Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 1.9e-117 426.0 236 100.0
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 1.2e-100 370.2 204 91.7
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 7.4e-98 360.9 193 92.7
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 2.7e-84 315.8 206 79.6
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 3.5e-84 315.5 206 79.1
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 8.7e-83 310.8 235 80.0
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 5.7e-82 308.1 192 79.7
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 1.2e-79 300.4 210 75.2
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 7.7e-79 297.7 211 73.0
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 4.2e-77 292.0 160 90.0
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 1.4e-75 287.0 207 72.5
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.5e-71 273.5 175 78.3
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 2.6e-71 272.7 180 77.8
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 1.7e-70 270.0 196 72.4
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 8.5e-70 267.7 200 69.0
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 1.1e-69 267.3 159 82.4
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 1.9e-69 266.5 191 71.7
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 3.2e-69 265.8 174 74.7
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 9.4e-69 264.2 194 71.1
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 9.4e-69 264.2 200 69.0
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 3.6e-68 262.3 199 67.8
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 4.7e-68 261.9 200 67.0
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 6.1e-68 261.5 191 72.8
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 7.9e-68 261.2 173 75.1
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 7.9e-68 261.2 198 70.2
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 7.9e-68 261.2 170 74.1
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.0e-67 260.8 201 68.7
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 2.3e-67 259.6 188 68.6
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 3.0e-67 259.2 180 71.1
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 3.0e-67 259.2 198 67.2
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 3.0e-67 259.2 173 76.3
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 3.0e-67 259.2 175 76.0
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 5.1e-67 258.5 201 63.7
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 8.8e-67 257.7 188 70.7
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 8.8e-67 257.7 173 75.7
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 1.1e-66 257.3 194 70.6
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 1.5e-66 256.9 201 66.2
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 2.0e-66 256.5 195 67.7
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 3.3e-66 255.8 204 66.2
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 3.3e-66 255.8 170 77.6
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 1.3e-65 253.8 198 66.2
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 3.7e-65 252.3 177 67.8
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 8.2e-65 251.1 177 67.2
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 1.8e-64 250.0 205 62.4
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 4.1e-64 248.8 204 63.7
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 4.1e-64 248.8 192 65.1
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 5.3e-64 248.4 174 71.8
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 7.0e-64 248.1 165 73.9
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 7.0e-64 248.1 174 70.1
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 1.5e-63 246.9 165 73.3
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 2.6e-63 246.1 205 62.0
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 2.6e-63 246.1 172 72.7
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 3.5e-63 245.7 177 67.8
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 3.5e-63 245.7 177 67.8
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 3.5e-63 245.7 177 67.8
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 7.7e-63 244.6 167 73.1
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 2.2e-62 243.0 210 62.9
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 3.8e-62 242.3 195 67.7
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 5.0e-62 241.9 169 69.8
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 5.0e-62 241.9 202 61.9
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 2.5e-61 239.6 212 61.8
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 5.5e-61 238.4 185 67.6
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 7.2e-61 238.0 156 77.6
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 9.4e-61 237.7 195 63.6
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 1.2e-60 237.3 135 83.7
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 1.2e-60 237.3 174 69.5
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 2.1e-60 236.5 183 66.1
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 2.7e-60 236.1 157 77.1
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 6.1e-60 235.0 147 76.2
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 8.0e-60 234.6 136 81.6
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 1.0e-59 234.2 173 73.4
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 4.0e-59 232.3 165 70.3
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 5.2e-59 231.9 189 63.0
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 2.0e-58 229.9 175 69.1
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 7.5e-58 228.0 141 75.9
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 7.5e-58 228.0 199 59.3
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 9.7e-58 227.6 189 62.4
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 2.8e-57 226.1 184 63.6
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 1.4e-56 223.8 167 66.5
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.4e-56 223.8 167 66.5
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.4e-56 223.8 166 66.3
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.4e-56 223.0 219 58.0
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 4.1e-56 222.2 166 66.9
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.9e-54 216.1 178 62.4
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 2.5e-53 213.0 193 61.1
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.1e-52 209.9 182 64.8
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.0e-51 207.6 175 62.3
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 2.3e-51 206.5 134 70.9
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 6.8e-51 204.9 147 70.7
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 8.8e-51 204.5 113 81.4
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 9.8e-50 201.1 197 55.8
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 2.4e-48 196.4 193 56.5
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 4.0e-43 179.1 192 51.0
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 3.4e-42 176.0 144 63.9
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 2.8e-41 172.9 194 51.5
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.4e-40 170.6 217 50.7
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 5.4e-40 168.7 169 53.3
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 1.4e-35 154.1 86 81.4
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 7.5e-34 148.3 201 47.3
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 8.3e-33 144.8 146 49.3
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 4.6e-31 139.0 156 48.1
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 5.2e-27 125.6 64 85.9
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 4.1e-24 115.9 83 65.1
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 4.7e-20 102.4 88 65.9
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 9.8e-18 94.7 194 39.2
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 1.1e-16 91.3 56 71.4
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.1e-16 91.3 126 48.4
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 4.1e-16 89.4 62 66.1
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.5e-13 80.1 73 61.6
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 3.3e-13 79.7 97 53.6
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.6e-07 60.8 39 64.1
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 6.6e-06 55.5 104 34.6


User provided reference genes

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