Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 4.1e-156 554.7 281 100.0
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 2.4e-127 459.1 281 85.1
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 5.3e-119 431.4 281 80.4
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 1.5e-118 429.9 282 81.9
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 2.5e-116 422.5 281 79.7
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 4.5e-110 401.7 281 75.1
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 1.4e-108 396.7 281 72.2
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 1.0e-106 390.6 281 72.2
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 2.8e-104 382.5 286 69.6
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 8.2e-104 380.9 281 71.5
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 8.2e-104 380.9 286 69.2
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 1.8e-103 379.8 281 70.1
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 1.8e-103 379.8 283 70.7
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 1.8e-103 379.8 286 69.9
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 1.0e-101 374.0 282 69.9
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 1.0e-101 374.0 281 70.5
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 2.2e-101 372.9 281 70.8
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 1.1e-100 370.5 282 69.5
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 1.4e-100 370.2 283 67.8
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.9e-100 369.8 282 69.9
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 3.2e-100 369.0 285 68.1
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 4.2e-100 368.6 281 69.0
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 4.2e-100 368.6 284 70.1
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 5.5e-100 368.2 281 69.4
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 5.5e-100 368.2 281 68.3
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 9.4e-100 367.5 285 67.4
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 1.2e-99 367.1 287 67.2
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 1.2e-99 367.1 284 68.3
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 1.6e-99 366.7 281 67.6
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 2.7e-99 365.9 281 67.3
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 4.6e-99 365.2 282 68.1
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 6.1e-99 364.8 281 68.0
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 7.9e-99 364.4 288 66.7
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 1.8e-98 363.2 281 66.2
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 2.3e-98 362.8 268 68.7
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 2.3e-98 362.8 286 66.4
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.0e-98 362.5 287 66.9
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 3.9e-98 362.1 282 68.8
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.9e-98 362.1 286 67.8
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 3.9e-98 362.1 303 64.0
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 6.7e-98 361.3 286 68.2
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 6.7e-98 361.3 281 65.8
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 8.8e-98 360.9 281 67.3
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.1e-97 360.5 281 65.8
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 1.1e-97 360.5 286 68.5
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 1.5e-97 360.1 281 66.2
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.5e-97 360.1 283 66.4
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 4.4e-97 358.6 289 66.8
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 5.7e-97 358.2 309 63.4
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 7.4e-97 357.8 282 68.4
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.3e-96 357.1 281 66.9
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 1.7e-96 356.7 281 67.3
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 2.2e-96 356.3 281 66.5
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 3.7e-96 355.5 281 64.8
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 6.3e-96 354.8 282 66.3
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 1.8e-95 353.2 287 66.2
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 1.8e-95 353.2 287 66.2
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 1.8e-95 353.2 281 65.8
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 3.1e-95 352.4 227 76.7
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 3.1e-95 352.4 227 76.7
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 5.3e-95 351.7 287 63.4
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 6.9e-95 351.3 276 67.4
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 9.1e-95 350.9 272 69.1
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 2.6e-94 349.4 226 75.7
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 3.4e-94 349.0 282 64.9
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 3.4e-94 349.0 226 76.1
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 1.0e-93 347.4 220 77.3
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 1.3e-93 347.1 226 75.2
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 6.5e-93 344.7 283 65.0
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 1.1e-92 344.0 281 66.9
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 5.5e-92 341.7 283 62.2
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 1.2e-91 340.5 283 63.6
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 1.2e-91 340.5 231 74.0
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.7e-91 339.3 263 65.4
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 3.6e-91 339.0 204 79.4
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 3.6e-91 339.0 281 63.3
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 7.9e-91 337.8 282 66.7
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.0e-90 337.4 283 64.3
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 1.0e-90 337.4 281 63.7
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 1.4e-90 337.0 203 79.3
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.3e-90 336.3 225 73.3
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.0e-90 335.9 222 73.4
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 8.8e-90 334.3 203 79.8
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 1.5e-89 333.6 203 77.3
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 4.4e-89 332.0 205 79.0
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 2.8e-88 329.3 238 71.0
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 2.8e-88 329.3 308 60.1
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 1.1e-87 327.4 203 76.8
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 3.1e-87 325.9 282 60.3
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 1.2e-86 323.9 284 61.6
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 1.2e-86 323.9 214 75.2
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 2.5e-84 316.2 275 62.2
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 7.2e-84 314.7 233 70.0
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 9.4e-84 314.3 241 65.6
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 4.7e-83 312.0 218 70.2
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 4.1e-79 298.9 289 55.7
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.6e-78 297.0 222 67.1
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 1.6e-78 297.0 215 69.8
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 1.0e-77 294.3 284 59.2
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 1.2e-75 287.3 178 78.1
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.2e-75 287.3 235 63.4
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 6.1e-75 285.0 201 69.7
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 6.3e-72 275.0 283 56.9
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 2.5e-68 263.1 223 60.1
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.5e-68 261.9 284 55.6
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 8.9e-66 254.6 290 50.7
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 1.5e-65 253.8 200 63.0
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 3.4e-65 252.7 162 75.3
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 6.3e-64 248.4 242 58.7
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 5.4e-63 245.4 157 74.5
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 9.2e-63 244.6 157 77.7
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 5.0e-61 238.8 214 58.9
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 2.2e-56 223.4 220 52.7
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 5.4e-55 218.8 264 47.0
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 1.3e-53 214.2 202 53.5
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 3.0e-53 213.0 117 87.2
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 1.9e-44 183.7 107 80.4
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 5.2e-42 175.6 182 57.7
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 5.8e-41 172.2 187 51.9
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 9.0e-26 121.7 74 73.0
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.6e-25 118.6 113 56.6
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 2.6e-09 67.0 63 55.6
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 1.4e-07 61.2 34 79.4


User provided reference genes

Program Settings