Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 1.7e-279 965.3 483 100.0
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 4.0e-215 751.5 492 78.5
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 1.8e-196 689.5 470 73.8
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 8.6e-186 654.1 494 68.8
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 9.2e-180 634.0 485 66.8
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 2.8e-168 595.9 502 63.1
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 1.7e-165 586.6 492 62.0
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 3.8e-165 585.5 485 61.4
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 4.9e-165 585.1 485 61.2
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 3.6e-160 568.9 504 58.5
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 4.5e-158 562.0 484 59.5
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 2.2e-157 559.7 480 61.0
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 2.9e-157 559.3 483 60.7
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 3.8e-157 558.9 481 58.4
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 1.9e-156 556.6 491 59.3
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 5.4e-156 555.1 483 59.0
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 1.6e-155 553.5 491 58.7
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 8.7e-154 547.7 475 59.4
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 1.9e-153 546.6 483 57.6
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 9.6e-153 544.3 487 56.9
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 1.3e-152 543.9 490 57.8
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 3.7e-152 542.3 591 52.6
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 4.8e-152 542.0 483 59.0
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 5.3e-151 538.5 483 56.3
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.6e-150 536.2 486 56.6
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.2e-147 527.3 486 56.4
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 1.2e-147 527.3 488 57.0
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 7.9e-147 524.6 488 55.7
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 3.0e-146 522.7 502 56.0
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 9.6e-145 517.7 484 54.1
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 1.1e-143 514.2 488 56.4
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 1.8e-143 513.5 485 52.6
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 6.5e-141 505.0 486 54.1
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 6.0e-139 498.4 326 77.9
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 7.9e-139 498.0 459 56.0
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 5.7e-137 491.9 484 53.3
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 9.7e-137 491.1 492 51.8
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 1.3e-136 490.7 489 49.9
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 1.8e-135 486.9 488 54.7
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 1.8e-135 486.9 494 53.4
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 9.0e-135 484.6 470 53.0
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 1.2e-134 484.2 496 53.6
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 4.5e-134 482.3 404 64.6
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 2.9e-133 479.6 489 51.1
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 3.8e-133 479.2 487 53.2
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 3.6e-131 472.6 534 51.1
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 4.6e-131 472.2 490 51.6
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 1.8e-130 470.3 483 52.0
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 3.0e-130 469.5 489 50.9
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 3.0e-130 469.5 372 68.0
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 8.8e-130 468.0 488 53.5
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 5.7e-129 465.3 562 46.3
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 2.2e-128 463.4 488 51.4
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 1.8e-127 460.3 491 51.7
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 3.1e-127 459.5 479 51.4
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 1.2e-126 457.6 498 50.4
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 2.6e-126 456.4 483 51.6
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.4e-126 456.1 491 51.5
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 3.8e-125 452.6 471 50.3
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 1.9e-124 450.3 491 50.7
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.2e-124 449.5 491 50.9
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 7.2e-124 448.4 589 44.1
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 1.2e-123 447.6 487 50.1
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 1.2e-123 447.6 477 50.5
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 8.8e-122 441.4 491 50.5
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 1.1e-121 441.0 472 50.6
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 5.7e-121 438.7 510 49.0
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 9.7e-121 438.0 487 49.9
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 3.1e-119 433.0 487 49.7
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 7.2e-116 421.8 490 48.6
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 9.4e-116 421.4 491 47.3
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 6.7e-114 415.2 350 62.3
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 2.8e-112 409.8 353 59.2
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 1.8e-111 407.1 473 45.7
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 5.9e-110 402.1 458 47.8
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 1.7e-109 400.6 399 52.9
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.7e-109 400.6 458 47.8
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 3.3e-105 386.3 459 46.8
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 3.2e-100 369.8 489 44.6
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 9.4e-100 368.2 408 48.3
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 1.4e-98 364.4 400 48.8
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 1.3e-96 357.8 490 43.3
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 6.1e-91 339.0 499 40.1
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 2.8e-88 330.1 518 40.9
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 2.7e-86 323.6 316 56.0
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 9.5e-84 315.1 558 37.8
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 1.0e-77 295.0 289 54.7
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 4.1e-71 273.1 490 37.6
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 2.3e-66 257.3 219 59.4
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 4.0e-66 256.5 413 37.5
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 2.4e-47 194.1 196 51.0
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 2.7e-46 190.7 234 48.7
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 2.8e-35 154.1 184 47.8
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 8.1e-35 152.5 130 61.5
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 3.7e-27 127.1 130 50.0
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 2.4e-26 124.4 217 38.7
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 3.5e-22 110.5 182 35.7
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 6.1e-22 109.8 165 42.4
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 6.1e-22 109.8 165 42.4
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 7.9e-22 109.4 174 41.4
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 6.7e-21 106.3 72 72.2
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 4.1e-18 97.1 107 46.7
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 1.1e-15 89.0 125 42.4
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 2.5e-15 87.8 89 48.3
MSTRG.9273 Avicennia marina HOM05D003769 ORTHO05D004521 3.6e-14 84.0 248 30.2
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 8.8e-13 79.3 52 63.5
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 1.5e-12 78.6 65 56.9
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 1.3e-11 75.5 89 49.4
SMO358G0628 Selaginella moellendorffii HOM05D004758 ORTHO05D006063 2.2e-11 74.7 211 31.3
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 2.8e-11 74.3 124 31.5
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 5.3e-10 70.1 64 48.4
SGA_v2.0_scaffold612G53192 Striga asiatica HOM05D003769 ORTHO05D004521 2.6e-09 67.8 248 27.4
DCAR_027817 Daucus carota HOM05D003769 ORTHO05D004521 3.4e-09 67.4 248 26.6
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 7.7e-09 66.2 40 75.0
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 2.9e-08 64.3 298 27.2
Actinidia08754 Actinidia chinensis HOM05D004758 ORTHO05D006063 7.2e-07 59.7 213 26.8
EL10Ac7g18031 Beta vulgaris HOM05D000453 ORTHO05D000387 7.2e-07 59.7 145 32.4
Cpa.g.sc65.26 Carica papaya HOM05D002332 ORTHO05D002509 1.6e-06 58.5 188 29.8
Duzib248G0831 Durio zibethinus HOM05D000453 ORTHO05D000387 2.7e-06 57.8 139 30.9
AUR62022086 Chenopodium quinoa HOM05D000453 ORTHO05D000387 3.6e-06 57.4 155 29.0
AagrBONN_evm.TU.Sc2ySwM_344.667 Anthoceros agrestis HOM05D021458 ORTHO05D023500 4.7e-06 57.0 229 24.9
Ciclev10024237m.g Citrus clementina HOM05D000453 ORTHO05D000387 4.7e-06 57.0 150 32.0
MELO3C026239.2 Cucumis melo HOM05D000464 ORTHO05D006292 6.1e-06 56.6 231 25.1
CsaV3_1G000870 Cucumis sativus L. HOM05D000464 ORTHO05D006292 6.1e-06 56.6 231 25.1


User provided reference genes

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