Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 1.5e-122 443.0 237 100.0
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 8.2e-97 357.5 214 91.1
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 3.9e-83 312.0 215 80.5
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 9.1e-80 300.8 213 77.9
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 2.5e-77 292.7 215 75.8
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 1.8e-75 286.6 211 74.9
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 5.7e-74 281.6 217 74.7
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 9.7e-74 280.8 217 73.3
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 2.8e-73 279.3 215 74.0
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 7.0e-72 274.6 220 71.8
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 1.4e-67 260.4 167 86.8
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.1e-56 224.2 216 63.9
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.1e-56 224.2 216 63.9
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 2.7e-55 219.5 158 77.2
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 3.5e-55 219.2 182 69.8
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 5.9e-55 218.4 207 65.7
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 7.7e-55 218.0 231 60.2
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 1.5e-53 213.8 164 75.6
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 1.9e-53 213.4 174 73.6
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.9e-53 213.4 159 78.0
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 1.9e-53 213.4 199 60.8
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 2.5e-53 213.0 222 60.4
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 2.5e-53 213.0 213 59.6
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 4.2e-53 212.2 180 67.8
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 5.5e-53 211.8 214 59.8
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 1.6e-52 210.3 173 70.5
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 2.1e-52 209.9 176 66.5
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 4.7e-52 208.8 226 58.4
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 6.1e-52 208.4 216 61.6
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 1.0e-51 207.6 218 60.6
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 3.0e-51 206.1 162 74.1
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.2e-50 204.1 159 71.7
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.5e-50 203.8 161 73.3
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 1.5e-50 203.8 161 73.3
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.6e-50 203.0 217 59.9
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 4.4e-50 202.2 206 62.1
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 7.5e-50 201.4 210 60.5
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 9.8e-50 201.1 209 58.9
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 2.2e-49 199.9 211 59.7
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 3.7e-49 199.1 197 59.9
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 4.9e-49 198.7 227 58.1
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 6.3e-49 198.4 209 60.3
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 6.3e-49 198.4 154 72.7
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 6.3e-49 198.4 199 58.3
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 8.3e-49 198.0 158 67.7
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 8.3e-49 198.0 218 58.3
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 8.3e-49 198.0 206 61.2
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 8.3e-49 198.0 213 57.7
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 1.1e-48 197.6 159 68.6
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.4e-48 196.4 217 59.4
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 4.1e-48 195.7 197 59.9
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.2e-47 194.1 195 60.0
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 2.0e-47 193.4 182 59.9
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 2.7e-47 193.0 209 56.0
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 1.0e-46 191.0 217 56.7
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.3e-46 190.7 174 64.9
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 1.7e-46 190.3 201 56.7
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 2.3e-46 189.9 140 75.0
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 2.9e-46 189.5 223 53.8
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 5.0e-46 188.7 205 58.0
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 6.6e-46 188.3 163 65.0
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 8.6e-46 188.0 196 61.7
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 8.6e-46 188.0 209 57.9
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 8.6e-46 188.0 163 68.1
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 1.1e-45 187.6 159 66.0
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.5e-45 186.4 227 53.3
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 3.3e-45 186.0 163 65.0
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 7.3e-45 184.9 203 59.1
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 7.3e-45 184.9 117 79.5
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 1.2e-44 184.1 208 56.2
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 2.8e-44 183.0 211 55.9
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 4.7e-44 182.2 185 61.6
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 6.1e-44 181.8 155 66.5
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 1.0e-43 181.0 182 59.9
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.4e-43 180.6 159 65.4
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 1.8e-43 180.3 218 53.2
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 2.3e-43 179.9 208 56.7
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 3.1e-43 179.5 195 57.4
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 3.1e-43 179.5 195 57.4
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 4.0e-43 179.1 195 57.4
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 4.0e-43 179.1 190 57.9
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 4.0e-43 179.1 195 57.4
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 4.0e-43 179.1 215 54.0
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 5.2e-43 178.7 158 63.3
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 2.6e-42 176.4 218 52.8
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 3.4e-42 176.0 162 63.6
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 9.8e-42 174.5 200 55.0
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 3.7e-41 172.6 215 51.6
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 4.9e-41 172.2 148 64.9
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.1e-40 171.0 153 62.1
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 1.4e-40 170.6 171 58.5
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.9e-40 170.2 207 54.1
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 2.4e-40 169.9 109 78.0
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 1.6e-39 167.2 199 54.3
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 3.5e-39 166.0 198 53.0
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 4.6e-39 165.6 198 54.0
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 4.6e-39 165.6 153 60.8
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 1.3e-38 164.1 120 71.7
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 4.3e-37 159.1 181 56.9
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 5.6e-37 158.7 146 67.1
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 1.2e-36 157.5 201 53.2
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.6e-36 157.1 243 44.4
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 4.7e-36 155.6 106 76.4
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 1.8e-35 153.7 156 54.5
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.2e-35 152.1 183 55.7
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 3.4e-34 149.4 106 65.1
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 7.5e-34 148.3 150 56.7
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 7.5e-34 148.3 212 50.0
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 2.2e-33 146.7 137 62.0
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 1.1e-27 127.9 125 55.2
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 1.4e-24 117.5 101 55.4
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 5.4e-24 115.5 125 51.2
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 3.3e-21 106.3 110 50.9
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.8e-17 92.8 145 49.7
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 3.3e-13 79.7 145 48.3
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 5.6e-13 79.0 72 55.6
Ca_23582_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000003 4.9e-09 65.9 39 84.6
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 3.5e-07 59.7 165 33.9


User provided reference genes

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