Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 1.5e-64 250.0 192 100.0
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 2.3e-20 103.2 132 83.3
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 3.8e-20 102.4 131 84.0
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 1.5e-16 90.5 117 87.2
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 2.6e-16 89.7 131 84.7
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 7.5e-16 88.2 134 81.3
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 2.4e-14 83.2 132 85.6
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 2.0e-13 80.1 132 79.5
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 1.3e-12 77.4 131 67.2
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 1.7e-12 77.0 135 81.5
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 8.6e-12 74.7 132 78.8
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 3.3e-11 72.8 131 69.5
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 4.3e-11 72.4 135 71.1
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 7.3e-11 71.6 136 67.6
arahy.Tifrunner.gnm1.ann1.XR1IK3 Arachis hypogaea HOM05D006719 ORTHO05D007063 1.6e-10 70.5 136 77.2
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 8.0e-10 68.2 136 40.4
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.8e-09 67.0 136 58.8
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.8e-09 67.0 136 58.8
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 6.8e-09 65.1 145 69.7
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 8.9e-09 64.7 142 63.4
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 8.9e-09 64.7 142 63.4
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 1.2e-08 64.3 125 69.6
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.4e-08 62.8 140 65.0
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 3.4e-08 62.8 136 65.4
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 4.4e-08 62.4 140 65.0
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 9.8e-08 61.2 132 62.1
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 2.2e-07 60.1 126 60.3
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 3.7e-07 59.3 139 66.9
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 3.7e-07 59.3 127 70.9
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 3.7e-07 59.3 143 63.6
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 4.9e-07 58.9 131 71.0
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 4.9e-07 58.9 141 70.9
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 6.4e-07 58.5 125 68.8
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 8.3e-07 58.2 140 63.6
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 8.3e-07 58.2 117 67.5
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 8.3e-07 58.2 140 71.4
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 8.3e-07 58.2 133 75.9
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 1.1e-06 57.8 121 80.2
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 1.1e-06 57.8 130 61.5
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.1e-06 57.8 120 69.2
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 1.4e-06 57.4 124 67.7
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.4e-06 57.4 130 70.0
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 1.4e-06 57.4 129 65.1
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 1.4e-06 57.4 132 65.9
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 2.4e-06 56.6 114 64.0
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.4e-06 56.6 142 63.4
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 3.2e-06 56.2 121 79.3
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 3.2e-06 56.2 140 63.6
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 3.2e-06 56.2 127 68.5
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 3.2e-06 56.2 124 71.0
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 4.1e-06 55.8 125 65.6
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 4.1e-06 55.8 124 66.1
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 4.1e-06 55.8 142 60.6
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 5.4e-06 55.5 134 58.2
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 5.4e-06 55.5 141 67.4
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 7.0e-06 55.1 121 79.3
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 9.2e-06 54.7 136 61.8


User provided reference genes

Program Settings