Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4557 Trifolium pratense HOM05D013241 ORTHO05D011012 0.0e+00 1196.0 616 100.0
Medtr2g016640 Medicago truncatula HOM05D013241 ORTHO05D011012 2.0e-243 845.9 638 73.0
Ca_00458_v3 Cicer arietinum L. HOM05D013241 ORTHO05D011012 3.4e-227 792.0 633 70.0
Psat1g195680 Pisum sativum HOM05D013241 ORTHO05D011012 1.2e-187 660.6 512 72.3
Lj6g0008807 Lotus japonicus HOM05D013241 ORTHO05D011012 3.2e-169 599.4 662 55.4
Lalb_Chr18g0054711 Lupinus albus HOM05D013241 ORTHO05D011012 1.0e-143 514.6 667 49.5
Glyma.13G227600 Glycine max HOM05D013241 ORTHO05D011012 2.7e-139 500.0 633 50.2
arahy.Tifrunner.gnm1.ann1.69Z0CE Arachis hypogaea HOM05D013241 ORTHO05D011012 5.0e-130 469.2 646 48.8
arahy.Tifrunner.gnm1.ann1.62N0H4 Arachis hypogaea HOM05D000074 ORTHO05D011012 2.5e-129 466.8 646 48.5
Phvul.006G174000 Phaseolus vulgaris HOM05D013241 ORTHO05D011012 5.2e-127 459.1 643 47.3
VMungo0540G2099 Vigna mungo HOM05D013241 ORTHO05D011012 3.5e-123 446.4 643 47.0
QL02p027097 Quercus lobata HOM05D013249 ORTHO05D011012 1.9e-36 158.3 421 29.2
Haze_09217 Corylus avellana HOM05D013249 ORTHO05D011012 1.1e-31 142.5 532 29.1
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 1.2e-30 139.0 420 29.0
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 6.1e-27 126.7 419 27.9
Lalb_Chr20g0117541 Lupinus albus HOM05D013241 ORTHO05D011012 4.1e-23 114.0 99 55.6
Prupe.5G135100 Prunus persica HOM05D013249 ORTHO05D011012 1.0e-21 109.4 453 25.6
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.8e-18 98.6 535 25.2
CiPaw.12G074500 Carya illinoinensis HOM05D011672 ORTHO05D011012 4.0e-18 97.4 329 28.3
MD06G1124500 Malus domestica HOM05D013249 ORTHO05D011012 4.0e-18 97.4 399 25.6
Sabra11G0134500 Salix brachista HOM05D011672 ORTHO05D011012 4.4e-17 94.0 382 29.1
Duzib068G0278 Durio zibethinus HOM05D011672 ORTHO05D011012 2.7e-14 84.7 442 25.8
TWI81G0792 Tripterygium wilfordii HOM05D011672 ORTHO05D011012 3.5e-14 84.3 420 25.5
Medtr1g071870 Medicago truncatula HOM05D013241 ORTHO05D011012 3.6e-11 74.3 55 61.8
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 8.0e-11 73.2 426 25.6
Thecc.03G215600 Theobroma cacao HOM05D011672 ORTHO05D011012 8.0e-11 73.2 504 23.4
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 1.0e-10 72.8 473 25.6
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 1.2e-09 69.3 496 24.6
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 4.9e-08 63.9 465 21.7
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.4e-07 62.4 426 25.8
COL.COLO4_10845 Corchorus olitorius HOM05D011672 ORTHO05D011012 5.4e-07 60.5 606 24.9
Potri.011G149601 Populus trichocarpa HOM05D011672 ORTHO05D011012 7.0e-07 60.1 223 26.5
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 4.5e-06 57.4 443 23.9
RcHm_v2.0_Chr7g0187831 Rosa chinensis HOM05D013249 ORTHO05D011012 4.5e-06 57.4 160 28.1


User provided reference genes

Program Settings