Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 5.5e-65 250.8 121 100.0
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 1.0e-58 229.9 121 90.9
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 5.5e-57 224.2 121 88.4
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 1.2e-56 223.0 121 86.8
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 6.1e-56 220.7 120 85.8
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 5.2e-55 217.6 121 86.8
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 5.7e-54 214.2 116 86.2
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 2.0e-51 205.7 121 81.0
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 3.5e-51 204.9 121 80.2
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 1.0e-50 203.4 119 80.7
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 1.0e-50 203.4 121 81.0
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 5.0e-50 201.1 119 79.0
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.1e-49 199.9 119 79.0
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 3.2e-49 198.4 117 80.3
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 4.2e-49 198.0 117 80.3
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 1.2e-48 196.4 117 76.1
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 2.7e-48 195.3 118 76.3
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 2.7e-48 195.3 119 77.3
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 4.7e-48 194.5 118 75.4
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 6.1e-48 194.1 119 75.6
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 8.0e-48 193.7 120 75.0
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 1.4e-47 193.0 119 74.8
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.3e-47 192.2 119 75.6
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 2.3e-47 192.2 119 73.9
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 3.0e-47 191.8 118 75.4
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 5.2e-47 191.0 115 72.2
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 1.5e-46 189.5 119 75.6
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 1.5e-46 189.5 119 76.5
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.0e-46 189.1 119 75.6
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 2.0e-46 189.1 119 74.8
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 2.6e-46 188.7 119 75.6
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 4.4e-46 188.0 119 73.9
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 4.4e-46 188.0 121 71.9
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 7.5e-46 187.2 119 73.1
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.7e-45 186.0 119 73.9
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 2.2e-45 185.7 119 73.1
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 3.7e-45 184.9 119 71.4
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 4.8e-45 184.5 117 76.1
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 4.8e-45 184.5 117 70.1
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 4.8e-45 184.5 108 80.6
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 6.3e-45 184.1 115 70.4
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 8.3e-45 183.7 117 67.5
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 1.1e-44 183.3 115 70.4
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.1e-44 183.3 117 69.2
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 1.4e-44 183.0 115 70.4
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 1.4e-44 183.0 119 72.3
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.4e-44 183.0 117 67.5
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 1.8e-44 182.6 119 71.4
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 1.8e-44 182.6 119 68.9
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 1.8e-44 182.6 117 70.9
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 2.4e-44 182.2 119 71.4
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 3.1e-44 181.8 115 69.6
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 5.4e-44 181.0 117 68.4
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 5.4e-44 181.0 117 68.4
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 5.4e-44 181.0 117 68.4
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 5.4e-44 181.0 117 68.4
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 5.4e-44 181.0 119 70.6
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 5.4e-44 181.0 119 73.1
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 9.1e-44 180.3 115 67.8
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 1.2e-43 179.9 120 67.5
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 2.0e-43 179.1 108 78.7
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 4.5e-43 177.9 119 67.2
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 1.3e-42 176.4 119 71.4
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 1.3e-42 176.4 117 70.1
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 2.9e-42 175.3 117 64.1
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 2.9e-42 175.3 119 68.1
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.8e-42 174.9 146 62.3
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 5.0e-42 174.5 122 69.7
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 2.5e-41 172.2 117 66.7
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 3.2e-41 171.8 120 68.3
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 5.5e-41 171.0 140 59.3
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.1e-40 169.1 117 65.8
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 4.7e-40 167.9 119 65.5
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 3.0e-39 165.2 108 72.2
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 6.8e-39 164.1 123 67.5
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.5e-38 162.9 100 75.0
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 6.3e-37 157.5 101 69.3
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.2e-35 153.3 94 75.5
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 4.5e-35 151.4 116 61.2
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 1.3e-34 149.8 119 61.3
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 8.6e-34 147.1 114 64.0
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 1.9e-33 146.0 119 62.2
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.6e-30 135.6 117 56.4
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 3.2e-28 128.6 77 75.3
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.2e-27 126.7 80 75.0
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 2.0e-27 125.9 80 76.2
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 3.6e-24 115.2 109 49.5
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 2.3e-23 112.5 80 68.8
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 1.2e-22 110.2 110 47.3
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 6.4e-21 104.4 79 69.6
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 6.0e-19 97.8 59 74.6
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 1.0e-18 97.1 115 45.2
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 8.9e-15 84.0 86 51.2
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 1.9e-12 76.3 101 41.6
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 3.3e-09 65.5 40 72.5
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 1.6e-08 63.2 92 41.3


User provided reference genes

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