Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5217 Trifolium pratense HOM05D036547 ORTHO05D022363 8.9e-133 476.9 229 100.0
Psat0s5568g0040 Pisum sativum HOM05D036547 ORTHO05D022363 8.6e-51 204.5 203 51.2
Psat0s969g0040 Pisum sativum HOM05D036547 ORTHO05D022363 8.6e-51 204.5 201 51.7
Ca_05673_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 3.5e-44 182.6 159 57.2
Psat2g054960 Pisum sativum HOM05D000139 ORTHO05D022363 5.0e-43 178.7 182 48.9
Ca_05667_v3 Cicer arietinum L. HOM05D000139 ORTHO05D022363 3.1e-24 116.3 197 34.5
SHI19224 Sapria himalayana HOM05D000139 ORTHO05D000103 8.7e-11 71.6 91 40.7
Lalb_Chr04g0251951 Lupinus albus HOM05D000139 ORTHO05D000103 1.5e-10 70.9 115 34.8
Duzib170G1135 Durio zibethinus HOM05D000139 ORTHO05D000103 2.5e-10 70.1 91 38.5
Ca_05656_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 5.6e-10 68.9 115 34.8
Medtr5g073450 Medicago truncatula HOM05D000139 ORTHO05D000103 7.3e-10 68.6 91 38.5
Lalb_Chr17g0345331 Lupinus albus HOM05D000139 ORTHO05D000103 1.3e-09 67.8 84 44.0
Sopen08g019740 Solanum pennellii HOM05D000139 ORTHO05D000103 1.6e-09 67.4 92 37.0
PGSC0003DMG400025456 Solanum tuberosum HOM05D000139 ORTHO05D000103 1.6e-09 67.4 92 37.0
Dinv09675 Davidia involucrata HOM05D000139 ORTHO05D000103 2.1e-09 67.0 91 38.5
Dinv28698 Davidia involucrata HOM05D000139 ORTHO05D000103 2.1e-09 67.0 91 39.6
arahy.Tifrunner.gnm1.ann1.624Y80 Arachis hypogaea HOM05D000139 ORTHO05D010351 2.8e-09 66.6 84 41.7
CAN.G369.1 Capsicum annuum HOM05D000139 ORTHO05D000103 2.8e-09 66.6 92 37.0
Solyc08g066070.1 Solanum lycopersicum HOM05D000139 ORTHO05D000103 2.8e-09 66.6 92 37.0
Psat2g054720 Pisum sativum HOM05D000139 ORTHO05D000103 3.6e-09 66.2 115 32.2
Glyma.02G232100 Glycine max HOM05D000139 ORTHO05D000103 4.8e-09 65.9 101 36.6
QL01p026188 Quercus lobata HOM05D000139 ORTHO05D000103 4.8e-09 65.9 91 38.5
SGA_v2.0_scaffold120G32957 Striga asiatica HOM05D000139 ORTHO05D000103 4.8e-09 65.9 115 32.2
Thecc.09G358100 Theobroma cacao HOM05D000139 ORTHO05D000103 4.8e-09 65.9 91 38.5
CANSAT54G2103 Cannabis sativa HOM05D000139 ORTHO05D000103 6.2e-09 65.5 92 39.1
Manes.02G217200 Manihot esculenta HOM05D000139 ORTHO05D000103 6.2e-09 65.5 91 37.4
arahy.Tifrunner.gnm1.ann1.MWQM2H Arachis hypogaea HOM05D000139 ORTHO05D010351 8.1e-09 65.1 137 30.7
C03p14350 Brassica napus HOM05D000139 ORTHO05D000103 8.1e-09 65.1 91 38.5
BolC3t13879H Brassica oleracea HOM05D000139 ORTHO05D000103 8.1e-09 65.1 91 38.5
BraA03t10535Z Brassica rapa HOM05D000139 ORTHO05D000103 8.1e-09 65.1 91 38.5
COL.COLO4_11157 Corchorus olitorius HOM05D000139 ORTHO05D000103 8.1e-09 65.1 91 38.5
Lalb_Chr17g0345401 Lupinus albus HOM05D000139 ORTHO05D000103 8.1e-09 65.1 91 38.5
Potri.019G124000 Populus trichocarpa HOM05D000139 ORTHO05D000103 8.1e-09 65.1 95 34.7
arahy.Tifrunner.gnm1.ann1.9GG7V0 Arachis hypogaea HOM05D000139 ORTHO05D000103 1.1e-08 64.7 91 37.4
arahy.Tifrunner.gnm1.ann1.X9R2CE Arachis hypogaea HOM05D000139 ORTHO05D000103 1.1e-08 64.7 91 37.4
Duzib168G1779 Durio zibethinus HOM05D000139 ORTHO05D000103 1.1e-08 64.7 91 38.5
Gohir.D03G143200 Gossypium hirsutum HOM05D000139 ORTHO05D000103 1.1e-08 64.7 91 37.4
Gorai.003G150400 Gossypium raimondii HOM05D000139 ORTHO05D000103 1.1e-08 64.7 91 37.4
Oeu019271.1 Olea europaea HOM05D000139 ORTHO05D000103 1.1e-08 64.7 91 38.5
Phvul.008G252200 Phaseolus vulgaris HOM05D000139 ORTHO05D000103 1.1e-08 64.7 91 36.3
Glyma.02G232000 Glycine max HOM05D000139 ORTHO05D010351 1.4e-08 64.3 152 32.2
Glyma.14G199200 Glycine max HOM05D000139 ORTHO05D000103 1.4e-08 64.3 91 36.3
BcaB01g04522 Brassica carinata HOM05D000139 ORTHO05D000103 1.8e-08 63.9 91 37.4
Lj1P126T10 Lonicera japonica HOM05D000139 ORTHO05D000103 1.8e-08 63.9 91 37.4
LjContig00141g0015443 Lotus japonicus HOM05D000139 ORTHO05D000103 1.8e-08 63.9 91 38.5
THA.LOC104799384 Tarenaya hassleriana HOM05D000139 ORTHO05D000103 1.8e-08 63.9 91 37.4
CSS0041350 Camellia sinensis var. sinensis HOM05D000139 ORTHO05D000103 2.4e-08 63.5 91 37.4
Gohir.A03G025300 Gossypium hirsutum HOM05D000139 ORTHO05D000103 2.4e-08 63.5 91 36.3
Aqoxy2G00500 Aquilegia oxysepala HOM05D000139 ORTHO05D000103 3.1e-08 63.2 109 32.1
Ciclev10028037m.g Citrus clementina HOM05D000139 ORTHO05D000103 3.1e-08 63.2 91 34.1
Nitab4.5_0005130g0020 Nicotiana tabacum HOM05D000139 ORTHO05D000103 3.1e-08 63.2 91 35.2
GSVIVG01024631001 Vitis vinifera HOM05D000139 ORTHO05D000103 3.1e-08 63.2 91 36.3
Carub.0008s1902 Capsella rubella HOM05D000139 ORTHO05D000103 4.0e-08 62.8 91 36.3
TWI75G1510 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 4.0e-08 62.8 91 37.4
Aa31LG11G210 Aethionema arabicum HOM05D000139 ORTHO05D000103 5.3e-08 62.4 91 36.3
MSTRG.12690 Avicennia marina HOM05D000139 ORTHO05D000103 5.3e-08 62.4 89 37.1
MSTRG.18552 Avicennia marina HOM05D000139 ORTHO05D000103 5.3e-08 62.4 90 36.7
Nitab4.5_0000719g0010 Nicotiana tabacum HOM05D000139 ORTHO05D000103 5.3e-08 62.4 91 34.1
Prupe.6G048000 Prunus persica HOM05D000139 ORTHO05D000103 5.3e-08 62.4 91 36.3
Sp6g20120 Schrenkiella parvula HOM05D000139 ORTHO05D000103 5.3e-08 62.4 91 36.3
AL8G34620 Arabidopsis lyrata HOM05D000139 ORTHO05D000103 6.9e-08 62.0 91 36.3
AT5G58430 Arabidopsis thaliana HOM05D000139 ORTHO05D000103 6.9e-08 62.0 91 36.3
MSTRG.17894 Avicennia marina HOM05D000139 ORTHO05D000103 6.9e-08 62.0 91 36.3
A02p07700 Brassica napus HOM05D000139 ORTHO05D000103 6.9e-08 62.0 91 35.2
BraA02t05845Z Brassica rapa HOM05D000139 ORTHO05D000103 6.9e-08 62.0 91 35.2
Cpa.g.sc2.351 Carica papaya HOM05D000139 ORTHO05D000103 6.9e-08 62.0 91 36.3
Nn5g28338 Nelumbo nucifera HOM05D000139 ORTHO05D000103 6.9e-08 62.0 96 34.4
PSO765G0115 Papaver somniferum HOM05D000139 ORTHO05D000103 6.9e-08 62.0 151 26.5
Cfa011781 Carpinus fangiana HOM05D000139 ORTHO05D000103 9.0e-08 61.6 91 37.4
DCAR_018216 Daucus carota HOM05D000139 ORTHO05D000103 9.0e-08 61.6 91 35.2
DCAR_018232 Daucus carota HOM05D000139 ORTHO05D000103 9.0e-08 61.6 91 35.2
TWI31G1381 Tripterygium wilfordii HOM05D000139 ORTHO05D000103 9.0e-08 61.6 91 36.3
Actinidia32607 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 36.3
BcaC03g14096 Brassica carinata HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 35.2
BolC2t07447H Brassica oleracea HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 35.2
CARHR272260 Cardamine hirsuta HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 35.2
Haze_24414 Corylus avellana HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 37.4
Thhalv10012970m.g Eutrema salsugineum HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 35.2
FvH4_3g39790 Fragaria vesca HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 36.3
FAN11G2669 Fragaria x ananassa HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 36.3
FAN16G3339 Fragaria x ananassa HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 36.3
FAN25G3566 Fragaria x ananassa HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 36.3
MD03G1056800 Malus domestica HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 34.1
Peaxi162Scf00055g00142 Petunia axillaris HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 35.2
RcHm_v2.0_Chr5g0071681 Rosa chinensis HOM05D000139 ORTHO05D000103 1.2e-07 61.2 91 36.3
Manes.18G145487 Manihot esculenta HOM05D000139 ORTHO05D000103 1.5e-07 60.8 91 37.4
Potri.013G152900 Populus trichocarpa HOM05D000139 ORTHO05D000103 1.5e-07 60.8 90 36.7
BcaB05g22430 Brassica carinata HOM05D000139 ORTHO05D000103 2.0e-07 60.5 91 34.1
PSO349G0061 Papaver somniferum HOM05D000139 ORTHO05D000103 2.0e-07 60.5 92 33.7
PGR119G0232 Punica granatum HOM05D000139 ORTHO05D000103 2.0e-07 60.5 91 35.2
TPR.G27413 Trifolium pratense HOM05D000139 ORTHO05D000103 2.0e-07 60.5 93 37.6
CiPaw.13G068900 Carya illinoinensis HOM05D000139 ORTHO05D000103 2.6e-07 60.1 91 36.3
Atru.chr3.4116 Acer truncatum HOM05D000139 ORTHO05D000103 3.4e-07 59.7 91 35.2
C02p13350 Brassica napus HOM05D000139 ORTHO05D000103 3.4e-07 59.7 91 35.2
ClCG03G000430 Citrullus lanatus HOM05D000139 ORTHO05D000103 3.4e-07 59.7 91 35.2
SGA_v2.0_scaffold146G36119 Striga asiatica HOM05D000139 ORTHO05D000103 3.4e-07 59.7 113 30.1
vmacro02914 Vaccinium macrocarpon HOM05D000139 ORTHO05D000103 4.4e-07 59.3 91 35.2
Cc01_g14880 Coffea canephora HOM05D000139 ORTHO05D000103 5.8e-07 58.9 91 34.1
Medtr3g031130 Medicago truncatula HOM05D000139 ORTHO05D000103 5.8e-07 58.9 91 35.2
Medtr5g073620 Medicago truncatula HOM05D000139 ORTHO05D010351 5.8e-07 58.9 93 35.5
TAR633G2387 Trochodendron aralioides HOM05D000139 ORTHO05D000103 5.8e-07 58.9 91 34.1
MSTRG.21241 Avicennia marina HOM05D000139 ORTHO05D000103 7.6e-07 58.5 96 34.4
Ca_15011_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 7.6e-07 58.5 93 34.4
Ca_30360_v3 Cicer arietinum L. HOM05D000139 ORTHO05D000103 7.6e-07 58.5 93 34.4
Psat2g054640 Pisum sativum HOM05D000139 ORTHO05D000103 7.6e-07 58.5 92 35.9
Peaxi162Scf00089g00063 Petunia axillaris HOM05D000139 ORTHO05D000103 1.3e-06 57.8 93 32.3
Psat5g154400 Pisum sativum HOM05D000139 ORTHO05D000103 1.3e-06 57.8 93 33.3
SalBow2G1216 Salvia bowleyana HOM05D000139 ORTHO05D000103 1.3e-06 57.8 89 34.8
Nitab4.5_0004750g0070 Nicotiana tabacum HOM05D000139 ORTHO05D000103 1.7e-06 57.4 92 31.5
Nitab4.5_0005560g0010 Nicotiana tabacum HOM05D000139 ORTHO05D000103 1.7e-06 57.4 92 31.5
Sc21g0005300 Simmondsia chinensis HOM05D000139 ORTHO05D000103 1.7e-06 57.4 93 32.3
TPR.G25703 Trifolium pratense HOM05D000139 ORTHO05D000103 1.7e-06 57.4 91 34.1
COL.COLO4_13306 Corchorus olitorius HOM05D000139 ORTHO05D000103 3.8e-06 56.2 98 31.6
Glyma.06G201100 Glycine max HOM05D000139 ORTHO05D010351 3.8e-06 56.2 106 32.1
Oeu005009.1 Olea europaea HOM05D000139 ORTHO05D000103 4.9e-06 55.8 95 28.4
Dinv04883 Davidia involucrata HOM05D000139 ORTHO05D000103 6.4e-06 55.5 90 28.9
Dinv23137 Davidia involucrata HOM05D000139 ORTHO05D000103 6.4e-06 55.5 90 28.9
TPR.G17762 Trifolium pratense HOM05D000139 ORTHO05D000103 6.4e-06 55.5 91 34.1


User provided reference genes

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