Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4305 Trifolium pratense HOM05D000005 ORTHO05D008900 1.9e-69 265.8 136 100.0
TPR.G4300 Trifolium pratense HOM05D000005 ORTHO05D008900 6.0e-28 127.9 82 82.9
TPR.G4272 Trifolium pratense HOM05D000005 ORTHO05D008900 5.1e-27 124.8 83 80.7
Ca_04312_v3 Cicer arietinum L. HOM05D000005 ORTHO05D008900 1.5e-10 70.1 48 72.9
TPR.G4259 Trifolium pratense HOM05D000005 ORTHO05D008900 1.5e-10 70.1 43 81.4
TPR.G4346 Trifolium pratense HOM05D000005 ORTHO05D008900 2.0e-10 69.7 39 84.6
Medtr6g015430 Medicago truncatula HOM05D000005 ORTHO05D000012 4.4e-10 68.6 42 78.6
Medtr6g015455 Medicago truncatula HOM05D000005 ORTHO05D000012 4.4e-10 68.6 53 67.9
Ca_04314_v3 Cicer arietinum L. HOM05D000005 ORTHO05D008900 5.7e-10 68.2 43 79.1
Medtr6g015435 Medicago truncatula HOM05D000005 ORTHO05D000012 5.7e-10 68.2 53 67.9
Medtr6g015595 Medicago truncatula HOM05D000005 ORTHO05D008900 1.7e-09 66.6 48 72.9
TPR.G4265 Trifolium pratense HOM05D000005 ORTHO05D008900 1.7e-09 66.6 40 77.5
Medtr6g015505 Medicago truncatula HOM05D000005 ORTHO05D000012 2.2e-09 66.2 40 85.0
TPR.G4332 Trifolium pratense HOM05D000005 ORTHO05D000012 2.2e-09 66.2 39 76.9
Medtr6g015745 Medicago truncatula HOM05D000005 ORTHO05D000012 2.8e-09 65.9 40 80.0
TPR.G24799 Trifolium pratense HOM05D000005 ORTHO05D008900 3.7e-09 65.5 54 59.3
TPR.G4324 Trifolium pratense HOM05D000005 ORTHO05D000012 4.8e-09 65.1 40 80.0
Ca_04313_v3 Cicer arietinum L. HOM05D000005 ORTHO05D008900 8.2e-09 64.3 39 79.5
Medtr3g104130 Medicago truncatula HOM05D000005 ORTHO05D008900 1.1e-08 63.9 39 84.6
Medtr3g104210 Medicago truncatula HOM05D000005 ORTHO05D008900 1.1e-08 63.9 39 84.6
TPR.G30444 Trifolium pratense HOM05D000005 ORTHO05D000012 1.1e-08 63.9 42 76.2
Ca_04315_v3 Cicer arietinum L. HOM05D000005 ORTHO05D008900 1.4e-08 63.5 39 82.1
Medtr6g015405 Medicago truncatula HOM05D000005 ORTHO05D000012 1.4e-08 63.5 40 75.0
Medtr6g015410 Medicago truncatula HOM05D000005 ORTHO05D000012 1.4e-08 63.5 59 55.9
Medtr7g091540 Medicago truncatula HOM05D000005 ORTHO05D000012 1.8e-08 63.2 39 74.4
TPR.G4302 Trifolium pratense HOM05D000005 ORTHO05D000012 1.8e-08 63.2 36 88.9
Lj3g0027566 Lotus japonicus HOM05D000005 ORTHO05D000012 2.4e-08 62.8 40 75.0
Psat1g049920 Pisum sativum HOM05D000005 ORTHO05D008900 2.4e-08 62.8 42 69.0
Glyma.03G077400 Glycine max HOM05D000005 ORTHO05D000012 3.1e-08 62.4 39 76.9
Medtr6g015680 Medicago truncatula HOM05D000005 ORTHO05D000012 3.1e-08 62.4 39 74.4
Psat5g289040 Pisum sativum HOM05D000005 ORTHO05D008900 3.1e-08 62.4 41 73.2
Medtr4g023400 Medicago truncatula HOM05D000005 ORTHO05D000012 4.1e-08 62.0 42 66.7
Medtr6g015575 Medicago truncatula HOM05D000005 ORTHO05D008900 4.1e-08 62.0 40 75.0
Medtr6g015580 Medicago truncatula HOM05D000005 ORTHO05D000012 4.1e-08 62.0 55 58.2
Medtr6g016000 Medicago truncatula HOM05D000005 ORTHO05D000012 5.3e-08 61.6 55 61.8
Lj3g0020080 Lotus japonicus HOM05D000005 ORTHO05D000012 7.0e-08 61.2 40 77.5
Medtr6g015695 Medicago truncatula HOM05D000005 ORTHO05D000012 7.0e-08 61.2 39 71.8
Psat1g050000 Pisum sativum HOM05D000005 ORTHO05D008900 7.0e-08 61.2 38 76.3
TPR.G25388 Trifolium pratense HOM05D000005 ORTHO05D008900 7.0e-08 61.2 40 72.5
Medtr3g104170 Medicago truncatula HOM05D000005 ORTHO05D008900 9.1e-08 60.8 39 82.1
Medtr3g104240 Medicago truncatula HOM05D000005 ORTHO05D008900 9.1e-08 60.8 39 82.1
TPR.G30611 Trifolium pratense HOM05D000005 ORTHO05D008900 9.1e-08 60.8 42 64.3
Lj3g0016014 Lotus japonicus HOM05D000005 ORTHO05D000012 1.2e-07 60.5 40 70.0
Medtr4g014570 Medicago truncatula HOM05D000005 ORTHO05D000012 1.2e-07 60.5 40 70.0
Lj3g0016422 Lotus japonicus HOM05D000005 ORTHO05D000012 1.5e-07 60.1 44 70.5
Medtr6g015675 Medicago truncatula HOM05D000005 ORTHO05D008900 1.5e-07 60.1 53 58.5
Medtr6g015600 Medicago truncatula HOM05D000005 ORTHO05D000012 2.0e-07 59.7 54 55.6
Medtr6g015730 Medicago truncatula HOM05D000005 ORTHO05D000012 2.0e-07 59.7 34 88.2
TPR.G21181 Trifolium pratense HOM05D000005 ORTHO05D000012 2.0e-07 59.7 40 70.0
TPR.G39561 Trifolium pratense HOM05D000005 ORTHO05D000012 2.0e-07 59.7 52 57.7
Lj3g0024283 Lotus japonicus HOM05D000005 ORTHO05D000012 2.6e-07 59.3 40 70.0
Medtr6g015665 Medicago truncatula HOM05D000005 ORTHO05D000012 2.6e-07 59.3 35 82.9
TPR.G30602 Trifolium pratense HOM05D000005 ORTHO05D008900 2.6e-07 59.3 42 64.3
Medtr0294s0010 Medicago truncatula HOM05D000005 ORTHO05D000012 4.5e-07 58.5 39 69.2
Psat7g247640 Pisum sativum HOM05D000005 ORTHO05D008900 4.5e-07 58.5 40 67.5
Lj3g0009889 Lotus japonicus HOM05D000005 ORTHO05D000012 5.9e-07 58.2 37 75.7
TPR.G747 Trifolium pratense HOM05D000005 ORTHO05D008900 5.9e-07 58.2 42 64.3
Medtr2g450830 Medicago truncatula HOM05D000005 ORTHO05D000012 7.7e-07 57.8 47 63.8
Glyma.01G112300 Glycine max HOM05D000005 ORTHO05D000012 1.0e-06 57.4 36 75.0
Psat0s1224g0040 Pisum sativum HOM05D000005 ORTHO05D008900 1.0e-06 57.4 39 74.4
TPR.G25384 Trifolium pratense HOM05D000005 ORTHO05D000012 1.0e-06 57.4 37 70.3
Medtr6g015490 Medicago truncatula HOM05D000005 ORTHO05D000012 1.3e-06 57.0 37 75.7
TPR.G4292 Trifolium pratense HOM05D000005 ORTHO05D000012 1.3e-06 57.0 53 58.5
Medtr6g015510 Medicago truncatula HOM05D000005 ORTHO05D000012 2.2e-06 56.2 34 82.4
Lj1g0008084 Lotus japonicus HOM05D000005 ORTHO05D000012 2.9e-06 55.8 50 58.0
Medtr4g014990 Medicago truncatula HOM05D000005 ORTHO05D000012 2.9e-06 55.8 37 67.6
Psat4g125960 Pisum sativum HOM05D000005 ORTHO05D008900 3.8e-06 55.5 42 59.5
TPR.G4325 Trifolium pratense HOM05D000005 ORTHO05D008900 3.8e-06 55.5 34 79.4
Lj3g0020086 Lotus japonicus HOM05D000005 ORTHO05D000012 5.0e-06 55.1 35 77.1
Medtr4g015060 Medicago truncatula HOM05D000005 ORTHO05D000012 5.0e-06 55.1 49 53.1
Medtr6g015450 Medicago truncatula HOM05D000005 ORTHO05D008900 5.0e-06 55.1 39 66.7
Medtr6g015775 Medicago truncatula HOM05D000005 ORTHO05D000012 6.5e-06 54.7 34 76.5
Medtr4g014580 Medicago truncatula HOM05D000005 ORTHO05D000012 8.5e-06 54.3 39 69.2


User provided reference genes

Program Settings