Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4662 Trifolium pratense HOM05D000003 ORTHO05D000006 9.2e-107 390.2 191 100.0
TPR.G11139 Trifolium pratense HOM05D000003 ORTHO05D000007 5.8e-61 238.0 185 64.9
TPR.G10050 Trifolium pratense HOM05D000003 ORTHO05D000006 3.3e-56 222.2 178 64.0
TPR.G34599 Trifolium pratense HOM05D000003 ORTHO05D000006 2.0e-53 213.0 178 60.1
TPR.G39703 Trifolium pratense HOM05D000003 ORTHO05D000007 6.5e-28 128.3 204 35.3
TPR.G20743 Trifolium pratense HOM05D000003 ORTHO05D000006 6.1e-26 121.7 190 33.2
Sabra15G0020900 Salix brachista HOM05D000003 ORTHO05D000006 9.7e-24 114.4 170 37.1
TPR.G14759 Trifolium pratense HOM05D000003 ORTHO05D000006 6.5e-20 101.7 166 31.9
TPR.G35802 Trifolium pratense HOM05D000003 ORTHO05D000007 1.0e-17 94.4 120 43.3
Sabra15G0018400 Salix brachista HOM05D000003 ORTHO05D000006 1.4e-17 94.0 141 38.3
Glyma.07G238625 Glycine max HOM05D000003 ORTHO05D000006 1.8e-17 93.6 171 31.6
TPR.G21254 Trifolium pratense HOM05D000003 ORTHO05D000006 9.1e-14 81.3 172 30.2
TPR.G27477 Trifolium pratense HOM05D000003 ORTHO05D000006 1.1e-11 74.3 64 51.6
arahy.Tifrunner.gnm1.ann1.7MJ6N9 Arachis hypogaea HOM05D000003 ORTHO05D000006 1.5e-11 73.9 134 30.6
RcHm_v2.0_Chr5g0053531 Rosa chinensis HOM05D000003 ORTHO05D000004 3.6e-10 69.3 175 28.6
TPR.G22362 Trifolium pratense HOM05D000003 ORTHO05D000004 3.6e-10 69.3 79 38.0
Atru.chr1.3365 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-10 68.9 165 28.5
TPR.G33924 Trifolium pratense HOM05D000003 ORTHO05D000004 4.7e-10 68.9 113 32.7
TPR.G7953 Trifolium pratense HOM05D000003 ORTHO05D000004 4.7e-10 68.9 86 38.4
Potri.018G064450 Populus trichocarpa HOM05D000003 ORTHO05D000006 1.0e-09 67.8 132 31.1
TPR.G29398 Trifolium pratense HOM05D000003 ORTHO05D000007 2.3e-09 66.6 39 74.4
FvH4_2g12002 Fragaria vesca HOM05D000003 ORTHO05D000006 3.0e-09 66.2 166 28.9
Atru.chr5.3511 Acer truncatum HOM05D000003 ORTHO05D000006 6.8e-09 65.1 166 29.5
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 8.8e-09 64.7 158 29.1
Lj2g0021734 Lotus japonicus HOM05D000003 ORTHO05D000006 1.5e-08 63.9 163 31.9
RcHm_v2.0_Chr1g0342601 Rosa chinensis HOM05D000003 ORTHO05D000006 3.4e-08 62.8 166 28.3
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 4.4e-08 62.4 166 28.9
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 5.7e-08 62.0 166 27.7
FvH4_2g11954 Fragaria vesca HOM05D000003 ORTHO05D000006 5.7e-08 62.0 146 30.1
CSS0042649 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 9.8e-08 61.2 177 23.2
Potri.003G010697 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.8e-08 61.2 179 28.5
FvH4_5g27994 Fragaria vesca HOM05D000003 ORTHO05D000004 1.7e-07 60.5 167 28.7
Atru.chr13.1144 Acer truncatum HOM05D000003 ORTHO05D000006 4.8e-07 58.9 125 29.6
Atru.chr7.714 Acer truncatum HOM05D000003 ORTHO05D000006 4.8e-07 58.9 151 29.1
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 4.8e-07 58.9 166 30.1
Atru.chr3.1522 Acer truncatum HOM05D000003 ORTHO05D000006 6.3e-07 58.5 151 28.5
LjContig00029g0014189 Lotus japonicus HOM05D000003 ORTHO05D000006 6.3e-07 58.5 92 32.6
PGR119G2417 Punica granatum HOM05D000003 ORTHO05D000004 6.3e-07 58.5 167 24.6
TPR.G20371 Trifolium pratense HOM05D000003 ORTHO05D000006 6.3e-07 58.5 62 40.3
Atru.chr7.256 Acer truncatum HOM05D000003 ORTHO05D000006 1.1e-06 57.8 158 29.7
Atru.chr9.1348 Acer truncatum HOM05D000003 ORTHO05D000006 1.1e-06 57.8 168 28.0
FvH4_5g34261 Fragaria vesca HOM05D000003 ORTHO05D000006 1.4e-06 57.4 166 29.5
Atru.chr2.1761 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 57.0 159 28.3
Glyma.18G081301 Glycine max HOM05D029590 ORTHO05D022783 2.4e-06 56.6 60 43.3
Atru.chr5.349 Acer truncatum HOM05D000003 ORTHO05D000006 3.1e-06 56.2 118 29.7
Sabra08G0134900 Salix brachista HOM05D000003 ORTHO05D000006 3.1e-06 56.2 149 26.8
CANSAT01G0200 Cannabis sativa HOM05D000003 ORTHO05D000006 5.4e-06 55.5 187 25.1


User provided reference genes

Program Settings