Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G419 Trifolium pratense HOM05D008030 ORTHO05D003385 7.6e-74 280.4 142 100.0
TPR.G13019 Trifolium pratense HOM05D008030 ORTHO05D003385 4.0e-67 258.1 166 82.5
Lalb_Chr07g0195621 Lupinus albus HOM05D008030 ORTHO05D003385 1.1e-27 127.1 147 50.3
Phvul.005G062900 Phaseolus vulgaris HOM05D008030 ORTHO05D003385 5.9e-26 121.3 148 50.7
Glyma.13G261600 Glycine max HOM05D008030 ORTHO05D003385 8.5e-25 117.5 150 47.3
Lj2g0000635 Lotus japonicus HOM05D008030 ORTHO05D003385 5.5e-24 114.8 144 48.6
Lj2g0019664 Lotus japonicus HOM05D008030 ORTHO05D003385 3.6e-23 112.1 144 47.2
Psat7g125760 Pisum sativum HOM05D008030 ORTHO05D003385 3.0e-22 109.0 139 46.0
Lj2g0007297 Lotus japonicus HOM05D008030 ORTHO05D003385 2.0e-21 106.3 144 46.5
Lj3g0008935 Lotus japonicus HOM05D008030 ORTHO05D003385 5.7e-21 104.8 145 49.0
Lj2g0012796 Lotus japonicus HOM05D008030 ORTHO05D003385 1.7e-20 103.2 144 45.1
Lj2g0016556 Lotus japonicus HOM05D008030 ORTHO05D003385 1.7e-20 103.2 144 45.8
Lj3g0017982 Lotus japonicus HOM05D008030 ORTHO05D003385 1.7e-20 103.2 146 49.3
Duzib213G0250 Durio zibethinus HOM05D008030 ORTHO05D003385 8.3e-20 100.9 152 39.5
COL.COLO4_17439 Corchorus olitorius HOM05D008030 ORTHO05D003385 5.4e-19 98.2 143 44.8
Phvul.011G155500 Phaseolus vulgaris HOM05D008030 ORTHO05D003385 1.2e-18 97.1 143 44.8
Thecc.07G141300 Theobroma cacao HOM05D008030 ORTHO05D003385 2.0e-18 96.3 154 37.0
Thecc.07G141500 Theobroma cacao HOM05D008030 ORTHO05D003385 2.0e-18 96.3 155 36.8
Gohir.D13G155800 Gossypium hirsutum HOM05D008030 ORTHO05D003385 2.3e-17 92.8 152 38.8
Gohir.A13G151450 Gossypium hirsutum HOM05D008030 ORTHO05D003385 6.5e-17 91.3 152 38.8
Gorai.013G176400 Gossypium raimondii HOM05D008030 ORTHO05D003385 1.5e-16 90.1 152 37.5
TPR.G5623 Trifolium pratense HOM05D008030 ORTHO05D003385 3.3e-16 89.0 142 42.3
arahy.Tifrunner.gnm1.ann1.ELAP2P Arachis hypogaea HOM05D008030 ORTHO05D003385 2.8e-15 85.9 153 41.2
arahy.Tifrunner.gnm1.ann1.GELT5I Arachis hypogaea HOM05D008030 ORTHO05D003385 2.8e-15 85.9 153 41.2
Thecc.07G141000 Theobroma cacao HOM05D008030 ORTHO05D003385 3.6e-15 85.5 153 34.0
Gohir.D05G336200 Gossypium hirsutum HOM05D008030 ORTHO05D003385 1.8e-14 83.2 151 36.4
arahy.Tifrunner.gnm1.ann1.PN3N4M Arachis hypogaea HOM05D008030 ORTHO05D003385 2.3e-14 82.8 153 39.2
Gorai.007G054300 Gossypium raimondii HOM05D008030 ORTHO05D003385 1.5e-13 80.1 152 38.2
Gorai.009G360200 Gossypium raimondii HOM05D008030 ORTHO05D003385 1.5e-13 80.1 152 38.2
Gohir.D05G336320 Gossypium hirsutum HOM05D008030 ORTHO05D003385 5.7e-13 78.2 154 39.0
Lj2g0001631 Lotus japonicus HOM05D008030 ORTHO05D003385 2.2e-12 76.3 145 37.2
Lj3g0001069 Lotus japonicus HOM05D008030 ORTHO05D003385 3.7e-12 75.5 77 58.4
Lj1g0007560 Lotus japonicus HOM05D008030 ORTHO05D003385 6.3e-12 74.7 145 36.6
Lj1g0028078 Lotus japonicus HOM05D008030 ORTHO05D003385 8.3e-12 74.3 144 37.5
Medtr4g085730 Medicago truncatula HOM05D008030 ORTHO05D003385 8.3e-12 74.3 88 52.3
Gohir.A04G046233 Gossypium hirsutum HOM05D008030 ORTHO05D003385 1.1e-11 73.9 148 33.1
Gohir.A04G046266 Gossypium hirsutum HOM05D008030 ORTHO05D003385 1.1e-11 73.9 148 33.1
Medtr4g085500 Medicago truncatula HOM05D008030 ORTHO05D003385 1.1e-11 73.9 82 50.0
Gohir.A07G155684 Gossypium hirsutum HOM05D008030 ORTHO05D003385 1.4e-11 73.6 148 33.1
Gohir.D05G336240 Gossypium hirsutum HOM05D008030 ORTHO05D003385 1.4e-11 73.6 148 33.1
Gohir.D05G336340 Gossypium hirsutum HOM05D008030 ORTHO05D003385 1.4e-11 73.6 148 33.1
Gorai.009G360100 Gossypium raimondii HOM05D008030 ORTHO05D003385 1.4e-11 73.6 148 33.1
Gohir.D05G336280 Gossypium hirsutum HOM05D008030 ORTHO05D003385 2.4e-11 72.8 148 33.1
Lj3g0019753 Lotus japonicus HOM05D008030 ORTHO05D003385 4.1e-11 72.0 87 51.7
Potri.011G098700 Populus trichocarpa HOM05D008030 ORTHO05D003385 7.0e-11 71.2 140 40.0
DCAR_011016 Daucus carota HOM05D008030 ORTHO05D003385 1.2e-10 70.5 127 34.6
TAR629G0835 Trochodendron aralioides HOM05D008030 ORTHO05D003385 3.5e-10 68.9 134 35.1
TAR629G1159 Trochodendron aralioides HOM05D008030 ORTHO05D003385 3.5e-10 68.9 134 35.8
Gohir.A04G046200 Gossypium hirsutum HOM05D008030 ORTHO05D003385 1.1e-08 63.9 126 37.3
Gohir.A04G046300 Gossypium hirsutum HOM05D008030 ORTHO05D003385 1.1e-08 63.9 126 37.3
Glyma.08G168500 Glycine max HOM05D008030 ORTHO05D003385 5.6e-08 61.6 162 31.5
Glyma.13G283500 Glycine max HOM05D008030 ORTHO05D003385 1.6e-07 60.1 139 36.0
Psat1g006400 Pisum sativum HOM05D008030 ORTHO05D003385 6.1e-07 58.2 147 32.7
Medtr6g034190 Medicago truncatula HOM05D008030 ORTHO05D003385 8.0e-07 57.8 153 33.3
Medtr2g071720 Medicago truncatula HOM05D008030 ORTHO05D003385 2.3e-06 56.2 159 32.7
Medtr4g076170 Medicago truncatula HOM05D008030 ORTHO05D003385 3.0e-06 55.8 57 50.9
Rhsim06G0187200 Rhododendron simsii HOM05D008030 ORTHO05D003385 4.0e-06 55.5 140 32.9


User provided reference genes

Program Settings