Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 6.9e-148 527.3 275 100.0
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 1.1e-142 510.0 275 96.7
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 9.1e-140 500.4 249 97.2
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 3.4e-139 498.4 276 95.7
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 1.8e-135 486.1 249 93.6
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 3.9e-135 485.0 275 89.5
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 6.7e-135 484.2 277 90.6
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 1.1e-134 483.4 249 93.2
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 1.3e-133 479.9 249 93.6
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 2.8e-133 478.8 249 93.6
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 8.2e-133 477.2 249 92.8
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 8.2e-133 477.2 249 91.6
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 1.1e-132 476.9 249 91.2
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 1.1e-132 476.9 249 92.4
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 1.8e-132 476.1 247 92.7
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 4.1e-132 474.9 250 92.0
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 5.3e-132 474.6 251 91.6
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 7.0e-132 474.2 249 91.6
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 7.0e-132 474.2 249 91.6
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 7.0e-132 474.2 249 91.6
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 7.0e-132 474.2 249 91.6
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 7.0e-132 474.2 248 92.3
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 9.1e-132 473.8 251 90.0
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 1.5e-131 473.0 250 90.4
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 2.0e-131 472.6 251 90.4
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 2.0e-131 472.6 250 90.8
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 2.0e-131 472.6 248 91.9
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 2.6e-131 472.2 250 91.2
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 3.5e-131 471.9 249 91.2
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 3.5e-131 471.9 247 92.7
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 4.5e-131 471.5 249 92.0
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 4.5e-131 471.5 247 92.7
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 4.5e-131 471.5 251 90.0
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 5.9e-131 471.1 249 90.8
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 5.9e-131 471.1 251 90.4
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 5.9e-131 471.1 249 90.0
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 5.9e-131 471.1 249 90.0
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 7.7e-131 470.7 251 90.4
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 7.7e-131 470.7 247 92.3
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 1.0e-130 470.3 251 89.2
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 1.7e-130 469.5 251 89.6
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 1.7e-130 469.5 249 90.4
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 1.7e-130 469.5 249 90.4
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 2.2e-130 469.2 249 89.6
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 2.9e-130 468.8 251 92.4
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 2.9e-130 468.8 249 90.8
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 2.9e-130 468.8 251 89.2
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 2.9e-130 468.8 250 90.4
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 2.9e-130 468.8 251 90.0
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 3.8e-130 468.4 249 90.4
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 3.8e-130 468.4 250 90.4
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 6.5e-130 467.6 249 90.0
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 8.5e-130 467.2 260 87.7
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 1.1e-129 466.8 250 89.2
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 1.1e-129 466.8 251 88.8
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 1.5e-129 466.5 249 89.2
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 1.9e-129 466.1 251 89.2
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 1.9e-129 466.1 242 92.6
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 1.9e-129 466.1 250 89.6
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 1.9e-129 466.1 251 88.4
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 2.5e-129 465.7 249 90.0
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 4.2e-129 464.9 249 89.6
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 5.5e-129 464.5 249 90.4
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 5.5e-129 464.5 251 88.0
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 7.2e-129 464.2 251 88.0
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 7.2e-129 464.2 251 87.6
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 9.4e-129 463.8 249 89.6
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 9.4e-129 463.8 249 89.6
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 9.4e-129 463.8 247 88.3
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 1.6e-128 463.0 250 88.8
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 2.1e-128 462.6 249 89.6
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 2.1e-128 462.6 247 90.3
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 2.7e-128 462.2 249 90.0
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 2.7e-128 462.2 249 89.6
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 2.7e-128 462.2 249 90.0
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 3.6e-128 461.8 249 88.8
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 6.1e-128 461.1 249 89.6
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 1.0e-127 460.3 244 91.0
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 1.4e-127 459.9 247 89.9
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 1.8e-127 459.5 249 89.2
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 2.3e-127 459.1 249 89.6
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 2.3e-127 459.1 244 91.4
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 5.2e-127 458.0 251 86.5
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 1.1e-126 456.8 250 87.2
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 1.5e-126 456.4 249 88.4
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 2.8e-125 452.2 267 83.1
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 7.0e-124 447.6 249 85.9
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 1.2e-123 446.8 250 84.0
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 3.5e-123 445.3 249 87.1
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 6.5e-122 441.0 248 86.7
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 1.5e-118 429.9 247 83.4
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 1.7e-117 426.4 249 84.3
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 1.1e-116 423.7 222 92.8
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 1.1e-116 423.7 348 65.2
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 4.1e-116 421.8 249 81.1
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 9.1e-116 420.6 249 83.5
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 3.5e-115 418.7 261 80.1
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 1.0e-114 417.2 228 89.0
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 8.5e-114 414.1 242 82.2
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 2.6e-110 402.5 249 76.3
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 4.2e-105 385.2 216 88.0
Haze_05577 Corylus avellana HOM05D005716 ORTHO05D007885 1.6e-96 356.7 191 91.1
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla HOM05D005716 ORTHO05D007885 9.8e-94 347.4 190 89.5
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 4.9e-93 345.1 244 68.4
RcHm_v2.0_Chr5g0013741 Rosa chinensis HOM05D005716 ORTHO05D007885 3.3e-89 332.4 171 94.2
Nitab4.5_0001655g0090 Nicotiana tabacum HOM05D005716 ORTHO05D007885 1.8e-87 326.6 171 91.2
Hund21524 Selenicereus undatus HOM05D005716 ORTHO05D007885 2.9e-85 319.3 181 86.2
PSO017G6742 Papaver somniferum HOM05D005716 ORTHO05D007885 8.3e-85 317.8 168 92.3
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 1.3e-82 310.5 161 92.5
A04p06350 Brassica napus HOM05D005716 ORTHO05D007885 3.6e-80 302.4 182 83.5
PRCOL_00002216 Prasinoderma coloniale HOM05D005716 ORTHO05D007885 1.7e-77 293.5 185 76.8
FAN17G1884 Fragaria x ananassa HOM05D005716 ORTHO05D007885 6.6e-74 281.6 164 85.4
FAN23G0273 Fragaria x ananassa HOM05D005716 ORTHO05D007885 7.3e-73 278.1 164 82.9
FAN25G2810 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.1e-72 276.6 164 84.1
BcaC02g09191 Brassica carinata HOM05D005716 ORTHO05D031863 3.1e-71 272.7 145 92.4
C04p39880 Brassica napus HOM05D005716 ORTHO05D007885 4.9e-69 265.4 147 89.1
BolC4t25559H Brassica oleracea HOM05D005716 ORTHO05D007885 3.2e-68 262.7 155 85.2
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 9.3e-68 261.2 171 77.2
BraA04t16339Z Brassica rapa HOM05D005716 ORTHO05D007885 2.7e-67 259.6 155 84.5
FAN02G1132 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.7e-67 259.6 213 66.2
RcHm_v2.0_Chr5g0013721 Rosa chinensis HOM05D005716 ORTHO05D007885 4.6e-67 258.8 156 82.1
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 5.6e-65 251.9 146 83.6
RcHm_v2.0_Chr5g0013731 Rosa chinensis HOM05D005716 ORTHO05D007885 2.2e-61 240.0 148 81.1
Dinv30725 Davidia involucrata HOM05D005716 ORTHO05D007885 2.9e-53 213.0 141 75.9
Haze_26810 Corylus avellana HOM05D005716 ORTHO05D164461 1.1e-52 211.1 190 55.3
FAN02G0019 Fragaria x ananassa HOM05D005716 ORTHO05D007885 4.6e-51 205.7 151 71.5
AUR62030223 Chenopodium quinoa HOM05D005716 ORTHO05D044022 4.8e-40 169.1 167 56.3
MSTRG.14769 Avicennia marina HOM05D005716 ORTHO05D007885 2.0e-38 163.7 93 84.9
FAN08G0336 Fragaria x ananassa HOM05D005716 ORTHO05D044022 4.8e-32 142.5 76 90.8
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea HOM05D005716 ORTHO05D087704 5.9e-30 135.6 129 58.1
VMungo1309G0118 Vigna mungo HOM05D005716 ORTHO05D437644 2.7e-27 126.7 71 85.9
Dinv30726 Davidia involucrata HOM05D005716 ORTHO05D014961 1.3e-24 117.9 58 89.7
CAN.G94.3 Capsicum annuum HOM05D005716 ORTHO05D115662 8.2e-24 115.2 93 62.4
C05p14270 Brassica napus HOM05D013073 ORTHO05D014961 9.7e-17 91.7 55 76.4
C06p00300 Brassica napus HOM05D013073 ORTHO05D014961 2.8e-16 90.1 55 74.5
A04p26400 Brassica napus HOM05D005716 ORTHO05D099386 7.0e-15 85.5 46 82.6
BcaC08g42818 Brassica carinata HOM05D013073 ORTHO05D014961 2.0e-14 84.0 50 76.0
C09p15390 Brassica napus HOM05D013073 ORTHO05D014961 2.0e-06 57.4 88 40.9


User provided reference genes

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