Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5265 Trifolium pratense HOM05D007653 ORTHO05D009670 1.4e-148 529.6 271 100.0
Medtr4g014670 Medicago truncatula HOM05D007653 ORTHO05D009670 3.1e-116 422.2 277 83.8
Psat7g247360 Pisum sativum HOM05D007653 ORTHO05D009670 5.8e-107 391.3 276 79.3
Lj3g0004323 Lotus japonicus HOM05D007653 ORTHO05D009670 5.9e-75 285.0 290 60.0
Glyma.03G051200 Glycine max HOM05D007653 ORTHO05D009670 1.5e-73 280.4 288 61.5
Glyma.01G124000 Glycine max HOM05D007653 ORTHO05D009670 7.2e-73 278.1 290 59.7
VMungo0331G0216 Vigna mungo HOM05D007653 ORTHO05D009670 2.7e-72 276.2 294 58.8
Phvul.010G060900 Phaseolus vulgaris HOM05D007653 ORTHO05D009670 1.5e-70 270.4 294 57.1
Lalb_Chr12g0207101 Lupinus albus HOM05D007653 ORTHO05D009670 1.3e-58 230.7 272 55.5
Ca_20332_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 2.8e-53 213.0 237 57.8
Glyma.07G154000 Glycine max HOM05D007653 ORTHO05D009670 2.3e-50 203.4 289 49.5
Ca_07676_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 2.1e-48 196.8 278 50.7
VMungo1383G1231 Vigna mungo HOM05D007653 ORTHO05D009670 3.4e-46 189.5 292 46.6
Medtr7g069710 Medicago truncatula HOM05D007653 ORTHO05D009670 1.3e-45 187.6 279 49.1
TPR.G21326 Trifolium pratense HOM05D007653 ORTHO05D009670 7.0e-44 181.8 275 46.9
Phvul.008G094700 Phaseolus vulgaris HOM05D001497 ORTHO05D001707 5.0e-42 175.6 274 47.1
arahy.Tifrunner.gnm1.ann1.4LI2NJ Arachis hypogaea HOM05D007653 ORTHO05D009670 7.3e-41 171.8 241 51.9
QL07p034260 Quercus lobata HOM05D007653 ORTHO05D009670 1.4e-36 157.5 290 41.7
Lalb_Chr01g0023261 Lupinus albus HOM05D007653 ORTHO05D009670 2.4e-36 156.8 320 40.9
CiPaw.10G159500 Carya illinoinensis HOM05D007653 ORTHO05D009670 7.0e-36 155.2 286 42.0
Manes.09G109500 Manihot esculenta HOM05D007653 ORTHO05D009670 1.6e-35 154.1 290 39.3
Cfa017149 Carpinus fangiana HOM05D007653 ORTHO05D009670 6.6e-34 148.7 299 39.1
Gohir.A01G229000 Gossypium hirsutum HOM05D007653 ORTHO05D009670 3.3e-33 146.4 250 42.4
Gorai.002G265600 Gossypium raimondii HOM05D007653 ORTHO05D009670 4.3e-33 146.0 251 42.6
Gohir.D01G218900 Gossypium hirsutum HOM05D007653 ORTHO05D009670 1.6e-32 144.1 251 42.2
TWI74G0740 Tripterygium wilfordii HOM05D007653 ORTHO05D009670 1.5e-30 137.5 264 39.8
Prupe.6G282500 Prunus persica HOM05D007653 ORTHO05D009670 3.4e-30 136.3 280 39.6
MD04G1163000 Malus domestica HOM05D007653 ORTHO05D009670 7.5e-30 135.2 261 39.5
Potri.016G123700 Populus trichocarpa HOM05D007653 ORTHO05D009670 7.5e-30 135.2 270 37.8
Thecc.05G009700 Theobroma cacao HOM05D007653 ORTHO05D009670 1.3e-29 134.4 290 36.2
Ciclev10012426m.g Citrus clementina HOM05D007653 ORTHO05D009670 8.3e-29 131.7 280 37.9
Duzib093G1250 Durio zibethinus HOM05D007653 ORTHO05D009670 1.9e-28 130.6 268 38.8
TAR369G0435 Trochodendron aralioides HOM05D007653 ORTHO05D009670 1.6e-27 127.5 290 37.2
RcHm_v2.0_Chr3g0462281 Rosa chinensis HOM05D007653 ORTHO05D009670 3.5e-27 126.3 281 37.4
Atru.chr8.2298 Acer truncatum HOM05D007653 ORTHO05D009670 3.0e-26 123.2 304 36.2
Actinidia20753 Actinidia chinensis HOM05D007653 ORTHO05D009670 8.6e-26 121.7 257 36.6
Dinv08443 Davidia involucrata HOM05D007653 ORTHO05D009670 1.5e-25 120.9 284 34.9
Eucgr.K00125 Eucalyptus grandis HOM05D007653 ORTHO05D009670 1.5e-25 120.9 246 39.0
FAN05G3332 Fragaria x ananassa HOM05D007653 ORTHO05D009670 1.9e-25 120.6 287 36.6
Haze_21051 Corylus avellana HOM05D007653 ORTHO05D009670 2.5e-25 120.2 269 33.5
COL.COLO4_14486 Corchorus olitorius HOM05D007653 ORTHO05D009670 4.3e-25 119.4 280 35.7
FAN14G3858 Fragaria x ananassa HOM05D001497 ORTHO05D001619 1.6e-24 117.5 266 38.3
Cpa.g.sc120.35 Carica papaya HOM05D007653 ORTHO05D009670 2.1e-24 117.1 268 36.2
Aqoxy2G00810 Aquilegia oxysepala HOM05D007653 ORTHO05D009670 4.7e-24 115.9 268 35.1
DCAR_028874 Daucus carota HOM05D007653 ORTHO05D009670 6.2e-24 115.5 245 36.7
Sabra16G0118500 Salix brachista HOM05D007653 ORTHO05D009670 2.4e-23 113.6 295 35.9
Oeu057628.1 Olea europaea HOM05D007653 ORTHO05D009670 8.9e-23 111.7 237 36.3
MELO3C026011.2 Cucumis melo HOM05D007653 ORTHO05D009670 2.6e-22 110.2 269 36.8
ClCG04G006820 Citrullus lanatus HOM05D007653 ORTHO05D009670 7.6e-22 108.6 285 34.4
CsaV3_4G026460 Cucumis sativus L. HOM05D007653 ORTHO05D009670 2.9e-21 106.7 273 35.2
Sc07g0006490 Simmondsia chinensis HOM05D007653 ORTHO05D009670 3.8e-21 106.3 294 34.0
ECA247G1536 Erigeron canadensis HOM05D007653 ORTHO05D009670 1.9e-20 104.0 245 37.6
EL10Ac5g12516 Beta vulgaris HOM05D007653 ORTHO05D009670 2.4e-20 103.6 241 34.0
Sed0001003 Sechium edule HOM05D007653 ORTHO05D009670 3.2e-20 103.2 262 35.5
Nn2g10953 Nelumbo nucifera HOM05D007653 ORTHO05D009670 2.1e-19 100.5 263 33.8
Actinidia32531 Actinidia chinensis HOM05D007653 ORTHO05D009670 7.8e-19 98.6 239 37.2
Lsat_1_v5_gn_9_37441 Lactuca sativa HOM05D007653 ORTHO05D009670 1.3e-18 97.8 246 35.4
AUR62030507 Chenopodium quinoa HOM05D007653 ORTHO05D009670 6.6e-18 95.5 247 34.4
Migut.L02038 Erythranthe guttata HOM05D007653 ORTHO05D009670 4.3e-17 92.8 256 34.0
BcaB01g00421 Brassica carinata HOM05D007653 ORTHO05D009670 3.6e-16 89.7 265 32.8
BcaB01g00481 Brassica carinata HOM05D007653 ORTHO05D009670 4.7e-16 89.4 270 32.2
C08p26990 Brassica napus HOM05D007653 ORTHO05D009670 4.7e-16 89.4 270 32.2
BolC8t50316H Brassica oleracea HOM05D007653 ORTHO05D009670 4.7e-16 89.4 270 32.2
Thhalv10010652m.g Eutrema salsugineum HOM05D007653 ORTHO05D009670 4.7e-16 89.4 260 31.5
Rhsim04G0175600 Rhododendron simsii HOM05D007653 ORTHO05D009670 4.7e-16 89.4 241 33.6
A09p44930 Brassica napus HOM05D007653 ORTHO05D009670 5.3e-15 85.9 265 31.7
BraA09t39952Z Brassica rapa HOM05D007653 ORTHO05D009670 5.3e-15 85.9 265 31.7
Sp5g10510 Schrenkiella parvula HOM05D007653 ORTHO05D009670 5.3e-15 85.9 264 30.7
AT3G51760 Arabidopsis thaliana HOM05D007653 ORTHO05D009670 1.2e-14 84.7 262 32.4
AL5G32220 Arabidopsis lyrata HOM05D007653 ORTHO05D009670 2.6e-14 83.6 258 30.6
CARHR161390 Cardamine hirsuta HOM05D007653 ORTHO05D009670 2.6e-14 83.6 259 30.1
Solyc09g005020.1 Solanum lycopersicum HOM05D007653 ORTHO05D009670 1.7e-13 80.9 263 31.2
FAN09G3847 Fragaria x ananassa HOM05D007653 ORTHO05D009670 2.2e-13 80.5 243 32.1
Peaxi162Scf01132g00319 Petunia axillaris HOM05D007653 ORTHO05D009670 2.9e-13 80.1 236 33.5
CAN.G588.49 Capsicum annuum HOM05D007653 ORTHO05D009670 1.1e-12 78.2 265 30.9
PGSC0003DMG400026639 Solanum tuberosum HOM05D007653 ORTHO05D009670 2.4e-12 77.0 269 31.2
Carub.0005s1811 Capsella rubella HOM05D007653 ORTHO05D009670 5.4e-12 75.9 259 28.6
Cc06_g00970 Coffea canephora HOM05D001108 ORTHO05D001619 7.1e-12 75.5 194 33.0
Aa31sc892G20 Aethionema arabicum HOM05D007653 ORTHO05D009670 1.2e-11 74.7 250 29.2
Cc06_g00860 Coffea canephora HOM05D007653 ORTHO05D009670 1.2e-11 74.7 266 29.3
PSO339G6297 Papaver somniferum HOM05D007653 ORTHO05D009670 1.6e-11 74.3 233 32.6
SGA_v2.0_scaffold110G31197 Striga asiatica HOM05D007653 ORTHO05D009670 2.7e-11 73.6 235 30.2
Nitab4.5_0009553g0030 Nicotiana tabacum HOM05D007653 ORTHO05D009670 4.6e-11 72.8 255 29.4
Nn7g37369 Nelumbo nucifera HOM05D007653 ORTHO05D009670 6.0e-11 72.4 182 33.5
AUR62030786 Chenopodium quinoa HOM05D007653 ORTHO05D009670 1.7e-10 70.9 183 36.1
THA.LOC104806615 Tarenaya hassleriana HOM05D007653 ORTHO05D009670 1.7e-10 70.9 269 27.5
FAN02G3974 Fragaria x ananassa HOM05D007653 ORTHO05D009670 1.3e-08 64.7 139 39.6
Nn6g33585 Nelumbo nucifera HOM05D007653 ORTHO05D009670 2.8e-08 63.5 272 26.1
Aa31LG5G5900 Aethionema arabicum HOM05D002063 ORTHO05D002075 7.6e-06 55.5 199 28.6
Psat5g276520 Pisum sativum HOM05D002063 ORTHO05D002075 9.9e-06 55.1 168 31.0


User provided reference genes

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