Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4741 Trifolium pratense HOM05D000110 ORTHO05D410699 1.1e-84 316.6 159 100.0
Ca_09522_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 6.6e-18 94.7 158 46.8
Glyma.16G022900 Glycine max HOM05D000110 ORTHO05D000024 2.8e-16 89.4 196 39.3
Phvul.010G115600 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 1.5e-14 83.6 211 36.5
Psat0s5999g0040 Pisum sativum HOM05D000110 ORTHO05D000024 2.0e-14 83.2 107 48.6
Lj1g0004249 Lotus japonicus HOM05D000110 ORTHO05D000024 9.9e-14 80.9 159 40.3
Glyma.07G053900 Glycine max HOM05D000110 ORTHO05D000024 2.9e-13 79.3 211 34.6
TPR.G15915 Trifolium pratense HOM05D000110 ORTHO05D000024 2.9e-13 79.3 180 36.1
VMungo0540G2411 Vigna mungo HOM05D000110 ORTHO05D000024 4.9e-13 78.6 178 37.6
Lj1g0003978 Lotus japonicus HOM05D000110 ORTHO05D000024 6.4e-13 78.2 180 36.7
Medtr8g027295 Medicago truncatula HOM05D000110 ORTHO05D000024 8.4e-13 77.8 192 36.5
VMungo0331G1490 Vigna mungo HOM05D000110 ORTHO05D000024 1.4e-12 77.0 210 34.3
Glyma.19G257500 Glycine max HOM05D000110 ORTHO05D000024 2.4e-12 76.3 192 37.5
Phvul.006G114900 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 2.4e-12 76.3 177 38.4
Ca_23513_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 5.4e-12 75.1 121 40.5
Ca_30405_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 5.4e-12 75.1 121 40.5
Glyma.03G258800 Glycine max HOM05D000110 ORTHO05D000024 5.4e-12 75.1 138 42.0
Cfa003777 Carpinus fangiana HOM05D000110 ORTHO05D000024 6.6e-10 68.2 103 41.7
Haze_15683 Corylus avellana HOM05D000110 ORTHO05D000024 1.5e-09 67.0 103 40.8
Medtr3g091820 Medicago truncatula HOM05D000110 ORTHO05D000024 7.3e-09 64.7 161 34.2
Lalb_Chr17g0342791 Lupinus albus HOM05D000110 ORTHO05D000024 1.3e-08 63.9 197 36.5
Thecc.01G339100 Theobroma cacao HOM05D000110 ORTHO05D000024 1.3e-08 63.9 164 32.3
CiPaw.01G078400 Carya illinoinensis HOM05D000110 ORTHO05D000024 2.1e-08 63.2 122 39.3
Duzib068G0928 Durio zibethinus HOM05D000110 ORTHO05D000024 2.8e-08 62.8 93 44.1
Nn3g18919 Nelumbo nucifera HOM05D000110 ORTHO05D000024 2.8e-08 62.8 103 37.9
QL08p045966 Quercus lobata HOM05D000110 ORTHO05D000024 3.6e-08 62.4 115 37.4
Gohir.A09G188900 Gossypium hirsutum HOM05D000110 ORTHO05D000024 4.8e-08 62.0 93 41.9
Lalb_Chr04g0254351 Lupinus albus HOM05D000110 ORTHO05D000024 4.8e-08 62.0 167 36.5
Eucgr.E00037 Eucalyptus grandis HOM05D000110 ORTHO05D000024 6.2e-08 61.6 130 39.2
Gohir.D08G114000 Gossypium hirsutum HOM05D000110 ORTHO05D000024 6.2e-08 61.6 148 35.8
Gorai.003G076400 Gossypium raimondii HOM05D000110 ORTHO05D000024 6.2e-08 61.6 76 48.7
Manes.06G105100 Manihot esculenta HOM05D000110 ORTHO05D000024 8.1e-08 61.2 119 37.0
Lalb_Chr18g0044521 Lupinus albus HOM05D000110 ORTHO05D000024 1.1e-07 60.8 169 34.9
CiPaw.12G079500 Carya illinoinensis HOM05D000110 ORTHO05D000024 1.4e-07 60.5 108 38.0
Sabra02G0139100 Salix brachista HOM05D000110 ORTHO05D000024 1.8e-07 60.1 81 46.9
Gorai.006G206100 Gossypium raimondii HOM05D000110 ORTHO05D000024 2.4e-07 59.7 107 36.4
HanXRQChr04g0120451 Helianthus annuus HOM05D000110 ORTHO05D000024 2.4e-07 59.7 109 36.7
Manes.14G065600 Manihot esculenta HOM05D000110 ORTHO05D000024 2.4e-07 59.7 85 43.5
Duzib068G0524 Durio zibethinus HOM05D000110 ORTHO05D000024 3.1e-07 59.3 120 36.7
Thecc.03G013000 Theobroma cacao HOM05D000110 ORTHO05D000024 3.1e-07 59.3 82 45.1
VMungo1309G1990 Vigna mungo HOM05D000110 ORTHO05D000024 3.1e-07 59.3 127 34.6
MSTRG.17358 Avicennia marina HOM05D000110 ORTHO05D000024 4.0e-07 58.9 183 28.4
Duzib138G1651 Durio zibethinus HOM05D000110 ORTHO05D000024 4.0e-07 58.9 125 36.8
Gohir.A09G171600 Gossypium hirsutum HOM05D000110 ORTHO05D000024 4.0e-07 58.9 80 43.8
Gohir.D09G167100 Gossypium hirsutum HOM05D000110 ORTHO05D000024 4.0e-07 58.9 80 43.8
Gorai.006G188900 Gossypium raimondii HOM05D000110 ORTHO05D000024 4.0e-07 58.9 80 43.8
Nn3g16849 Nelumbo nucifera HOM05D000110 ORTHO05D000024 4.0e-07 58.9 119 34.5
Cc02_g39630 Coffea canephora HOM05D000110 ORTHO05D000024 5.3e-07 58.5 102 37.3
Duzib068G0851 Durio zibethinus HOM05D000110 ORTHO05D000024 5.3e-07 58.5 96 38.5
TAR629G3403 Trochodendron aralioides HOM05D000110 ORTHO05D000024 5.3e-07 58.5 99 40.4
arahy.Tifrunner.gnm1.ann1.NQ5KT7 Arachis hypogaea HOM05D000110 ORTHO05D000024 6.9e-07 58.2 123 34.1
CSS0033384 Camellia sinensis var. sinensis HOM05D000110 ORTHO05D000024 6.9e-07 58.2 87 43.7
COL.COLO4_10766 Corchorus olitorius HOM05D000110 ORTHO05D000024 6.9e-07 58.2 74 47.3
Ah.12g053010 Amaranthus hybridus HOM05D000110 ORTHO05D000024 9.0e-07 57.8 80 45.0
CiPaw.02G042000 Carya illinoinensis HOM05D000110 ORTHO05D000024 9.0e-07 57.8 145 36.6
Haze_07502 Corylus avellana HOM05D000110 ORTHO05D000024 9.0e-07 57.8 83 44.6
DCAR_006497 Daucus carota HOM05D000110 ORTHO05D000024 9.0e-07 57.8 92 38.0
Glyma.04G233300 Glycine max HOM05D000110 ORTHO05D000024 9.0e-07 57.8 105 34.3
Phvul.001G062100 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 9.0e-07 57.8 110 34.5
TAR374G1174 Trochodendron aralioides HOM05D000110 ORTHO05D000024 9.0e-07 57.8 98 35.7
Actinidia19323 Actinidia chinensis HOM05D001156 ORTHO05D000024 1.2e-06 57.4 85 43.5
Ciclev10021278m.g Citrus clementina HOM05D000110 ORTHO05D000024 1.2e-06 57.4 81 44.4
Glyma.06G131500 Glycine max HOM05D000110 ORTHO05D000024 1.2e-06 57.4 102 36.3
Phvul.009G047500 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 1.2e-06 57.4 126 33.3
TAR375G0474 Trochodendron aralioides HOM05D000110 ORTHO05D000024 1.2e-06 57.4 129 32.6
Actinidia33070 Actinidia chinensis HOM05D000110 ORTHO05D000024 1.5e-06 57.0 86 44.2
Ca_25220_v3 Cicer arietinum L. HOM05D000110 ORTHO05D000024 1.5e-06 57.0 95 41.1
Hma1.2p1_0415F.1_g147990 Hydrangea macrophylla HOM05D000110 ORTHO05D000024 1.5e-06 57.0 106 36.8
Lj3g0007699 Lotus japonicus HOM05D000110 ORTHO05D000024 1.5e-06 57.0 207 30.0
Potri.014G100900 Populus trichocarpa HOM05D000110 ORTHO05D000024 1.5e-06 57.0 136 38.2
Sabra01G0062600 Salix brachista HOM05D000110 ORTHO05D000024 1.5e-06 57.0 112 36.6
TPR.G8875 Trifolium pratense HOM05D000110 ORTHO05D000024 1.5e-06 57.0 108 38.0
Duzib205G0691 Durio zibethinus HOM05D000110 ORTHO05D000024 2.0e-06 56.6 94 41.5
Oeu004964.1 Olea europaea HOM05D000110 ORTHO05D000024 2.0e-06 56.6 137 33.6
Prupe.5G173100 Prunus persica HOM05D000110 ORTHO05D000024 2.0e-06 56.6 130 36.9
Sc10g0010050 Simmondsia chinensis HOM05D000110 ORTHO05D000024 2.0e-06 56.6 87 42.5
TAR622G0496 Trochodendron aralioides HOM05D000110 ORTHO05D000024 2.0e-06 56.6 81 42.0
MSTRG.20913 Avicennia marina HOM05D000110 ORTHO05D000024 2.6e-06 56.2 64 46.9
Duzib205G0450 Durio zibethinus HOM05D000110 ORTHO05D000024 2.6e-06 56.2 94 37.2
Nn4g22756 Nelumbo nucifera HOM05D000110 ORTHO05D000024 2.6e-06 56.2 84 41.7
Phvul.002G144900 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 2.6e-06 56.2 78 41.0
Phvul.002G230100 Phaseolus vulgaris HOM05D000110 ORTHO05D000024 2.6e-06 56.2 116 37.9
Potri.012G081300 Populus trichocarpa HOM05D000110 ORTHO05D000024 2.6e-06 56.2 92 40.2
TWI77G0751 Tripterygium wilfordii HOM05D000110 ORTHO05D000024 2.6e-06 56.2 128 35.2
Cfa019135 Carpinus fangiana HOM05D000110 ORTHO05D000024 3.4e-06 55.8 83 43.4
GSVIVG01007758001 Vitis vinifera HOM05D000110 ORTHO05D000024 3.4e-06 55.8 83 43.4
Gohir.D09G183800 Gossypium hirsutum HOM05D000110 ORTHO05D000024 4.5e-06 55.5 107 36.4
Lalb_Chr12g0201601 Lupinus albus HOM05D000110 ORTHO05D000024 4.5e-06 55.5 84 36.9
Nitab4.5_0000888g0140 Nicotiana tabacum HOM05D000110 ORTHO05D000024 4.5e-06 55.5 99 37.4
Oeu005921.1 Olea europaea HOM05D000110 ORTHO05D000024 4.5e-06 55.5 77 44.2
Oeu022049.1 Olea europaea HOM05D000110 ORTHO05D000024 4.5e-06 55.5 107 36.4
Oeu022050.2 Olea europaea HOM05D000110 ORTHO05D000024 4.5e-06 55.5 107 36.4
QL09p007759 Quercus lobata HOM05D000110 ORTHO05D000024 4.5e-06 55.5 112 39.3
QL10p011551 Quercus lobata HOM05D000110 ORTHO05D000024 4.5e-06 55.5 112 38.4
Sabra15G0101800 Salix brachista HOM05D000110 ORTHO05D000024 4.5e-06 55.5 84 42.9
TAR374G0463 Trochodendron aralioides HOM05D000110 ORTHO05D000024 4.5e-06 55.5 76 42.1
Gohir.D03G085800 Gossypium hirsutum HOM05D000110 ORTHO05D000024 5.8e-06 55.1 105 35.2
Nn6g32126 Nelumbo nucifera HOM05D000110 ORTHO05D000024 5.8e-06 55.1 65 46.2
PSO832G0907 Papaver somniferum HOM05D000110 ORTHO05D000024 5.8e-06 55.1 51 51.0
Lsat_1_v5_gn_3_12101 Lactuca sativa HOM05D000110 ORTHO05D000024 7.6e-06 54.7 127 30.7
Medtr1g077600 Medicago truncatula HOM05D000110 ORTHO05D000024 7.6e-06 54.7 77 45.5
Oeu010751.1 Olea europaea HOM05D000110 ORTHO05D000024 7.6e-06 54.7 116 33.6
Oeu042946.1 Olea europaea HOM05D000110 ORTHO05D000024 7.6e-06 54.7 109 37.6
Potri.002G174300 Populus trichocarpa HOM05D000110 ORTHO05D000024 7.6e-06 54.7 138 35.5
QL05p041492 Quercus lobata HOM05D000110 ORTHO05D000024 7.6e-06 54.7 53 54.7
THA.LOC104801363 Tarenaya hassleriana HOM05D000110 ORTHO05D000024 7.6e-06 54.7 59 52.5
GSVIVG01027184001 Vitis vinifera HOM05D000110 ORTHO05D000024 7.6e-06 54.7 135 34.1
Atru.chr9.2481 Acer truncatum HOM05D000110 ORTHO05D000024 9.9e-06 54.3 129 34.1
Dinv02540 Davidia involucrata HOM05D000110 ORTHO05D000024 9.9e-06 54.3 78 44.9
HanXRQChr06g0166661 Helianthus annuus HOM05D000110 ORTHO05D000024 9.9e-06 54.3 109 33.9
Lalb_Chr11g0067031 Lupinus albus HOM05D000110 ORTHO05D000024 9.9e-06 54.3 95 41.1
Lalb_Chr23g0271681 Lupinus albus HOM05D000110 ORTHO05D000024 9.9e-06 54.3 96 33.3
Manes.16G029700 Manihot esculenta HOM05D000110 ORTHO05D000024 9.9e-06 54.3 51 56.9
PSO063G1982 Papaver somniferum HOM05D000110 ORTHO05D000024 9.9e-06 54.3 54 48.1
Potri.005G149100 Populus trichocarpa HOM05D000110 ORTHO05D000024 9.9e-06 54.3 88 40.9
Sabra03G0105100 Salix brachista HOM05D000110 ORTHO05D000024 9.9e-06 54.3 136 30.9
SGA_v2.0_scaffold44G16826 Striga asiatica HOM05D000110 ORTHO05D000024 9.9e-06 54.3 51 56.9


User provided reference genes

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