Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G487 Trifolium pratense HOM05D000353 ORTHO05D000174 1.6e-100 369.4 178 100.0
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 8.5e-30 134.4 173 40.5
Medtr6g445520 Medicago truncatula HOM05D000353 ORTHO05D000174 7.4e-26 121.3 188 37.2
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 3.2e-21 105.9 151 37.7
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.6e-20 103.6 158 34.8
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 7.9e-20 101.3 173 32.9
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.3e-19 99.8 156 35.3
Phvul.007G129300 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.5e-18 97.1 182 31.3
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 4.8e-17 92.0 178 30.9
Phvul.007G143500 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 4.8e-17 92.0 156 33.3
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 6.3e-17 91.7 178 30.9
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.1e-16 89.4 171 30.4
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 3.1e-16 89.4 171 30.4
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.1e-16 89.4 171 30.4
Phvul.L003637 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 3.1e-16 89.4 173 30.6
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-16 88.6 171 29.2
Lj2g0011029 Lotus japonicus HOM05D000353 ORTHO05D000174 6.9e-16 88.2 160 27.5
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 9.1e-16 87.8 171 29.8
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 1.2e-15 87.4 171 29.8
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 2.9e-14 82.8 151 31.1
Phvul.007G155600 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 3.8e-14 82.4 178 31.5
Phvul.001G105000 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.1e-13 80.9 165 30.3
arahy.Tifrunner.gnm1.ann1.HP5C5B Arachis hypogaea HOM05D012160 ORTHO05D009491 3.2e-13 79.3 155 29.0
Medtr4g071730 Medicago truncatula HOM05D007848 ORTHO05D000174 5.5e-13 78.6 140 32.9
Lj1g0016702 Lotus japonicus HOM05D007499 ORTHO05D000174 7.2e-13 78.2 178 25.3
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 9.4e-13 77.8 187 26.7
Medtr1g094230 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-12 77.4 156 30.8
Phvul.008G122133 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 1.2e-12 77.4 140 35.0
Medtr6g039240 Medicago truncatula HOM05D007848 ORTHO05D000174 1.6e-12 77.0 156 31.4
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 1.6e-12 77.0 178 23.6
Medtr8g463820 Medicago truncatula HOM05D007848 ORTHO05D000174 2.1e-12 76.6 140 32.9
Lj4g0014650 Lotus japonicus HOM05D020041 ORTHO05D030020 4.7e-12 75.5 141 31.2
Medtr1g085690 Medicago truncatula HOM05D007848 ORTHO05D000174 6.1e-12 75.1 129 34.1
Glyma.05G083400 Glycine max HOM05D000353 ORTHO05D000174 2.3e-11 73.2 154 28.6
Lj4g0000768 Lotus japonicus HOM05D007499 ORTHO05D000174 6.7e-11 71.6 180 26.1
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 6.7e-11 71.6 184 21.7
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 6.7e-11 71.6 148 29.1
Lj6g0015228 Lotus japonicus HOM05D007499 ORTHO05D000174 8.8e-11 71.2 151 27.2
Lj3g0016345 Lotus japonicus HOM05D000353 ORTHO05D000174 1.1e-10 70.9 94 34.0
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 1.1e-10 70.9 165 23.6
LjContig00155g0001945 Lotus japonicus HOM05D000353 ORTHO05D000174 9.7e-10 67.8 142 28.2
Lj6g0022193 Lotus japonicus HOM05D010643 ORTHO05D013332 1.3e-09 67.4 143 27.3
Lj2g0010324 Lotus japonicus HOM05D031116 ORTHO05D009491 3.7e-09 65.9 120 30.0
TPR.G39726 Trifolium pratense HOM05D007499 ORTHO05D009491 3.7e-09 65.9 140 28.6
TPR.G34060 Trifolium pratense HOM05D011527 ORTHO05D009491 4.8e-09 65.5 135 26.7
Medtr6g013455 Medicago truncatula HOM05D007848 ORTHO05D000174 6.3e-09 65.1 109 33.9
TPR.G1533 Trifolium pratense HOM05D007848 ORTHO05D000174 1.1e-08 64.3 112 33.0
TPR.G27579 Trifolium pratense HOM05D007499 ORTHO05D009491 1.4e-08 63.9 148 26.4
TPR.G30682 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-08 63.9 114 31.6
arahy.Tifrunner.gnm1.ann1.5G8KYG Arachis hypogaea HOM05D000353 ORTHO05D000174 1.8e-08 63.5 175 23.4
Lj3g0003592 Lotus japonicus HOM05D000353 ORTHO05D000174 1.8e-08 63.5 90 32.2
arahy.Tifrunner.gnm1.ann1.A8IEE6 Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-08 62.0 175 23.4
arahy.Tifrunner.gnm1.ann1.GIN4EI Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-08 62.0 175 23.4
arahy.Tifrunner.gnm1.ann1.RS3EFR Arachis hypogaea HOM05D000353 ORTHO05D000174 5.3e-08 62.0 175 23.4
Medtr1g075850 Medicago truncatula HOM05D000353 ORTHO05D000174 9.1e-08 61.2 174 21.3
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 1.2e-07 60.8 91 30.8
arahy.Tifrunner.gnm1.ann1.HXT0UR Arachis hypogaea HOM05D000353 ORTHO05D000174 1.6e-07 60.5 175 23.4
Medtr2g054710 Medicago truncatula HOM05D000353 ORTHO05D000174 1.6e-07 60.5 106 27.4
arahy.Tifrunner.gnm1.ann1.BHF996 Arachis hypogaea HOM05D000353 ORTHO05D000174 2.6e-07 59.7 175 24.0
TPR.G30051 Trifolium pratense HOM05D000023 ORTHO05D009491 3.5e-07 59.3 146 24.0
Medtr4g046077 Medicago truncatula HOM05D007499 ORTHO05D000174 1.7e-06 57.0 178 25.3
TPR.G7354 Trifolium pratense HOM05D000353 ORTHO05D000174 2.2e-06 56.6 74 36.5
arahy.Tifrunner.gnm1.ann1.C28E5T Arachis hypogaea HOM05D010000 ORTHO05D009491 8.5e-06 54.7 115 27.8


User provided reference genes

Program Settings