Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4997 Trifolium pratense HOM05D008230 ORTHO05D010279 3.7e-70 268.1 134 100.0
Medtr4g026350 Medicago truncatula HOM05D008230 ORTHO05D010279 3.4e-47 191.8 140 77.1
Psat7g237760 Pisum sativum HOM05D008230 ORTHO05D010279 2.1e-41 172.6 142 72.5
Glyma.01G136600 Glycine max HOM05D008230 ORTHO05D010279 1.2e-28 130.2 138 58.0
Glyma.03G031600 Glycine max HOM05D008230 ORTHO05D010279 1.7e-27 126.3 141 54.6
Lj3g0026436 Lotus japonicus HOM05D008230 ORTHO05D010279 5.0e-27 124.8 137 58.4
arahy.Tifrunner.gnm1.ann1.MFP8ME Arachis hypogaea HOM05D008230 ORTHO05D010279 2.1e-25 119.4 139 58.3
Lalb_Chr12g0208001 Lupinus albus HOM05D008230 ORTHO05D010279 3.6e-25 118.6 128 54.7
VMungo0331G0239 Vigna mungo HOM05D008230 ORTHO05D010279 1.8e-24 116.3 136 51.5
Lalb_Chr03g0039781 Lupinus albus HOM05D008230 ORTHO05D010279 5.2e-24 114.8 130 54.6
QL04p038908 Quercus lobata HOM05D008230 ORTHO05D010279 9.8e-23 110.5 142 51.4
Phvul.010G077800 Phaseolus vulgaris HOM05D008230 ORTHO05D010279 1.3e-22 110.2 138 51.4
Cfa011173 Carpinus fangiana HOM05D008230 ORTHO05D010279 1.9e-21 106.3 139 51.8
CiPaw.13G032900 Carya illinoinensis HOM05D008230 ORTHO05D010279 3.5e-20 102.1 148 45.9
CiPaw.14G026100 Carya illinoinensis HOM05D008230 ORTHO05D010279 1.0e-19 100.5 147 47.6
Lalb_Chr07g0190181 Lupinus albus HOM05D008230 ORTHO05D010279 6.6e-19 97.8 92 54.3
Haze_02676 Corylus avellana HOM05D008230 ORTHO05D010279 1.8e-16 89.7 139 47.5
Thecc.01G382000 Theobroma cacao HOM05D008230 ORTHO05D010279 3.1e-16 89.0 146 44.5
Cpa.g.sc49.161 Carica papaya HOM05D008230 ORTHO05D010279 5.2e-16 88.2 144 43.8
Gohir.D08G157300 Gossypium hirsutum HOM05D008230 ORTHO05D010279 7.6e-15 84.3 145 40.7
Gorai.004G163600 Gossypium raimondii HOM05D008230 ORTHO05D010279 1.7e-14 83.2 145 40.0
Gohir.A08G136500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 8.4e-14 80.9 144 39.6
Potri.014G060400 Populus trichocarpa HOM05D008230 ORTHO05D010279 1.4e-13 80.1 146 41.1
COL.COLO4_12495 Corchorus olitorius HOM05D008230 ORTHO05D010279 2.4e-13 79.3 121 40.5
Prupe.2G138500 Prunus persica HOM05D008230 ORTHO05D010279 2.4e-13 79.3 161 37.3
Sabra02G0112300 Salix brachista HOM05D008230 ORTHO05D010279 3.2e-13 79.0 143 39.9
MD07G1116200 Malus domestica HOM05D008230 ORTHO05D010279 9.2e-13 77.4 162 36.4
Potri.002G144400 Populus trichocarpa HOM05D008230 ORTHO05D010279 1.2e-12 77.0 150 42.0
Glyma.01G079000 Glycine max HOM05D028576 ORTHO05D029774 1.6e-12 76.6 124 40.3
Manes.05G048600 Manihot esculenta HOM05D008230 ORTHO05D010279 2.1e-12 76.3 146 37.7
PGR004G0323 Punica granatum HOM05D008230 ORTHO05D010279 7.8e-12 74.3 150 36.7
Sabra14G0044300 Salix brachista HOM05D008230 ORTHO05D010279 2.3e-11 72.8 147 40.1
FAN01G0499 Fragaria x ananassa HOM05D008230 ORTHO05D010279 7.3e-10 67.8 163 36.8
Gorai.008G105900 Gossypium raimondii HOM05D008230 ORTHO05D010279 7.3e-10 67.8 138 42.8
CANSAT56G2525 Cannabis sativa HOM05D008230 ORTHO05D010279 9.6e-10 67.4 85 54.1
Dinv43677 Davidia involucrata HOM05D008230 ORTHO05D010279 9.6e-10 67.4 128 40.6
Hma1.2p1_0041F.1_g025330 Hydrangea macrophylla HOM05D008230 ORTHO05D010279 1.2e-09 67.0 147 40.1
FAN06G0210 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.1e-09 66.2 163 37.4
FAN06G3296 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.1e-09 66.2 163 37.4
FAN10G0483 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.1e-09 66.2 163 37.4
FAN10G2770 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.1e-09 66.2 163 37.4
Gohir.D12G097250 Gossypium hirsutum HOM05D008230 ORTHO05D010279 2.8e-09 65.9 135 40.0
FvH4_7g11140 Fragaria vesca HOM05D008230 ORTHO05D010279 3.6e-09 65.5 162 35.8
FAN03G0682 Fragaria x ananassa HOM05D008230 ORTHO05D010279 6.2e-09 64.7 164 37.2
Psat3g164200 Pisum sativum HOM05D008007 ORTHO05D010548 6.2e-09 64.7 123 38.2
CANSAT56G1720 Cannabis sativa HOM05D008230 ORTHO05D010279 8.1e-09 64.3 145 39.3
FAN03G1067 Fragaria x ananassa HOM05D008230 ORTHO05D010279 8.1e-09 64.3 164 37.2
Gohir.A12G094500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 1.1e-08 63.9 138 39.9
Eucgr.D02490 Eucalyptus grandis HOM05D008230 ORTHO05D010279 1.8e-08 63.2 124 38.7
Sc23g0003760 Simmondsia chinensis HOM05D008230 ORTHO05D010279 4.0e-08 62.0 138 35.5
Nn1g01052 Nelumbo nucifera HOM05D008230 ORTHO05D010279 6.8e-08 61.2 136 36.0
TPR.G39102 Trifolium pratense HOM05D028576 ORTHO05D029774 1.5e-07 60.1 83 48.2
Migut.B01599 Erythranthe guttata HOM05D008230 ORTHO05D010279 2.0e-07 59.7 83 42.2
Medtr0377s0010 Medicago truncatula HOM05D028576 ORTHO05D029774 2.0e-07 59.7 130 39.2
Nn6g34001 Nelumbo nucifera HOM05D008230 ORTHO05D010279 3.4e-07 58.9 163 36.2
Dinv44126 Davidia involucrata HOM05D008230 ORTHO05D010279 5.8e-07 58.2 135 34.8
Lsat_1_v5_gn_7_9081 Lactuca sativa HOM05D008230 ORTHO05D010279 1.7e-06 56.6 157 36.3
Dinv44123 Davidia involucrata HOM05D008230 ORTHO05D010279 2.2e-06 56.2 142 35.9
Rhsim01G0150200 Rhododendron simsii HOM05D008230 ORTHO05D010279 3.8e-06 55.5 140 35.0
SalBow5G3157 Salvia bowleyana HOM05D008230 ORTHO05D010279 3.8e-06 55.5 68 44.1


User provided reference genes

Program Settings