Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 1.7e-76 289.7 191 100.0
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 4.9e-60 235.0 135 91.9
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 1.9e-59 233.0 137 89.1
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.9e-56 223.0 140 85.7
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.9e-56 223.0 140 85.7
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 2.6e-53 212.6 120 90.8
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 3.5e-50 202.2 142 77.5
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 3.0e-49 199.1 141 77.3
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 2.8e-47 192.6 138 76.8
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 1.0e-41 174.1 122 75.4
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.8e-41 173.3 133 69.2
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 5.1e-41 171.8 149 64.4
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 2.5e-40 169.5 130 70.0
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 4.3e-40 168.7 123 70.7
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 9.7e-40 167.5 127 70.9
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 1.3e-39 167.2 130 69.2
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 1.3e-39 167.2 140 65.7
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 8.2e-39 164.5 141 63.8
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 8.2e-39 164.5 118 72.9
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 2.4e-38 162.9 133 66.9
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 2.4e-38 162.9 141 63.1
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 1.2e-37 160.6 124 68.5
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 1.5e-37 160.2 119 69.7
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 2.0e-37 159.8 141 66.7
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 1.0e-36 157.5 135 66.7
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 1.7e-36 156.8 115 70.4
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 2.9e-36 156.0 122 69.7
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 5.0e-36 155.2 122 68.9
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 1.9e-35 153.3 139 60.4
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 1.9e-35 153.3 135 60.0
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 1.6e-34 150.2 148 60.1
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 6.1e-34 148.3 114 69.3
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 1.4e-33 147.1 116 69.0
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 1.8e-33 146.7 116 65.5
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 2.3e-33 146.4 135 64.4
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 3.9e-33 145.6 114 67.5
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 3.9e-33 145.6 143 55.9
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 2.6e-32 142.9 124 58.9
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 2.6e-32 142.9 115 64.3
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 2.6e-32 142.9 125 63.2
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 7.4e-32 141.4 123 61.8
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 9.7e-32 141.0 122 62.3
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 9.7e-32 141.0 95 75.8
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 9.7e-32 141.0 95 75.8
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 1.7e-31 140.2 156 57.7
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 4.8e-31 138.7 168 47.6
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 1.1e-30 137.5 140 53.6
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 3.1e-30 136.0 116 61.2
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 5.3e-30 135.2 131 61.1
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 5.3e-30 135.2 116 59.5
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 2.6e-29 132.9 168 50.0
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 1.3e-28 130.6 141 54.6
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 3.8e-28 129.0 154 52.6
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 2.5e-27 126.3 140 56.4
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 4.2e-27 125.6 138 54.3
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 5.5e-27 125.2 97 67.0
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 9.4e-27 124.4 131 50.4
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 1.2e-26 124.0 116 54.3
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 2.1e-26 123.2 137 54.0
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.0e-25 120.9 122 56.6
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 1.0e-25 120.9 115 53.9
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 1.4e-25 120.6 135 52.6
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 3.0e-25 119.4 97 66.0
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 5.2e-25 118.6 128 55.5
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 4.4e-24 115.5 114 49.1
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 1.3e-23 114.0 119 44.5
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 8.2e-23 111.3 68 82.4
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.8e-22 110.2 94 61.7
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 2.4e-22 109.8 95 60.0
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 2.4e-22 109.8 101 57.4
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 4.1e-22 109.0 66 78.8
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 5.3e-22 108.6 120 45.8
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.6e-21 107.1 74 70.3
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 1.3e-20 104.0 80 67.5
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 6.5e-20 101.7 93 60.2
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 9.4e-19 97.8 97 48.5
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 4.7e-18 95.5 93 54.8
arahy.Tifrunner.gnm1.ann1.NH3ZAS Arachis hypogaea HOM05D007678 ORTHO05D009658 2.2e-15 86.7 67 76.1
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 4.1e-14 82.4 51 74.5
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 1.2e-13 80.9 51 76.5
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 2.0e-13 80.1 113 36.3
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 2.0e-13 80.1 51 72.5
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 3.5e-13 79.3 51 72.5
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 2.9e-12 76.3 46 82.6
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 2.9e-12 76.3 53 73.6
arahy.Tifrunner.gnm1.ann1.BX3238 Arachis hypogaea HOM05D007678 ORTHO05D009658 6.5e-12 75.1 87 59.8
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 2.5e-11 73.2 103 34.0
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 3.6e-10 69.3 51 72.5
arahy.Tifrunner.gnm1.ann1.MMNX5U Arachis hypogaea HOM05D000747 ORTHO05D009658 4.0e-09 65.9 50 72.0
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 5.2e-09 65.5 58 62.1
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 1.2e-08 64.3 111 40.5
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 1.2e-08 64.3 72 48.6
QL02p047905 Quercus lobata HOM05D007678 ORTHO05D009658 1.4e-06 57.4 63 49.2


User provided reference genes

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