Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G492 Trifolium pratense HOM05D005075 ORTHO05D007097 2.0e-186 655.6 325 100.0
TPR.G22444 Trifolium pratense HOM05D005075 ORTHO05D007097 8.4e-169 597.0 332 91.0
Psat5g094520 Pisum sativum HOM05D005075 ORTHO05D007097 1.2e-167 593.2 324 91.0
Ca_16480_v3 Cicer arietinum L. HOM05D005075 ORTHO05D007097 2.7e-167 592.0 325 90.5
Medtr3g085660 Medicago truncatula HOM05D005075 ORTHO05D007097 3.3e-165 585.1 353 83.6
Glyma.11G248400 Glycine max HOM05D005075 ORTHO05D007097 5.7e-157 557.8 324 83.6
Lj3g0026022 Lotus japonicus HOM05D005075 ORTHO05D007097 6.9e-155 550.8 325 83.4
Phvul.001G259800 Phaseolus vulgaris HOM05D005075 ORTHO05D007097 1.0e-153 547.0 324 80.9
VMungo1383G1024 Vigna mungo HOM05D005075 ORTHO05D007097 3.2e-152 542.0 324 79.9
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea HOM05D005075 ORTHO05D007097 1.2e-146 523.5 322 79.8
Lalb_Chr23g0277981 Lupinus albus HOM05D005075 ORTHO05D007097 1.5e-138 496.5 322 77.3
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea HOM05D005075 ORTHO05D007097 6.1e-135 484.6 322 75.5
TWI18G0401 Tripterygium wilfordii HOM05D005075 ORTHO05D007097 3.2e-128 462.2 325 68.0
CANSAT01G2132 Cannabis sativa HOM05D005075 ORTHO05D007097 6.7e-126 454.5 329 66.3
COL.COLO4_23627 Corchorus olitorius HOM05D005075 ORTHO05D007097 4.4e-125 451.8 325 67.1
Dinv14804 Davidia involucrata HOM05D005075 ORTHO05D007097 7.5e-125 451.1 325 68.0
QL03p054705 Quercus lobata HOM05D005075 ORTHO05D007097 7.5e-125 451.1 325 68.6
GSVIVG01010340001 Vitis vinifera HOM05D005075 ORTHO05D007097 1.3e-124 450.3 328 67.4
Prupe.1G232900 Prunus persica HOM05D005075 ORTHO05D007097 1.8e-123 446.4 325 66.8
Haze_12371 Corylus avellana HOM05D005075 ORTHO05D007097 5.3e-123 444.9 326 67.2
Thecc.02G274600 Theobroma cacao HOM05D005075 ORTHO05D007097 1.2e-122 443.7 325 66.2
Gohir.D02G152200 Gossypium hirsutum HOM05D005075 ORTHO05D007097 1.0e-121 440.7 325 65.8
Gohir.A03G128400 Gossypium hirsutum HOM05D005075 ORTHO05D007097 2.2e-121 439.5 325 65.8
MD13G1113200 Malus domestica HOM05D005075 ORTHO05D007097 2.2e-121 439.5 325 66.2
CSS0028948 Camellia sinensis var. sinensis HOM05D005075 ORTHO05D007097 2.9e-121 439.1 325 67.1
Gorai.005G171200 Gossypium raimondii HOM05D005075 ORTHO05D007097 3.8e-121 438.7 325 65.8
Manes.13G016100 Manihot esculenta HOM05D005075 ORTHO05D007097 4.2e-120 435.3 327 66.4
Potri.008G178400 Populus trichocarpa HOM05D005075 ORTHO05D007097 2.1e-119 433.0 326 65.3
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla HOM05D005075 ORTHO05D007097 2.7e-119 432.6 325 65.2
Duzib251G0605 Durio zibethinus HOM05D005075 ORTHO05D007097 3.6e-119 432.2 325 64.9
FAN07G0914 Fragaria x ananassa HOM05D005075 ORTHO05D007097 6.1e-119 431.4 325 63.1
Aqoxy3G01457 Aquilegia oxysepala HOM05D005075 ORTHO05D007097 1.0e-118 430.6 324 64.8
Rhsim12G0029800 Rhododendron simsii HOM05D005075 ORTHO05D007097 1.4e-118 430.3 325 65.2
FAN12G0151 Fragaria x ananassa HOM05D005075 ORTHO05D007097 4.0e-118 428.7 325 62.5
Cpa.g.sc27.216 Carica papaya HOM05D005075 ORTHO05D007097 1.5e-117 426.8 329 63.5
FvH4_4g24220 Fragaria vesca HOM05D005075 ORTHO05D007097 5.7e-117 424.9 325 61.8
MBI08_g36442_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 5.7e-117 424.9 326 65.6
Sabra08G0136200 Salix brachista HOM05D005075 ORTHO05D007097 9.8e-117 424.1 348 61.2
Ciclev10030830m.g Citrus clementina HOM05D005075 ORTHO05D007097 2.8e-116 422.5 325 63.7
MELO3C018283.2 Cucumis melo HOM05D005075 ORTHO05D007097 4.1e-115 418.7 324 62.7
Eucgr.H04663 Eucalyptus grandis HOM05D005075 ORTHO05D007097 5.4e-115 418.3 327 62.1
Lj3A1065G86 Lonicera japonica HOM05D005075 ORTHO05D007097 1.2e-114 417.2 325 64.9
HanXRQChr08g0233581 Helianthus annuus HOM05D005075 ORTHO05D007097 5.0e-113 411.8 327 63.6
Oeu056679.1 Olea europaea HOM05D005075 ORTHO05D007097 6.5e-113 411.4 325 64.0
ECA233G3670 Erigeron canadensis HOM05D005075 ORTHO05D007097 1.1e-112 410.6 327 63.3
THA.LOC104799053 Tarenaya hassleriana HOM05D005075 ORTHO05D007097 2.5e-112 409.5 325 61.2
PSO782G5362 Papaver somniferum HOM05D005075 ORTHO05D007097 9.4e-112 407.5 324 62.3
Thhalv10006951m.g Eutrema salsugineum HOM05D005075 ORTHO05D007097 1.6e-111 406.8 325 60.6
Nn4g22400 Nelumbo nucifera HOM05D005075 ORTHO05D007097 1.6e-111 406.8 326 63.8
Sed0000829 Sechium edule HOM05D005075 ORTHO05D007097 1.6e-111 406.8 324 60.5
CARHR026760 Cardamine hirsuta HOM05D005075 ORTHO05D007097 2.1e-111 406.4 326 61.0
Cc11_g16630 Coffea canephora HOM05D005075 ORTHO05D007097 2.1e-111 406.4 327 60.2
ClCG06G008480 Citrullus lanatus HOM05D005075 ORTHO05D007097 3.6e-111 405.6 318 62.3
CsaV3_5G015350 Cucumis sativus L. HOM05D005075 ORTHO05D007097 1.0e-110 404.1 324 60.8
AL1G40580 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.4e-110 403.7 326 60.1
SalBow1G5463 Salvia bowleyana HOM05D005075 ORTHO05D007097 1.8e-110 403.3 326 61.0
Peaxi162Scf00804g00120 Petunia axillaris HOM05D005075 ORTHO05D007097 1.2e-109 400.6 321 62.6
SalBow1G4350 Salvia bowleyana HOM05D005075 ORTHO05D007097 1.2e-109 400.6 326 60.7
DCAR_024086 Daucus carota HOM05D005075 ORTHO05D007097 1.5e-109 400.2 328 61.3
PGR119G0347 Punica granatum HOM05D005075 ORTHO05D007097 1.5e-109 400.2 328 60.1
AT1G24340 Arabidopsis thaliana HOM05D005075 ORTHO05D007097 2.6e-109 399.4 326 59.5
BcaC06g35258 Brassica carinata HOM05D005075 ORTHO05D007097 2.6e-109 399.4 326 59.8
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 7.5e-109 397.9 326 58.9
BraA07t28994Z Brassica rapa HOM05D005075 ORTHO05D007097 7.5e-109 397.9 326 59.8
RcHm_v2.0_Chr4g0431061 Rosa chinensis HOM05D005075 ORTHO05D007097 1.3e-108 397.1 325 60.3
A07p12060 Brassica napus HOM05D005075 ORTHO05D007097 2.2e-108 396.4 326 59.8
Carub.0001s2573 Capsella rubella HOM05D005075 ORTHO05D007097 2.8e-108 396.0 326 59.5
BolC7t42310H Brassica oleracea HOM05D005075 ORTHO05D007097 4.9e-108 395.2 326 59.2
Migut.K00700 Erythranthe guttata HOM05D005075 ORTHO05D007097 4.9e-108 395.2 327 59.9
PSO063G5600 Papaver somniferum HOM05D005075 ORTHO05D007097 4.9e-108 395.2 324 61.4
Sp1g23430 Schrenkiella parvula HOM05D005075 ORTHO05D007097 4.9e-108 395.2 326 58.9
C07p18000 Brassica napus HOM05D005075 ORTHO05D007097 8.3e-108 394.4 326 58.9
PGSC0003DMG400022618 Solanum tuberosum HOM05D005075 ORTHO05D007097 1.4e-107 393.7 321 63.2
Carub.0007s3241 Capsella rubella HOM05D005075 ORTHO05D007097 2.7e-106 389.4 326 60.1
Lsat_1_v5_gn_8_149841 Lactuca sativa HOM05D005075 ORTHO05D007097 2.7e-106 389.4 328 59.1
Aa31LG7G9750 Aethionema arabicum HOM05D005075 ORTHO05D007097 7.7e-106 387.9 325 58.2
Nitab4.5_0001802g0060 Nicotiana tabacum HOM05D005075 ORTHO05D007097 3.8e-105 385.6 321 62.3
vmacro01083 Vaccinium macrocarpon HOM05D005075 ORTHO05D007097 3.8e-105 385.6 347 57.6
Sopen05g002750 Solanum pennellii HOM05D005075 ORTHO05D007097 1.1e-104 384.0 321 60.7
Nitab4.5_0002129g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 1.9e-104 383.3 320 62.5
Solyc05g006810.4 Solanum lycopersicum HOM05D005075 ORTHO05D007097 3.3e-104 382.5 321 60.7
CDE02G1220 Ceratophyllum demersum HOM05D005075 ORTHO05D007097 7.3e-104 381.3 325 57.2
Nitab4.5_0000537g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 6.1e-103 378.3 319 61.4
Hund25442 Selenicereus undatus HOM05D005075 ORTHO05D007097 8.0e-103 377.9 331 58.9
unitig_747.g21130 Utricularia gibba HOM05D005075 ORTHO05D007097 8.0e-103 377.9 332 56.0
SHI17941 Sapria himalayana HOM05D005075 ORTHO05D007097 9.8e-101 370.9 334 57.2
SGA_v2.0_scaffold14G07137 Striga asiatica HOM05D005075 ORTHO05D007097 1.5e-96 357.1 327 56.3
Zm00001eb014870 Zea mays HOM05D005075 ORTHO05D007097 4.7e-95 352.1 327 52.9
SEGI_28928 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 3.7e-92 342.4 355 50.1
CiPaw.05G114800 Carya illinoinensis HOM05D005075 ORTHO05D007097 7.0e-91 338.2 272 62.5
ATR0824G188 Amborella trichopoda HOM05D005075 ORTHO05D007097 4.6e-90 335.5 314 55.1
AUR62005575 Chenopodium quinoa HOM05D005075 ORTHO05D007097 4.6e-90 335.5 325 54.5
AUR62024155 Chenopodium quinoa HOM05D005075 ORTHO05D007097 8.6e-89 331.3 343 51.0
Ah.03g133860 Amaranthus hybridus HOM05D005075 ORTHO05D007097 2.3e-86 323.2 333 51.7
EL10Ac6g13442 Beta vulgaris HOM05D005075 ORTHO05D007097 5.2e-86 322.0 325 50.5
CAN.G2246.1 Capsicum annuum HOM05D005075 ORTHO05D007097 3.5e-82 309.3 318 53.5
Peaxi162Scf00634g00011 Petunia axillaris HOM05D005075 ORTHO05D007097 1.6e-74 283.9 321 48.9
Sc11g0000650 Simmondsia chinensis HOM05D005075 ORTHO05D007097 3.0e-73 279.6 187 69.5
AagrBONN_evm.TU.Sc2ySwM_228.4178 Anthoceros agrestis HOM05D005075 ORTHO05D007097 8.6e-73 278.1 334 44.6
HPP92_001258 Vanilla planifolia HOM05D005075 ORTHO05D007097 8.6e-73 278.1 282 52.8
Pp3c26_6380 Physcomitrium patens HOM05D005075 ORTHO05D007097 8.1e-71 271.6 334 42.8
SMO356G0356 Selaginella moellendorffii HOM05D005075 ORTHO05D007097 2.0e-69 266.9 329 42.6
Mapoly0042s0063 Marchantia polymorpha HOM05D005075 ORTHO05D007097 1.4e-67 260.8 315 44.8
Glyma.18G008800 Glycine max HOM05D005075 ORTHO05D007097 1.3e-63 247.7 143 83.9
Cfa009316 Carpinus fangiana HOM05D005075 ORTHO05D007097 5.4e-59 232.3 142 78.9
TAR374G0458 Trochodendron aralioides HOM05D005075 ORTHO05D007097 2.1e-58 230.3 143 77.6
Actinidia30671 Actinidia chinensis HOM05D005075 ORTHO05D007097 5.0e-36 156.0 117 70.1
MD16G1112300 Malus domestica HOM05D005075 ORTHO05D007097 6.1e-34 149.1 103 69.9
Atru.chr12.1465 Acer truncatum HOM05D005075 ORTHO05D007097 3.4e-29 133.3 201 43.3
Atru.chr11.2265 Acer truncatum HOM05D005075 ORTHO05D007097 1.1e-27 128.3 188 39.4
Cre14.g630895 Chlamydomonas reinhardtii HOM05D005075 ORTHO05D007097 2.2e-23 114.0 231 35.9
SEGI_08672 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 2.9e-20 103.6 69 65.2
MCO06G130 Micromonas commoda HOM05D005075 ORTHO05D007097 2.5e-19 100.5 242 31.4
Atru.chr11.2251 Acer truncatum HOM05D005075 ORTHO05D007097 7.9e-18 95.5 70 60.0
HPP92_001243 Vanilla planifolia HOM05D005075 ORTHO05D007097 3.3e-16 90.1 89 49.4
PRCOL_00001291 Prasinoderma coloniale HOM05D005075 ORTHO05D007097 7.0e-14 82.4 249 27.7
Cfa026038 Carpinus fangiana HOM05D005075 ORTHO05D007097 1.2e-08 65.1 320 22.8
MD16G1112100 Malus domestica HOM05D005075 ORTHO05D037935 1.3e-07 61.6 50 64.0
HPP92_001259 Vanilla planifolia HOM05D005075 ORTHO05D007097 4.8e-07 59.7 55 47.3
Sabra10G0048500 Salix brachista HOM05D005075 ORTHO05D007097 1.8e-06 57.8 36 69.4
Atru.chr11.2253 Acer truncatum HOM05D005075 ORTHO05D007097 3.1e-06 57.0 52 48.1


User provided reference genes

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