Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5033 Trifolium pratense HOM05D003057 ORTHO05D003904 3.9e-88 328.2 176 100.0
Psat7g220920 Pisum sativum HOM05D003057 ORTHO05D003904 1.2e-41 173.7 180 58.3
Psat6g164240 Pisum sativum HOM05D003057 ORTHO05D003904 3.6e-41 172.2 184 57.1
Psat7g039600 Pisum sativum HOM05D003057 ORTHO05D003904 3.6e-41 172.2 184 57.1
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 2.4e-29 132.9 169 46.2
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 6.0e-28 128.3 169 45.6
Psat6g044720 Pisum sativum HOM05D003057 ORTHO05D003904 1.4e-24 117.1 136 55.1
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.8e-22 109.0 135 47.4
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.0e-19 100.9 118 46.6
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.7e-19 100.1 138 45.7
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.0e-19 99.4 136 43.4
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-18 97.4 128 45.3
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.5e-18 97.1 114 43.9
COL.COLO4_06538 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.3e-18 95.5 114 46.5
Psat0ss1860g0040 Pisum sativum HOM05D003057 ORTHO05D003904 1.3e-17 94.0 116 44.0
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-16 90.9 114 42.1
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 9.0e-16 87.8 134 40.3
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 2.0e-15 86.7 133 41.4
COL.COLO4_27567 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-14 84.0 120 41.7
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 1.3e-14 84.0 166 40.4
PSO675G6041 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-14 84.0 145 37.2
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 6.4e-14 81.6 139 38.8
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 8.4e-14 81.3 125 37.6
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.4e-14 81.3 115 40.9
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.4e-14 81.3 115 40.9
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-13 80.9 115 40.9
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 1.1e-13 80.9 89 44.9
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 1.9e-13 80.1 155 32.3
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-13 80.1 117 42.7
COL.COLO4_30277 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.2e-13 79.3 79 48.1
Hma1.2p1_1282F.1_g272710 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 3.2e-13 79.3 117 36.8
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 4.2e-13 79.0 138 34.8
PSO832G4354 Papaver somniferum HOM05D003057 ORTHO05D003904 5.4e-13 78.6 137 38.0
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 7.1e-13 78.2 170 34.1
PSO339G3646 Papaver somniferum HOM05D003057 ORTHO05D003904 7.1e-13 78.2 170 34.1
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-12 77.0 170 33.5
PSO210G4431 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-12 77.0 128 40.6
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 1.6e-12 77.0 168 33.3
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 2.7e-12 76.3 123 36.6
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 2.7e-12 76.3 117 38.5
Hma1.2p1_2610F.1_g325360 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 3.5e-12 75.9 113 41.6
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.6e-12 75.5 125 38.4
Psat6g049840 Pisum sativum HOM05D003057 ORTHO05D003904 4.6e-12 75.5 114 48.2
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 6.0e-12 75.1 150 37.3
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 1.0e-11 74.3 118 39.0
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.3e-11 73.2 125 36.8
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.3e-11 73.2 130 37.7
PSO357G0194 Papaver somniferum HOM05D003057 ORTHO05D003904 3.0e-11 72.8 124 38.7
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 3.0e-11 72.8 124 38.7
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 3.9e-11 72.4 103 37.9
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 3.9e-11 72.4 124 38.7
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 3.9e-11 72.4 153 37.9
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 6.7e-11 71.6 124 38.7
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 6.7e-11 71.6 124 38.7
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.7e-11 71.6 115 37.4
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-10 70.9 124 37.9
Psat5g211880 Pisum sativum HOM05D003057 ORTHO05D003904 1.5e-10 70.5 116 45.7
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 1.9e-10 70.1 150 32.7
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 4.3e-10 68.9 124 37.1
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 4.3e-10 68.9 145 31.7
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.3e-10 68.9 117 37.6
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 5.6e-10 68.6 136 36.0
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 7.4e-10 68.2 124 37.9
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.4e-10 68.2 101 34.7
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-09 67.4 170 30.0
PSO675G7907 Papaver somniferum HOM05D000294 ORTHO05D000177 2.1e-09 66.6 145 30.3
SGA_v2.0_scaffold116G32300 Striga asiatica HOM05D003057 ORTHO05D012636 2.8e-09 66.2 100 44.0
TPR.G30646 Trifolium pratense HOM05D002614 ORTHO05D002794 8.1e-09 64.7 45 82.2
Os06g0523701 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 1.4e-08 63.9 103 35.9
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.0e-08 62.4 114 34.2
COL.COLO4_37623 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.0e-08 62.4 117 35.9
Os01g0350500 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 4.0e-08 62.4 118 38.1
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-08 62.4 132 31.8
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-08 62.4 132 31.8
PSO384G2001 Papaver somniferum HOM05D003057 ORTHO05D003904 9.0e-08 61.2 130 30.8
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 1.5e-07 60.5 113 33.6
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 3.4e-07 59.3 103 34.0
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.5e-07 58.9 120 34.2
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.8e-07 58.5 81 39.5
Os10g0117400 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 7.6e-07 58.2 117 30.8
EL10Ac3g06227 Beta vulgaris HOM05D002797 ORTHO05D021453 9.9e-07 57.8 110 34.5
SGA_v2.0_scaffold216G42382 Striga asiatica HOM05D003057 ORTHO05D012636 9.9e-07 57.8 99 43.4
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-06 56.6 81 39.5
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 2.2e-06 56.6 140 35.7
EL10Ac2g02679 Beta vulgaris HOM05D000202 ORTHO05D000117 2.9e-06 56.2 101 39.6
PSO017G5295 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-06 56.2 138 31.2
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 3.8e-06 55.8 132 29.5
SGA_v2.0_scaffold295G47505 Striga asiatica HOM05D003057 ORTHO05D012636 6.4e-06 55.1 124 35.5


User provided reference genes

Program Settings