Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4242 Trifolium pratense HOM05D008160 ORTHO05D009635 1.2e-65 253.1 134 100.0
Ca_01599_v3 Cicer arietinum L. HOM05D008160 ORTHO05D009635 2.0e-39 166.0 134 70.1
Medtr2g088370 Medicago truncatula HOM05D008160 ORTHO05D009635 1.4e-32 143.3 137 63.5
LjContig00412g0003580 Lotus japonicus HOM05D008160 ORTHO05D009635 1.6e-25 119.8 142 54.9
Glyma.13G308600 Glycine max HOM05D008160 ORTHO05D009635 5.2e-24 114.8 134 56.0
Glyma.12G193900 Glycine max HOM05D008160 ORTHO05D009635 1.2e-20 103.6 134 51.5
Glyma.12G099100 Glycine max HOM05D008160 ORTHO05D009635 2.0e-15 86.3 146 44.5
Psat7g157360 Pisum sativum HOM05D008160 ORTHO05D009635 2.6e-15 85.9 147 43.5
TPR.G4649 Trifolium pratense HOM05D008160 ORTHO05D009635 1.3e-14 83.6 146 43.2
Glyma.06G305400 Glycine max HOM05D008160 ORTHO05D009635 2.9e-14 82.4 149 43.6
Medtr4g048060 Medicago truncatula HOM05D008160 ORTHO05D009635 4.9e-14 81.6 150 44.7
Lj3g0006762 Lotus japonicus HOM05D008160 ORTHO05D009635 1.9e-13 79.7 149 42.3
MD09G1108700 Malus domestica HOM05D008160 ORTHO05D009635 2.7e-12 75.9 147 41.5
Phvul.011G104000 Phaseolus vulgaris HOM05D008160 ORTHO05D009635 4.6e-12 75.1 141 39.0
Manes.12G074700 Manihot esculenta HOM05D008160 ORTHO05D009635 1.3e-11 73.6 132 40.2
Ca_26933_v3 Cicer arietinum L. HOM05D008160 ORTHO05D009635 3.0e-11 72.4 140 43.6
arahy.Tifrunner.gnm1.ann1.MX58RG Arachis hypogaea HOM05D008160 ORTHO05D009635 8.6e-11 70.9 93 48.4
Lalb_Chr19g0135851 Lupinus albus HOM05D008160 ORTHO05D009635 8.6e-11 70.9 150 37.3
Dinv05432 Davidia involucrata HOM05D008160 ORTHO05D009635 1.5e-10 70.1 129 38.8
TWI75G1754 Tripterygium wilfordii HOM05D008160 ORTHO05D009635 1.5e-10 70.1 136 37.5
TWI36G0727 Tripterygium wilfordii HOM05D008160 ORTHO05D009635 4.3e-10 68.6 134 38.8
Hma1.2p1_0328F.1_g126920 Hydrangea macrophylla HOM05D008160 ORTHO05D009635 7.3e-10 67.8 75 52.0
Prupe.3G217400 Prunus persica HOM05D008160 ORTHO05D009635 7.3e-10 67.8 143 40.6
QL06p012138 Quercus lobata HOM05D008160 ORTHO05D009635 9.6e-10 67.4 150 33.3
QL08p033125 Quercus lobata HOM05D008160 ORTHO05D009635 9.6e-10 67.4 150 33.3
ClCG02G008690 Citrullus lanatus HOM05D008160 ORTHO05D009635 2.1e-09 66.2 145 33.8
Cfa014402 Carpinus fangiana HOM05D008160 ORTHO05D009635 2.8e-09 65.9 106 43.4
Gohir.D13G088500 Gossypium hirsutum HOM05D008160 ORTHO05D009635 2.8e-09 65.9 136 34.6
CiPaw.03G160200 Carya illinoinensis HOM05D008160 ORTHO05D009635 6.2e-09 64.7 147 35.4
TAR624G1256 Trochodendron aralioides HOM05D008160 ORTHO05D009635 8.1e-09 64.3 144 35.4
Haze_12867 Corylus avellana HOM05D008160 ORTHO05D009635 1.4e-08 63.5 97 42.3
Thecc.02G314100 Theobroma cacao HOM05D008160 ORTHO05D009635 1.4e-08 63.5 150 33.3
CANSAT64G2131 Cannabis sativa HOM05D008160 ORTHO05D009635 1.8e-08 63.2 161 35.4
VMungo1127G0429 Vigna mungo HOM05D008160 ORTHO05D009635 2.4e-08 62.8 143 33.6
Gorai.013G101200 Gossypium raimondii HOM05D008160 ORTHO05D009635 4.0e-08 62.0 130 33.1
Gohir.D02G133900 Gossypium hirsutum HOM05D008160 ORTHO05D009635 5.2e-08 61.6 93 38.7
Gorai.005G149800 Gossypium raimondii HOM05D008160 ORTHO05D009635 5.2e-08 61.6 93 38.7
Lalb_Chr03g0028751 Lupinus albus HOM05D008160 ORTHO05D009635 6.8e-08 61.2 131 38.9
Gohir.A03G108800 Gossypium hirsutum HOM05D008160 ORTHO05D009635 1.2e-07 60.5 93 37.6
MELO3C019266.2 Cucumis melo HOM05D008160 ORTHO05D009635 1.5e-07 60.1 94 39.4
Eucgr.A01130 Eucalyptus grandis HOM05D008160 ORTHO05D009635 1.5e-07 60.1 140 33.6
FvH4_6g43200 Fragaria vesca HOM05D008160 ORTHO05D009635 2.6e-07 59.3 147 39.5
FAN02G3260 Fragaria x ananassa HOM05D008160 ORTHO05D009635 2.6e-07 59.3 146 39.0
Gohir.A13G094500 Gossypium hirsutum HOM05D008160 ORTHO05D009635 2.6e-07 59.3 136 33.8
FAN09G3148 Fragaria x ananassa HOM05D008160 ORTHO05D009635 5.8e-07 58.2 146 38.4
COL.COLO4_27706 Corchorus olitorius HOM05D008160 ORTHO05D009635 1.7e-06 56.6 149 33.6
Sabra02G0175400 Salix brachista HOM05D008160 ORTHO05D009635 1.7e-06 56.6 150 32.0
RcHm_v2.0_Chr2g0159311 Rosa chinensis HOM05D008160 ORTHO05D009635 6.4e-06 54.7 145 35.9
TAR626G0785 Trochodendron aralioides HOM05D008160 ORTHO05D009635 6.4e-06 54.7 143 32.2
RcHm_v2.0_Chr2g0159421 Rosa chinensis HOM05D008160 ORTHO05D009635 8.4e-06 54.3 145 35.9


User provided reference genes

Program Settings