Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5059 Trifolium pratense HOM05D009380 ORTHO05D009933 4.1e-192 674.5 320 100.0
TPR.G8428 Trifolium pratense HOM05D009380 ORTHO05D009933 2.1e-143 512.7 271 89.3
TPR.G31202 Trifolium pratense HOM05D009380 ORTHO05D009933 4.7e-132 474.9 303 70.0
TPR.G24026 Trifolium pratense HOM05D009380 ORTHO05D009933 3.1e-131 472.2 306 72.2
TPR.G30446 Trifolium pratense HOM05D009380 ORTHO05D009933 1.6e-124 449.9 309 69.3
TPR.G13664 Trifolium pratense HOM05D009380 ORTHO05D009933 6.2e-124 448.0 306 69.3
TPR.G14242 Trifolium pratense HOM05D009380 ORTHO05D009933 3.4e-122 442.2 292 69.2
TPR.G1696 Trifolium pratense HOM05D009380 ORTHO05D009933 7.4e-101 371.3 266 68.0
TPR.G25329 Trifolium pratense HOM05D009380 ORTHO05D009933 1.8e-91 340.1 283 58.7
TPR.G2390 Trifolium pratense HOM05D009380 ORTHO05D009933 1.9e-64 250.4 163 72.4
TPR.G15794 Trifolium pratense HOM05D009380 ORTHO05D009933 4.1e-59 232.6 161 62.7
TPR.G24530 Trifolium pratense HOM05D000020 ORTHO05D001617 2.0e-58 230.3 157 68.8
Medtr6g465600 Medicago truncatula HOM05D009380 ORTHO05D009933 9.5e-40 168.3 294 32.7
TPR.G38560 Trifolium pratense HOM05D009380 ORTHO05D009933 3.1e-38 163.3 293 35.8
TPR.G14420 Trifolium pratense HOM05D009380 ORTHO05D009933 5.2e-38 162.5 169 49.1
Medtr1g052720 Medicago truncatula HOM05D009380 ORTHO05D009933 3.4e-37 159.8 271 35.1
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 7.3e-32 142.1 279 34.4
Psat0ss4104g0080 Pisum sativum HOM05D008463 ORTHO05D009933 3.1e-30 136.7 237 32.1
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 9.9e-29 131.7 228 34.6
TPR.G37624 Trifolium pratense HOM05D009380 ORTHO05D009933 3.2e-27 126.7 136 41.2
Medtr1g105765 Medicago truncatula HOM05D008463 ORTHO05D009933 3.9e-25 119.8 270 28.1
Medtr1g105780 Medicago truncatula HOM05D008463 ORTHO05D009933 6.6e-25 119.0 270 27.8
Medtr3g048970 Medicago truncatula HOM05D008463 ORTHO05D009933 1.2e-23 114.8 253 28.5
Medtr0091s0080 Medicago truncatula HOM05D009380 ORTHO05D009933 2.8e-23 113.6 274 26.6
Medtr7g110090 Medicago truncatula HOM05D008463 ORTHO05D009933 2.8e-23 113.6 243 28.8
TPR.G39667 Trifolium pratense HOM05D051494 ORTHO05D034650 4.7e-23 112.8 59 86.4
Medtr1g084880 Medicago truncatula HOM05D008463 ORTHO05D009933 6.2e-23 112.5 253 28.5
Medtr3g070250 Medicago truncatula HOM05D008463 ORTHO05D009933 8.9e-22 108.6 212 29.7
Medtr0246s0040 Medicago truncatula HOM05D009380 ORTHO05D009933 1.5e-21 107.8 233 25.8
Medtr2g100360 Medicago truncatula HOM05D008463 ORTHO05D009933 1.5e-21 107.8 236 29.7
Medtr0091s0090 Medicago truncatula HOM05D009380 ORTHO05D009933 1.1e-19 101.7 196 30.1
Medtr4g032580 Medicago truncatula HOM05D008463 ORTHO05D009933 1.6e-18 97.8 243 25.9
TPR.G26610 Trifolium pratense HOM05D009380 ORTHO05D009933 6.0e-18 95.9 101 43.6
Medtr4g032560 Medicago truncatula HOM05D008463 ORTHO05D009933 1.3e-17 94.7 243 25.5
Medtr1g087870 Medicago truncatula HOM05D008463 ORTHO05D009933 1.7e-17 94.4 236 26.3
Medtr4g062370 Medicago truncatula HOM05D000096 ORTHO05D000045 2.3e-17 94.0 224 27.2
Medtr1g047540 Medicago truncatula HOM05D008463 ORTHO05D009933 1.1e-16 91.7 264 26.5
TPR.G9575 Trifolium pratense HOM05D003216 ORTHO05D009933 1.6e-15 87.8 251 27.5
TPR.G1068 Trifolium pratense HOM05D009380 ORTHO05D009933 1.4e-14 84.7 46 80.4
Medtr3g452180 Medicago truncatula HOM05D008463 ORTHO05D009933 2.0e-13 80.9 183 27.3
Medtr5g066660 Medicago truncatula HOM05D008463 ORTHO05D009933 3.8e-12 76.6 245 26.9
TPR.G21729 Trifolium pratense HOM05D003813 ORTHO05D004557 5.4e-11 72.8 124 31.5
TPR.G23664 Trifolium pratense HOM05D000589 ORTHO05D000401 7.1e-11 72.4 112 37.5
Medtr1g023840 Medicago truncatula HOM05D009380 ORTHO05D009933 1.2e-10 71.6 95 33.7
Medtr4g117740 Medicago truncatula HOM05D008463 ORTHO05D009933 1.0e-09 68.6 166 28.3
TPR.G35877 Trifolium pratense HOM05D001645 ORTHO05D001749 1.0e-09 68.6 103 39.8
TPR.G15809 Trifolium pratense HOM05D008463 ORTHO05D009933 1.7e-09 67.8 117 29.1
FAN19G1815 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.1e-08 65.1 91 33.0
Medtr7g050355 Medicago truncatula HOM05D000096 ORTHO05D000045 1.5e-08 64.7 67 44.8
Glyma.08G339100 Glycine max HOM05D000395 ORTHO05D000088 1.9e-08 64.3 265 23.0
FAN28G1435 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.5e-08 63.9 86 33.7
FvH4_1g14700 Fragaria vesca HOM05D000395 ORTHO05D000088 3.3e-08 63.5 86 33.7
FAN26G1384 Fragaria x ananassa HOM05D000395 ORTHO05D000088 5.6e-08 62.8 85 34.1
arahy.Tifrunner.gnm1.ann1.SK09KG Arachis hypogaea HOM05D003661 ORTHO05D004201 2.1e-07 60.8 221 23.5
TPR.G5050 Trifolium pratense HOM05D008463 ORTHO05D009933 1.1e-06 58.5 109 33.9
FAN23G2287 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.1e-06 57.0 89 30.3
arahy.Tifrunner.gnm1.ann1.T2JQ0Z Arachis hypogaea HOM05D003661 ORTHO05D004201 4.0e-06 56.6 200 26.0
TPR.G24646 Trifolium pratense HOM05D008463 ORTHO05D009933 5.3e-06 56.2 100 36.0
Medtr5g094740 Medicago truncatula HOM05D003834 ORTHO05D004483 6.9e-06 55.8 154 29.9
TPR.G38168 Trifolium pratense HOM05D009380 ORTHO05D009933 6.9e-06 55.8 65 35.4
Medtr3g449750 Medicago truncatula HOM05D008463 ORTHO05D009933 9.0e-06 55.5 150 28.0
QL06p036952 Quercus lobata HOM05D000395 ORTHO05D000088 9.0e-06 55.5 95 26.3


User provided reference genes

Program Settings