Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4797 Trifolium pratense HOM05D006641 ORTHO05D007573 4.0e-84 314.7 156 100.0
Medtr7g109410 Medicago truncatula HOM05D006641 ORTHO05D007573 3.8e-66 255.0 153 84.3
Psat3g020560 Pisum sativum HOM05D006641 ORTHO05D007573 6.2e-61 237.7 153 79.1
Lj1g0024392 Lotus japonicus HOM05D006641 ORTHO05D007573 4.0e-44 181.8 150 67.3
Phvul.001G212200 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 3.0e-39 165.6 153 58.2
VMungo1383G0778 Vigna mungo HOM05D006641 ORTHO05D007573 1.5e-38 163.3 152 57.9
Glyma.19G215600 Glycine max HOM05D006641 ORTHO05D007573 1.6e-37 159.8 160 58.1
Glyma.03G218800 Glycine max HOM05D006641 ORTHO05D007573 6.3e-37 157.9 156 55.8
Lj5g0026629 Lotus japonicus HOM05D006641 ORTHO05D007573 1.1e-36 157.1 149 57.0
Phvul.007G214900 Phaseolus vulgaris HOM05D006641 ORTHO05D007573 4.5e-35 151.8 144 55.6
Medtr1g087230 Medicago truncatula HOM05D006641 ORTHO05D007573 7.7e-35 151.0 146 56.2
VMungo0007G0001 Vigna mungo HOM05D006641 ORTHO05D007573 7.7e-35 151.0 142 57.0
Lalb_Chr15g0078301 Lupinus albus HOM05D006641 ORTHO05D007573 2.5e-33 146.0 144 57.6
Lalb_Chr02g0146781 Lupinus albus HOM05D006641 ORTHO05D007573 1.6e-32 143.3 142 55.6
Psat6g162160 Pisum sativum HOM05D006641 ORTHO05D007573 8.8e-31 137.5 147 51.0
Ca_10290_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.1e-30 137.1 155 51.6
Ca_30054_v3 Cicer arietinum L. HOM05D006641 ORTHO05D007573 1.1e-30 137.1 155 51.6
TPR.G19761 Trifolium pratense HOM05D006641 ORTHO05D007573 2.5e-30 136.0 149 51.7
Glyma.10G013800 Glycine max HOM05D006641 ORTHO05D007573 3.3e-30 135.6 151 50.3
QL12p020167 Quercus lobata HOM05D006641 ORTHO05D007573 1.3e-29 133.7 146 55.5
Glyma.02G013200 Glycine max HOM05D006641 ORTHO05D007573 4.1e-28 128.6 144 47.9
arahy.Tifrunner.gnm1.ann1.DB9XMS Arachis hypogaea HOM05D006641 ORTHO05D007573 1.5e-27 126.7 146 50.0
Duzib138G1609 Durio zibethinus HOM05D006641 ORTHO05D007573 3.4e-27 125.6 147 50.3
Duzib211G0496 Durio zibethinus HOM05D006641 ORTHO05D007573 3.4e-27 125.6 148 49.3
Atru.chr5.1033 Acer truncatum HOM05D006641 ORTHO05D007573 3.2e-25 119.0 156 46.2
Manes.05G002600 Manihot esculenta HOM05D006641 ORTHO05D007573 4.2e-25 118.6 138 50.7
Manes.01G226800 Manihot esculenta HOM05D006641 ORTHO05D007573 5.5e-25 118.2 139 51.8
Oeu008464.1 Olea europaea HOM05D006641 ORTHO05D007573 1.6e-24 116.7 146 46.6
Cfa005814 Carpinus fangiana HOM05D006641 ORTHO05D007573 2.1e-24 116.3 148 47.3
Thecc.01G311800 Theobroma cacao HOM05D006641 ORTHO05D007573 2.1e-24 116.3 148 49.3
CsaV3_7G029900 Cucumis sativus L. HOM05D006641 ORTHO05D007573 6.1e-24 114.8 152 46.1
MELO3C015931.2 Cucumis melo HOM05D006641 ORTHO05D007573 7.9e-24 114.4 152 48.0
Duzib133G1491 Durio zibethinus HOM05D006641 ORTHO05D007573 7.9e-24 114.4 147 44.9
Sed0015554 Sechium edule HOM05D006641 ORTHO05D007573 1.8e-23 113.2 150 45.3
Hma1.2p1_0212F.1_g090010 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 3.9e-23 112.1 142 44.4
TWI36G0114 Tripterygium wilfordii HOM05D006641 ORTHO05D007573 3.9e-23 112.1 145 44.8
ClCG09G005170 Citrullus lanatus HOM05D006641 ORTHO05D007573 5.1e-23 111.7 148 45.9
Hma1.2p1_0486F.1_g163110 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 8.8e-23 110.9 148 48.0
Hma1.2p1_0486F.1_g163121 Hydrangea macrophylla HOM05D006641 ORTHO05D007573 8.8e-23 110.9 148 48.0
Gohir.A07G127900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.5e-22 110.2 149 47.0
Gorai.001G143700 Gossypium raimondii HOM05D006641 ORTHO05D007573 2.6e-22 109.4 149 47.0
Gohir.D07G132300 Gossypium hirsutum HOM05D006641 ORTHO05D007573 4.4e-22 108.6 149 47.0
Aqoxy2G01829 Aquilegia oxysepala HOM05D006641 ORTHO05D007573 5.7e-22 108.2 140 48.6
Sabra02G0160400 Salix brachista HOM05D006641 ORTHO05D007573 1.3e-21 107.1 141 46.8
Potri.002G196900 Populus trichocarpa HOM05D006641 ORTHO05D007573 2.2e-21 106.3 151 45.0
CSS0030498 Camellia sinensis var. sinensis HOM05D006641 ORTHO05D007573 2.8e-21 105.9 144 44.4
COL.COLO4_23247 Corchorus olitorius HOM05D006641 ORTHO05D007573 3.7e-21 105.5 149 46.3
TAR589G0002 Trochodendron aralioides HOM05D006641 ORTHO05D007573 6.3e-21 104.8 144 45.8
TAR633G2793 Trochodendron aralioides HOM05D006641 ORTHO05D007573 6.3e-21 104.8 144 45.8
Potri.014G122100 Populus trichocarpa HOM05D006641 ORTHO05D007573 8.2e-21 104.4 153 45.1
CiPaw.07G116300 Carya illinoinensis HOM05D006641 ORTHO05D007573 1.8e-20 103.2 154 44.2
vmacro02409 Vaccinium macrocarpon HOM05D006641 ORTHO05D007573 3.1e-20 102.4 154 45.5
PSO210G6531 Papaver somniferum HOM05D006641 ORTHO05D007573 4.1e-20 102.1 147 41.5
Nitab4.5_0001301g0080 Nicotiana tabacum HOM05D006641 ORTHO05D007573 9.1e-20 100.9 153 39.9
Prupe.8G270900 Prunus persica HOM05D006641 ORTHO05D007573 1.2e-19 100.5 146 42.5
Gohir.D08G139900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 1.5e-19 100.1 152 43.4
Gorai.004G144000 Gossypium raimondii HOM05D006641 ORTHO05D007573 1.5e-19 100.1 152 43.4
Gohir.A08G119133 Gossypium hirsutum HOM05D006641 ORTHO05D007573 2.0e-19 99.8 152 42.1
Nn3g21666 Nelumbo nucifera HOM05D006641 ORTHO05D007573 2.0e-19 99.8 140 45.7
Gohir.D12G129400 Gossypium hirsutum HOM05D006641 ORTHO05D007573 2.6e-19 99.4 138 43.5
PSO761G0656 Papaver somniferum HOM05D006641 ORTHO05D007573 2.6e-19 99.4 147 41.5
CiPaw.08G090800 Carya illinoinensis HOM05D006641 ORTHO05D007573 4.5e-19 98.6 152 40.1
Rhsim13G0005400 Rhododendron simsii HOM05D006641 ORTHO05D007573 4.5e-19 98.6 157 42.0
Eucgr.H01054 Eucalyptus grandis HOM05D006641 ORTHO05D007573 5.9e-19 98.2 145 42.1
Sabra14G0090500 Salix brachista HOM05D006641 ORTHO05D007573 5.9e-19 98.2 146 43.2
Gorai.008G140500 Gossypium raimondii HOM05D006641 ORTHO05D007573 7.7e-19 97.8 138 42.8
Ciclev10021856m.g Citrus clementina HOM05D006641 ORTHO05D007573 1.0e-18 97.4 139 44.6
PGSC0003DMG400009037 Solanum tuberosum HOM05D006641 ORTHO05D007573 1.0e-18 97.4 150 40.7
Cpa.g.sc18.26 Carica papaya HOM05D006641 ORTHO05D007573 1.7e-18 96.7 156 41.0
Sopen01g031320 Solanum pennellii HOM05D006641 ORTHO05D007573 2.2e-18 96.3 149 38.9
SalBow3G3599 Salvia bowleyana HOM05D006641 ORTHO05D007573 2.9e-18 95.9 151 41.1
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 3.8e-18 95.5 139 43.9
Solyc01g079550.2 Solanum lycopersicum HOM05D006641 ORTHO05D007573 3.8e-18 95.5 149 38.9
FAN13G0974 Fragaria x ananassa HOM05D001136 ORTHO05D007573 6.5e-18 94.7 148 45.3
TAR362G0542 Trochodendron aralioides HOM05D006641 ORTHO05D007573 6.5e-18 94.7 139 44.6
FAN08G0230 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.4e-17 93.6 150 43.3
FAN08G2922 Fragaria x ananassa HOM05D006641 ORTHO05D007573 1.4e-17 93.6 150 43.3
FAN18G1732 Fragaria x ananassa HOM05D001136 ORTHO05D007573 1.4e-17 93.6 150 43.3
MD03G1296400 Malus domestica HOM05D006641 ORTHO05D007573 1.9e-17 93.2 152 42.8
FvH4_5g39350 Fragaria vesca HOM05D006641 ORTHO05D007573 2.5e-17 92.8 148 44.6
FAN04G2480 Fragaria x ananassa HOM05D001136 ORTHO05D007573 3.2e-17 92.4 148 43.9
Nitab4.5_0008979g0010 Nicotiana tabacum HOM05D006641 ORTHO05D007573 4.2e-17 92.0 147 40.8
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 5.5e-17 91.7 139 41.7
RcHm_v2.0_Chr7g0241631 Rosa chinensis HOM05D006641 ORTHO05D007573 5.5e-17 91.7 153 42.5
Ah.11g049320 Amaranthus hybridus HOM05D000446 ORTHO05D000321 7.2e-17 91.3 142 39.4
Migut.D00088 Erythranthe guttata HOM05D006641 ORTHO05D007573 7.2e-17 91.3 157 38.2
MD11G1315800 Malus domestica HOM05D006641 ORTHO05D007573 9.4e-17 90.9 150 42.7
EL10As5g23515 Beta vulgaris HOM05D006641 ORTHO05D007573 1.2e-16 90.5 155 40.0
AUR62024668 Chenopodium quinoa HOM05D006641 ORTHO05D007573 1.2e-16 90.5 162 40.7
PGR119G1902 Punica granatum HOM05D006641 ORTHO05D007573 1.2e-16 90.5 161 35.4
Haze_05028 Corylus avellana HOM05D006641 ORTHO05D007573 2.7e-16 89.4 128 46.9
Gohir.A12G125900 Gossypium hirsutum HOM05D006641 ORTHO05D007573 4.7e-16 88.6 147 40.8
ECA247G2557 Erigeron canadensis HOM05D006641 ORTHO05D007573 8.0e-16 87.8 147 43.5
SGA_v2.0_scaffold376G50279 Striga asiatica HOM05D006641 ORTHO05D007573 1.0e-15 87.4 139 38.8
ATR0706G193 Amborella trichopoda HOM05D006641 ORTHO05D007573 1.8e-15 86.7 148 38.5
DCAR_002902 Daucus carota HOM05D006641 ORTHO05D007573 1.8e-15 86.7 141 35.5
CANSAT25G1473 Cannabis sativa HOM05D006641 ORTHO05D007573 2.3e-15 86.3 157 39.5
AUR62011824 Chenopodium quinoa HOM05D006641 ORTHO05D007573 3.9e-15 85.5 150 41.3
Peaxi162Scf00691g00003 Petunia axillaris HOM05D006641 ORTHO05D007573 5.2e-15 85.1 148 36.5
HanXRQChr15g0465011 Helianthus annuus HOM05D006641 ORTHO05D007573 8.8e-15 84.3 138 41.3
Dinv33109 Davidia involucrata HOM05D006641 ORTHO05D007573 1.1e-14 84.0 136 43.4
DCAR_005769 Daucus carota HOM05D006641 ORTHO05D007573 2.6e-14 82.8 143 35.7
arahy.Tifrunner.gnm1.ann1.Q9I7GX Arachis hypogaea HOM05D006641 ORTHO05D007573 4.4e-14 82.0 113 40.7
Cc01_g21330 Coffea canephora HOM05D006641 ORTHO05D007573 1.3e-13 80.5 173 38.2
Lsat_1_v5_gn_9_2880 Lactuca sativa HOM05D006641 ORTHO05D007573 4.8e-13 78.6 153 37.9
Actinidia27614 Actinidia chinensis HOM05D006641 ORTHO05D007573 1.1e-12 77.4 136 41.2
CARHR249590 Cardamine hirsuta HOM05D006641 ORTHO05D007573 3.5e-11 72.4 133 38.3
THA.LOC104801302 Tarenaya hassleriana HOM05D006641 ORTHO05D007573 3.5e-11 72.4 138 37.7
AL6G51140 Arabidopsis lyrata HOM05D006641 ORTHO05D007573 5.9e-11 71.6 160 34.4
Aa31LG5G1730 Aethionema arabicum HOM05D006641 ORTHO05D007573 5.0e-10 68.6 156 35.3
AT4G02090 Arabidopsis thaliana HOM05D006641 ORTHO05D007573 6.5e-10 68.2 150 36.0
Carub.0006s3513 Capsella rubella HOM05D006641 ORTHO05D007573 1.1e-09 67.4 156 33.3
Sp6g01980 Schrenkiella parvula HOM05D006641 ORTHO05D007573 1.1e-09 67.4 143 36.4
BraA09t35814Z Brassica rapa HOM05D001136 ORTHO05D007573 1.5e-09 67.0 142 34.5
BcaB01g02078 Brassica carinata HOM05D006641 ORTHO05D007573 1.9e-09 66.6 143 32.9
BcaC04g24036 Brassica carinata HOM05D001136 ORTHO05D007573 4.2e-09 65.5 143 33.6
A09p01550 Brassica napus HOM05D006641 ORTHO05D007573 4.2e-09 65.5 143 33.6
BolC9t53098H Brassica oleracea HOM05D001136 ORTHO05D007573 4.2e-09 65.5 143 33.6
C09p01650 Brassica napus HOM05D001136 ORTHO05D007573 1.6e-08 63.5 143 32.9
Thhalv10029320m.g Eutrema salsugineum HOM05D006641 ORTHO05D007573 1.0e-07 60.8 142 33.8
PSO357G0224 Papaver somniferum HOM05D006641 ORTHO05D007573 3.0e-07 59.3 159 33.3
PSO170G1046 Papaver somniferum HOM05D006641 ORTHO05D007573 4.0e-07 58.9 159 33.3
Eucgr.K03540 Eucalyptus grandis HOM05D006641 ORTHO05D007573 1.2e-06 57.4 145 33.1


User provided reference genes

Program Settings