Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40835 Trifolium pratense HOM05D004589 ORTHO05D005848 2.0e-234 815.5 423 100.0
Medtr1g012980 Medicago truncatula HOM05D004589 ORTHO05D005848 6.3e-225 783.9 424 94.3
Psat6g028520 Pisum sativum HOM05D004589 ORTHO05D005848 6.3e-225 783.9 424 94.6
Ca_13043_v3 Cicer arietinum L. HOM05D004589 ORTHO05D005848 4.5e-223 777.7 424 93.9
Lj5g0022357 Lotus japonicus HOM05D004589 ORTHO05D005848 8.8e-219 763.5 424 91.3
Glyma.14G112200 Glycine max HOM05D004589 ORTHO05D005848 2.8e-217 758.4 424 90.3
Glyma.17G215700 Glycine max HOM05D004589 ORTHO05D005848 4.8e-217 757.7 424 90.3
Phvul.001G047300 Phaseolus vulgaris HOM05D004589 ORTHO05D005848 1.5e-213 746.1 424 88.9
VMungo0647G1846 Vigna mungo HOM05D004589 ORTHO05D005848 3.2e-213 745.0 424 88.7
Lalb_Chr11g0075481 Lupinus albus HOM05D004589 ORTHO05D005848 3.6e-212 741.5 424 88.9
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea HOM05D004589 ORTHO05D005848 2.7e-207 725.3 424 87.7
arahy.Tifrunner.gnm1.ann1.JQP3NY Arachis hypogaea HOM05D004589 ORTHO05D005848 3.5e-207 724.9 424 87.7
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 6.8e-203 710.7 424 84.2
CiPaw.08G008300 Carya illinoinensis HOM05D004589 ORTHO05D005848 5.7e-202 707.6 424 84.2
Thecc.09G019500 Theobroma cacao HOM05D004589 ORTHO05D005848 7.5e-202 707.2 424 83.7
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 1.3e-201 706.4 424 83.5
TWI63G0229 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 1.3e-201 706.4 424 84.2
Duzib150G1268 Durio zibethinus HOM05D004589 ORTHO05D005848 2.9e-201 705.3 424 83.7
ClCG05G016580 Citrullus lanatus HOM05D004589 ORTHO05D005848 4.9e-201 704.5 424 82.5
COL.COLO4_18916 Corchorus olitorius HOM05D004589 ORTHO05D005848 6.4e-201 704.1 424 83.3
MD15G1131100 Malus domestica HOM05D004589 ORTHO05D005848 6.4e-201 704.1 424 83.5
Hma1.2p1_0167F.1_g073640 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 7.0e-200 700.7 424 83.3
Ciclev10007276m.g Citrus clementina HOM05D004589 ORTHO05D005848 1.6e-199 699.5 427 83.6
Haze_21457 Corylus avellana HOM05D004589 ORTHO05D005848 2.7e-199 698.7 424 83.3
Gohir.A07G030400 Gossypium hirsutum HOM05D004589 ORTHO05D005848 2.7e-199 698.7 424 83.0
Manes.03G011700 Manihot esculenta HOM05D004589 ORTHO05D005848 2.7e-199 698.7 424 82.5
Gohir.D07G034300 Gossypium hirsutum HOM05D004589 ORTHO05D005848 5.9e-199 697.6 424 83.3
Gorai.001G035900 Gossypium raimondii HOM05D004589 ORTHO05D005848 5.9e-199 697.6 424 83.3
FAN20G1713 Fragaria x ananassa HOM05D004589 ORTHO05D005848 7.8e-199 697.2 424 82.3
Cfa013100 Carpinus fangiana HOM05D004589 ORTHO05D005848 1.0e-198 696.8 424 83.0
FvH4_2g28290 Fragaria vesca HOM05D004589 ORTHO05D005848 1.0e-198 696.8 424 82.3
RcHm_v2.0_Chr6g0297201 Rosa chinensis HOM05D004589 ORTHO05D005848 2.3e-198 695.7 424 82.5
MELO3C016987.2 Cucumis melo HOM05D004589 ORTHO05D005848 8.6e-198 693.7 424 81.4
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 1.1e-197 693.3 424 82.1
GSVIVG01035919001 Vitis vinifera HOM05D004589 ORTHO05D005848 1.1e-197 693.3 424 83.3
Oeu056766.2 Olea europaea HOM05D004589 ORTHO05D005848 3.3e-197 691.8 424 82.3
Sed0004204 Sechium edule HOM05D004589 ORTHO05D005848 4.3e-197 691.4 424 81.1
RhsimUnG0052600 Rhododendron simsii HOM05D004589 ORTHO05D005848 1.2e-196 689.9 455 77.1
RhsimUnG0165300 Rhododendron simsii HOM05D004589 ORTHO05D005848 1.2e-196 689.9 455 77.1
Prupe.1G486400 Prunus persica HOM05D004589 ORTHO05D005848 2.8e-196 688.7 424 81.8
Atru.chr7.2502 Acer truncatum HOM05D004589 ORTHO05D005848 1.8e-195 686.0 424 81.6
CsaV3_4G036860 Cucumis sativus L. HOM05D004589 ORTHO05D005848 2.3e-195 685.6 424 80.7
FAN24G2656 Fragaria x ananassa HOM05D004589 ORTHO05D005848 5.2e-195 684.5 440 79.1
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 8.9e-195 683.7 424 80.9
Potri.018G022500 Populus trichocarpa HOM05D004589 ORTHO05D005848 1.5e-194 682.9 424 80.7
HanXRQChr16g0511131 Helianthus annuus HOM05D004589 ORTHO05D005848 7.5e-194 680.6 424 79.5
Peaxi162Scf00430g00220 Petunia axillaris HOM05D004589 ORTHO05D005848 7.5e-194 680.6 424 81.6
Potri.006G259500 Populus trichocarpa HOM05D004589 ORTHO05D005848 1.3e-193 679.9 424 80.9
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 1.3e-193 679.9 450 77.6
FAN15G2875 Fragaria x ananassa HOM05D004589 ORTHO05D005848 2.2e-193 679.1 440 78.6
Gohir.A06G100000 Gossypium hirsutum HOM05D004589 ORTHO05D005848 3.7e-193 678.3 424 80.4
Eucgr.C02726 Eucalyptus grandis HOM05D004589 ORTHO05D005848 4.9e-193 677.9 424 80.0
Gorai.010G117200 Gossypium raimondii HOM05D004589 ORTHO05D005848 6.4e-193 677.6 424 80.4
Nn2g12251 Nelumbo nucifera HOM05D004589 ORTHO05D005848 6.4e-193 677.6 424 80.4
FAN27G1181 Fragaria x ananassa HOM05D004589 ORTHO05D005848 4.1e-192 674.9 440 78.4
CAN.G199.72 Capsicum annuum HOM05D004589 ORTHO05D005848 1.2e-191 673.3 424 80.9
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 4.6e-191 671.4 424 80.7
Lj8A732G29 Lonicera japonica HOM05D004589 ORTHO05D005848 4.6e-191 671.4 418 82.3
Sc23g0006530 Simmondsia chinensis HOM05D004589 ORTHO05D005848 6.0e-191 671.0 424 79.2
PGR044G0530 Punica granatum HOM05D004589 ORTHO05D005848 2.3e-190 669.1 424 79.5
ECA246G2532 Erigeron canadensis HOM05D004589 ORTHO05D005848 5.0e-190 667.9 424 77.8
Cc08_g00190 Coffea canephora HOM05D004589 ORTHO05D005848 6.6e-190 667.5 424 80.0
Solyc06g065840.3 Solanum lycopersicum HOM05D004589 ORTHO05D005848 1.9e-189 666.0 424 79.7
Sopen06g024330 Solanum pennellii HOM05D004589 ORTHO05D005848 2.5e-189 665.6 424 79.7
Sp6g32450 Schrenkiella parvula HOM05D004589 ORTHO05D005848 4.3e-189 664.8 424 78.5
Nitab4.5_0003811g0060 Nicotiana tabacum HOM05D004589 ORTHO05D005848 7.3e-189 664.1 442 77.8
Carub.0006s0955 Capsella rubella HOM05D004589 ORTHO05D005848 9.5e-189 663.7 424 78.3
Thhalv10012483m.g Eutrema salsugineum HOM05D004589 ORTHO05D005848 1.2e-188 663.3 424 78.5
Nitab4.5_0002503g0050 Nicotiana tabacum HOM05D004589 ORTHO05D005848 1.2e-188 663.3 442 77.6
A10p26640 Brassica napus HOM05D004589 ORTHO05D005848 2.8e-188 662.1 424 78.3
Aa31LG3G16090 Aethionema arabicum HOM05D004589 ORTHO05D005848 4.7e-188 661.4 424 77.6
AL6G21660 Arabidopsis lyrata HOM05D004589 ORTHO05D005848 4.7e-188 661.4 424 78.3
MSTRG.1735 Avicennia marina HOM05D004589 ORTHO05D005848 6.2e-188 661.0 424 78.3
C09p65810 Brassica napus HOM05D004589 ORTHO05D005848 6.2e-188 661.0 424 78.3
BolC9t59402H Brassica oleracea HOM05D004589 ORTHO05D005848 6.2e-188 661.0 424 78.3
Hund04463 Selenicereus undatus HOM05D004589 ORTHO05D005848 8.1e-188 660.6 424 78.8
BraA10t44722Z Brassica rapa HOM05D004589 ORTHO05D005848 1.8e-187 659.4 424 77.8
PSO210G3160 Papaver somniferum HOM05D004589 ORTHO05D005848 1.8e-187 659.4 424 77.6
CARHR202250 Cardamine hirsuta HOM05D004589 ORTHO05D005848 3.1e-187 658.7 424 77.6
Lsat_1_v5_gn_6_115440 Lactuca sativa HOM05D004589 ORTHO05D005848 4.0e-187 658.3 426 77.9
THA.LOC104799036 Tarenaya hassleriana HOM05D004589 ORTHO05D005848 8.9e-187 657.1 424 78.3
AT5G11040 Arabidopsis thaliana HOM05D004589 ORTHO05D005848 1.2e-186 656.8 424 77.8
EL10Ac2g04152 Beta vulgaris HOM05D004589 ORTHO05D005848 6.4e-185 651.0 424 78.1
CANSAT11G1771 Cannabis sativa HOM05D004589 ORTHO05D005848 1.9e-184 649.4 424 79.0
Migut.E01823 Erythranthe guttata HOM05D004589 ORTHO05D005848 2.1e-183 646.0 424 76.2
AUR62031571 Chenopodium quinoa HOM05D004589 ORTHO05D005848 3.5e-183 645.2 424 77.8
Ah.16g104820 Amaranthus hybridus HOM05D004589 ORTHO05D005848 3.9e-182 641.7 424 77.8
ATR0629G049 Amborella trichopoda HOM05D004589 ORTHO05D005848 3.9e-182 641.7 424 75.7
AUR62012448 Chenopodium quinoa HOM05D004589 ORTHO05D005848 3.9e-182 641.7 424 77.1
SGA_v2.0_scaffold85G26586 Striga asiatica HOM05D004589 ORTHO05D005848 3.9e-182 641.7 423 77.5
Nn8g39722 Nelumbo nucifera HOM05D004589 ORTHO05D005848 8.1e-180 634.0 424 76.4
Lsat_1_v5_gn_1_43861 Lactuca sativa HOM05D004589 ORTHO05D005848 3.1e-179 632.1 424 74.8
Manes.16G126200 Manihot esculenta HOM05D004589 ORTHO05D005848 1.9e-176 622.9 424 75.0
CDE05G2463 Ceratophyllum demersum HOM05D004589 ORTHO05D005848 1.6e-175 619.8 424 73.3
Zm00001eb078140 Zea mays HOM05D004589 ORTHO05D005848 1.0e-174 617.1 425 72.2
unitig_32.g11112 Utricularia gibba HOM05D004589 ORTHO05D005848 3.0e-174 615.5 424 71.9
Gohir.D06G102200 Gossypium hirsutum HOM05D004589 ORTHO05D005848 8.7e-174 614.0 424 75.0
HanXRQChr01g0030641 Helianthus annuus HOM05D004589 ORTHO05D005848 1.9e-173 612.8 424 71.0
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 7.3e-173 610.9 424 71.7
Os04g0502200 Oryza sativa ssp. japonica HOM05D004589 ORTHO05D005848 1.7e-169 599.7 425 70.6
TAR383G0245 Trochodendron aralioides HOM05D004589 ORTHO05D005848 1.3e-166 590.1 369 80.2
BcaC04g19264 Brassica carinata HOM05D004589 ORTHO05D005848 6.9e-163 577.8 424 71.2
DCAR_021911 Daucus carota HOM05D004589 ORTHO05D005848 4.5e-162 575.1 452 67.7
HPP92_020312 Vanilla planifolia HOM05D004589 ORTHO05D005848 6.7e-150 534.6 423 65.2
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 6.7e-134 481.5 426 57.7
Mapoly0001s0490 Marchantia polymorpha HOM05D004589 ORTHO05D005848 6.1e-127 458.4 428 52.8
arahy.Tifrunner.gnm1.ann1.3DY4JU Arachis hypogaea HOM05D004589 ORTHO05D005848 2.1e-111 406.8 299 71.9
arahy.Tifrunner.gnm1.ann1.X695T9 Arachis hypogaea HOM05D004589 ORTHO05D005848 5.9e-106 388.7 289 72.3
Pp3c22_21520 Physcomitrium patens HOM05D004589 ORTHO05D005848 1.0e-105 387.9 424 47.6
Pp3c19_10170 Physcomitrium patens HOM05D004589 ORTHO05D005848 2.9e-105 386.3 424 48.6
SMO364G0672 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 2.9e-105 386.3 425 47.3
SMO199G0047 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 9.8e-93 344.7 441 44.7
CBR_g36903 Chara braunii HOM05D004589 ORTHO05D005848 9.2e-91 338.2 453 42.6
Actinidia14103 Actinidia chinensis HOM05D004589 ORTHO05D005848 4.0e-86 322.8 205 83.9
SEGI_21363 Sequoiadendron giganteum HOM05D004589 ORTHO05D005848 1.7e-76 290.8 288 54.2
SMO361G0208 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 1.7e-73 280.8 438 38.8
AagrBONN_evm.TU.Sc2ySwM_368.2737 Anthoceros agrestis HOM05D004589 ORTHO05D005848 1.5e-61 241.1 211 55.0
HPP92_024788 Vanilla planifolia HOM05D004589 ORTHO05D005848 1.2e-45 188.3 109 78.0
Nn2g16054 Nelumbo nucifera HOM05D004589 ORTHO05D005848 3.3e-32 143.7 86 82.6
HPP92_024789 Vanilla planifolia HOM05D004589 ORTHO05D005848 1.4e-22 111.7 83 67.5
Cre07.g316100 Chlamydomonas reinhardtii HOM05D004589 ORTHO05D005848 1.2e-10 72.0 300 25.7
SMO361G0808 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 2.4e-06 57.8 93 36.6


User provided reference genes

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