Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 0.0e+00 1177.2 624 100.0
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.1e-294 1016.1 630 86.0
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 1.1e-294 1016.1 630 86.0
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 1.4e-292 1009.2 625 86.6
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 5.9e-288 993.8 652 82.1
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 1.8e-268 929.1 627 79.6
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 2.2e-266 922.2 621 79.5
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 2.9e-266 921.8 627 78.1
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 1.0e-263 913.3 621 78.4
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 1.9e-262 909.1 628 76.6
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 6.0e-256 887.5 622 76.7
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 1.2e-240 836.6 644 72.0
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 8.7e-239 830.5 642 71.7
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 1.4e-217 760.0 630 66.0
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 2.3e-215 752.7 631 65.1
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 1.1e-214 750.4 623 66.6
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 2.5e-214 749.2 629 64.9
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 1.8e-212 743.0 627 64.4
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 6.9e-212 741.1 632 65.7
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.5e-211 740.0 619 65.1
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 1.5e-211 740.0 631 64.8
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 2.0e-211 739.6 632 64.9
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.3e-210 736.9 633 64.5
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 1.9e-209 733.0 632 63.3
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 1.6e-208 729.9 634 62.8
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 4.6e-208 728.4 652 62.7
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.0e-207 725.7 634 62.6
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.1e-206 723.8 633 62.6
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 1.5e-206 723.4 641 62.6
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 7.4e-206 721.1 638 61.9
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 7.4e-206 721.1 623 65.2
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.7e-205 719.9 628 62.7
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 3.7e-205 718.8 632 63.1
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 1.8e-204 716.5 632 63.1
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 1.8e-204 716.5 629 61.7
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 1.8e-204 716.5 639 62.1
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 3.1e-204 715.7 631 61.8
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.1e-204 715.7 627 62.4
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 5.3e-204 714.9 633 62.9
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 6.9e-204 714.5 651 61.8
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.2e-200 703.7 631 61.6
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 2.1e-200 703.0 628 61.9
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 2.1e-200 703.0 655 58.8
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 7.9e-200 701.0 636 61.9
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 3.9e-199 698.7 632 61.4
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 5.1e-199 698.4 649 60.4
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 1.1e-198 697.2 649 60.6
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 2.0e-198 696.4 635 61.9
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.0e-198 696.4 649 60.2
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 8.2e-197 691.0 659 59.2
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 1.8e-196 689.9 657 59.4
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 4.1e-196 688.7 633 60.0
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 9.1e-196 687.6 627 60.8
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 1.2e-195 687.2 654 59.8
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 1.5e-195 686.8 655 60.9
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 1.5e-195 686.8 638 58.8
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 2.0e-195 686.4 654 59.3
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 2.6e-195 686.0 638 59.4
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 3.2e-193 679.1 628 59.6
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 4.2e-193 678.7 656 59.6
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 6.1e-192 674.9 656 59.6
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 3.9e-191 672.2 634 59.5
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 8.8e-191 671.0 634 59.3
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 1.1e-190 670.6 623 60.0
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 1.1e-190 670.6 655 58.8
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 2.0e-190 669.8 660 59.2
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 3.3e-190 669.1 632 59.5
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 3.3e-190 669.1 652 59.2
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 4.4e-190 668.7 643 57.7
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 7.4e-190 667.9 629 60.7
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 7.4e-190 667.9 611 61.0
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 5.9e-187 658.3 621 59.4
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 3.6e-184 649.0 642 58.1
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 2.3e-183 646.4 653 55.9
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 1.2e-182 644.0 659 55.8
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 4.4e-182 642.1 637 58.4
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 4.8e-181 638.6 633 58.0
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 1.6e-179 633.6 635 58.1
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 8.5e-178 627.9 656 55.6
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 7.2e-177 624.8 622 56.8
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 6.1e-176 621.7 574 59.6
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 5.2e-175 618.6 555 61.3
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.7e-173 613.6 625 56.3
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 1.7e-170 603.6 640 56.9
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 1.7e-170 603.6 643 54.7
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 5.0e-170 602.1 624 55.3
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 8.9e-167 591.3 655 51.6
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 1.7e-165 587.0 656 51.8
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 5.4e-164 582.0 472 64.4
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 5.9e-163 578.6 661 51.3
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 1.7e-162 577.0 661 51.1
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 2.3e-162 576.6 653 50.4
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 1.2e-160 570.9 645 52.2
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 3.6e-160 569.3 655 51.0
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.8e-159 567.0 656 50.3
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 4.0e-159 565.8 657 50.2
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 3.4e-158 562.8 657 49.9
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 5.8e-158 562.0 656 49.8
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 4.9e-157 558.9 669 48.9
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.8e-127 460.7 660 43.5
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 6.9e-119 432.2 372 63.7
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 1.5e-118 431.0 651 40.2
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 7.6e-118 428.7 675 41.3
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 3.5e-115 419.9 315 70.8
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 2.5e-113 413.7 611 43.2
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 4.8e-112 409.5 620 40.3
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 6.9e-111 405.6 628 44.3
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 3.2e-108 396.7 534 45.7
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 4.5e-102 376.3 370 54.9
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 7.2e-100 369.0 359 55.4
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.5e-94 351.3 321 59.5
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 9.7e-73 278.9 600 33.8
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 1.6e-62 245.0 220 61.4
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 1.2e-46 192.2 217 51.2
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.7e-40 171.8 221 42.5
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 4.9e-40 170.2 320 37.8
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 7.8e-38 162.9 259 41.7
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 4.4e-25 120.6 355 30.1
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.4e-15 88.2 178 30.9
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 1.0e-13 82.8 88 51.1
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 8.1e-11 73.2 230 30.0
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 3.2e-07 61.2 122 41.0


User provided reference genes

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