Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4458 Trifolium pratense HOM05D005110 ORTHO05D006074 6.1e-36 153.7 80 100.0
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 1.4e-24 115.9 69 81.2
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 7.2e-21 103.6 69 69.6
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 3.3e-18 94.7 68 67.6
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 3.3e-18 94.7 68 70.6
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 1.7e-17 92.4 70 64.3
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 2.2e-17 92.0 70 64.3
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 2.8e-17 91.7 68 67.6
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 3.7e-17 91.3 68 66.2
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 6.3e-17 90.5 68 66.2
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 1.8e-16 89.0 69 66.7
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 9.1e-16 86.7 68 61.8
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 2.0e-15 85.5 68 60.3
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 2.6e-15 85.1 68 61.8
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 5.9e-15 84.0 68 58.8
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 2.2e-14 82.0 68 61.8
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 3.8e-14 81.3 69 62.3
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 3.8e-14 81.3 68 58.8
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 5.0e-14 80.9 68 60.3
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 5.0e-14 80.9 68 60.3
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 6.5e-14 80.5 69 62.3
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 1.1e-13 79.7 68 58.8
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 1.5e-13 79.3 69 60.9
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 1.9e-13 79.0 68 57.4
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 4.2e-13 77.8 68 57.4
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 1.2e-12 76.3 68 57.4
Haze_23356 Corylus avellana HOM05D005110 ORTHO05D006074 1.2e-12 76.3 68 55.9
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 1.6e-12 75.9 68 54.4
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 2.1e-12 75.5 70 52.9
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 2.1e-12 75.5 70 54.3
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 2.7e-12 75.1 68 57.4
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 2.7e-12 75.1 68 52.9
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 2.7e-12 75.1 68 54.4
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 2.7e-12 75.1 68 52.9
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 4.7e-12 74.3 68 52.9
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 4.7e-12 74.3 60 60.0
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 6.1e-12 73.9 70 58.6
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 1.0e-11 73.2 61 62.3
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 1.4e-11 72.8 59 59.3
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 1.4e-11 72.8 59 54.2
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 1.4e-11 72.8 68 52.9
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 1.4e-11 72.8 62 56.5
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 1.8e-11 72.4 60 58.3
Actinidia35470 Actinidia chinensis HOM05D005110 ORTHO05D006074 2.3e-11 72.0 62 54.8
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 3.0e-11 71.6 68 52.9
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 3.0e-11 71.6 62 56.5
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 3.0e-11 71.6 62 56.5
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 3.0e-11 71.6 62 56.5
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 3.0e-11 71.6 62 56.5
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 3.0e-11 71.6 59 61.0
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 4.0e-11 71.2 69 53.6
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 5.2e-11 70.9 68 52.9
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 6.7e-11 70.5 68 51.5
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 6.7e-11 70.5 68 54.4
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 6.7e-11 70.5 68 54.4
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 8.8e-11 70.1 59 59.3
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 8.8e-11 70.1 60 56.7
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 8.8e-11 70.1 68 52.9
Manes.04G002101 Manihot esculenta HOM05D005110 ORTHO05D006074 1.1e-10 69.7 65 49.2
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 1.1e-10 69.7 68 51.5
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 1.5e-10 69.3 68 51.5
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 3.3e-10 68.2 68 50.0
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 3.3e-10 68.2 68 50.0
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 4.4e-10 67.8 68 50.0
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 4.4e-10 67.8 72 52.8
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 4.4e-10 67.8 68 51.5
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 5.7e-10 67.4 68 51.5
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 5.7e-10 67.4 62 51.6
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 7.5e-10 67.0 63 47.6
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 7.5e-10 67.0 72 52.8
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 9.7e-10 66.6 68 50.0
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 9.7e-10 66.6 62 53.2
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 2.2e-09 65.5 63 50.8
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 2.8e-09 65.1 68 48.5
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 2.8e-09 65.1 68 50.0
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 3.7e-09 64.7 59 49.2
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 4.8e-09 64.3 62 46.8
MSTRG.17701 Avicennia marina HOM05D005110 ORTHO05D006074 6.3e-09 63.9 69 46.4
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 8.2e-09 63.5 59 52.5
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 8.2e-09 63.5 59 47.5
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 8.2e-09 63.5 59 47.5
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 1.1e-08 63.2 59 50.8
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 1.1e-08 63.2 59 54.2
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 1.1e-08 63.2 69 49.3
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 1.4e-08 62.8 68 50.0
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 1.4e-08 62.8 71 50.7
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 1.8e-08 62.4 59 50.8
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 1.8e-08 62.4 71 45.1
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 2.4e-08 62.0 65 49.2
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 2.4e-08 62.0 69 43.5
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 2.4e-08 62.0 59 52.5
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 4.1e-08 61.2 69 49.3
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 4.1e-08 61.2 59 50.8
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 4.1e-08 61.2 69 46.4
vmacro14354 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 7.0e-08 60.5 59 50.8
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 9.1e-08 60.1 68 41.2
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 1.2e-07 59.7 63 44.4
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 1.2e-07 59.7 63 42.9
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 1.6e-07 59.3 69 43.5
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 2.0e-07 58.9 60 46.7
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 2.7e-07 58.5 59 47.5
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 2.7e-07 58.5 59 47.5
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 2.7e-07 58.5 59 49.2
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 3.5e-07 58.2 62 46.8
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 3.5e-07 58.2 59 47.5
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 4.5e-07 57.8 65 41.5
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 4.5e-07 57.8 64 45.3
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 5.9e-07 57.4 59 47.5
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 5.9e-07 57.4 58 41.4
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 5.9e-07 57.4 58 41.4
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 7.7e-07 57.0 59 45.8
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 7.7e-07 57.0 59 49.2
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 7.7e-07 57.0 59 44.1
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 1.3e-06 56.2 65 41.5
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 1.7e-06 55.8 67 43.3
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 2.2e-06 55.5 68 39.7
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 2.2e-06 55.5 68 44.1
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 2.2e-06 55.5 68 44.1
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 2.2e-06 55.5 64 42.2
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 2.9e-06 55.1 62 45.2
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 2.9e-06 55.1 62 45.2
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 2.9e-06 55.1 59 47.5
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 2.9e-06 55.1 65 41.5
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 3.8e-06 54.7 65 38.5
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 8.5e-06 53.5 62 43.5
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 8.5e-06 53.5 62 43.5


User provided reference genes

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