52.0
Os09g0475700 Oryza sativa ssp. japonica HOM05D001549 ORTHO05D003098 6.6e-06 54.3 58 51.7


User provided reference genes

Program Settings