Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4224 Trifolium pratense HOM05D008514 ORTHO05D010490 2.1e-49 198.7 100 100.0
Psat5g259960 Pisum sativum HOM05D008514 ORTHO05D010490 7.3e-31 137.1 107 70.1
Psat5g260000 Pisum sativum HOM05D008514 ORTHO05D010490 6.2e-30 134.0 107 68.2
Glyma.12G187800 Glycine max HOM05D008514 ORTHO05D010490 1.1e-23 113.2 108 61.1
Lalb_Chr24g0393401 Lupinus albus HOM05D008514 ORTHO05D010490 5.6e-23 110.9 107 65.4
Phvul.005G120600 Phaseolus vulgaris HOM05D008514 ORTHO05D010490 8.1e-22 107.1 106 60.4
Glyma.13G313400 Glycine max HOM05D008514 ORTHO05D010490 1.8e-21 105.9 108 57.4
VMungo1080G0611 Vigna mungo HOM05D008514 ORTHO05D010490 3.1e-21 105.1 106 59.4
arahy.Tifrunner.gnm1.ann1.14V2F6 Arachis hypogaea HOM05D008514 ORTHO05D010490 4.6e-17 91.3 112 53.6
Medtr2g087180 Medicago truncatula HOM05D008514 ORTHO05D010490 1.8e-16 89.4 91 58.2
VMungo0507G0001 Vigna mungo HOM05D008514 ORTHO05D010490 6.7e-16 87.4 106 50.9
arahy.Tifrunner.gnm1.ann1.UQY7KW Arachis hypogaea HOM05D008514 ORTHO05D010490 8.1e-14 80.5 143 42.0
Lj3g0020405 Lotus japonicus HOM05D008514 ORTHO05D010490 2.4e-13 79.0 110 51.8
Haze_23309 Corylus avellana HOM05D008514 ORTHO05D010490 5.3e-13 77.8 107 44.9
CiPaw.14G094900 Carya illinoinensis HOM05D008514 ORTHO05D010490 1.7e-11 72.8 108 48.1
TPR.G33036 Trifolium pratense HOM05D008514 ORTHO05D413081 6.5e-11 70.9 90 50.0
Actinidia37064 Actinidia chinensis HOM05D008514 ORTHO05D010490 1.4e-10 69.7 91 48.4
Potri.001G217500 Populus trichocarpa HOM05D008514 ORTHO05D010490 3.2e-10 68.6 100 43.0
Potri.009G020300 Populus trichocarpa HOM05D008514 ORTHO05D010490 7.1e-10 67.4 102 44.1
Sabra09G0012000 Salix brachista HOM05D008514 ORTHO05D010490 7.1e-10 67.4 100 45.0
TAR623G0293 Trochodendron aralioides HOM05D008514 ORTHO05D010490 2.7e-09 65.5 100 43.0
Actinidia35477 Actinidia chinensis HOM05D008514 ORTHO05D010490 3.5e-09 65.1 91 45.1
QL01p011158 Quercus lobata HOM05D008514 ORTHO05D010490 1.8e-08 62.8 97 44.3
Cfa009942 Carpinus fangiana HOM05D008514 ORTHO05D010490 3.0e-08 62.0 123 37.4
Manes.11G165600 Manihot esculenta HOM05D008514 ORTHO05D010490 1.1e-07 60.1 96 43.8
Nn2g14299 Nelumbo nucifera HOM05D008514 ORTHO05D010490 1.9e-07 59.3 102 39.2
Thecc.09G274000 Theobroma cacao HOM05D008514 ORTHO05D010490 1.9e-07 59.3 93 44.1
Dinv17092 Davidia involucrata HOM05D002527 ORTHO05D002865 3.3e-07 58.5 77 46.8
QL01p020143 Quercus lobata HOM05D008514 ORTHO05D010490 4.3e-07 58.2 78 46.2
COL.COLO4_10193 Corchorus olitorius HOM05D008514 ORTHO05D010490 7.4e-07 57.4 103 37.9
Sabra16G0126400 Salix brachista HOM05D008514 ORTHO05D010490 7.4e-07 57.4 108 40.7
Duzib170G0491 Durio zibethinus HOM05D008514 ORTHO05D010490 9.6e-07 57.0 98 37.8
Nn6g34697 Nelumbo nucifera HOM05D008514 ORTHO05D010490 1.6e-06 56.2 94 38.3
Gohir.A09G098550 Gossypium hirsutum HOM05D008514 ORTHO05D010490 4.8e-06 54.7 95 40.0


User provided reference genes

Program Settings