Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40814 Trifolium pratense HOM05D000980 ORTHO05D000649 3.9e-63 244.6 121 100.0
Psat0s2849g0040 Pisum sativum HOM05D000980 ORTHO05D000649 5.0e-34 147.9 117 65.0
Phvul.004G148900 Phaseolus vulgaris HOM05D000980 ORTHO05D000649 9.5e-25 117.1 110 52.7
Lj2g0001681 Lotus japonicus HOM05D000980 ORTHO05D000649 3.6e-24 115.2 114 52.6
Glyma.07G103800 Glycine max HOM05D000980 ORTHO05D000649 4.7e-24 114.8 114 51.8
Glyma.07G103900 Glycine max HOM05D000980 ORTHO05D000649 6.2e-24 114.4 113 50.4
Lj2g0021480 Lotus japonicus HOM05D000980 ORTHO05D000649 6.2e-24 114.4 113 53.1
Ca_25352_v3 Cicer arietinum L. HOM05D000980 ORTHO05D000649 1.4e-23 113.2 118 50.0
Lj4g0023487 Lotus japonicus HOM05D000980 ORTHO05D000649 2.3e-23 112.5 114 49.1
Glyma.07G103700 Glycine max HOM05D000980 ORTHO05D000649 3.1e-23 112.1 113 50.4
Lalb_Chr24g0398141 Lupinus albus HOM05D000980 ORTHO05D000649 4.0e-23 111.7 114 55.3
VMungo0464G0603 Vigna mungo HOM05D000980 ORTHO05D000649 6.8e-23 110.9 113 49.6
TPR.G30759 Trifolium pratense HOM05D000980 ORTHO05D000649 1.5e-22 109.8 116 54.3
Psat1g030160 Pisum sativum HOM05D000980 ORTHO05D000649 2.0e-22 109.4 122 51.6
Medtr6g070890 Medicago truncatula HOM05D000980 ORTHO05D000649 5.8e-22 107.8 121 52.1
Medtr6g071410 Medicago truncatula HOM05D000980 ORTHO05D000649 5.8e-22 107.8 121 52.1
Medtr6g071710 Medicago truncatula HOM05D000980 ORTHO05D000649 1.7e-21 106.3 117 51.3
Phvul.004G148800 Phaseolus vulgaris HOM05D000980 ORTHO05D000649 1.7e-21 106.3 113 47.8
Lalb_Chr14g0370671 Lupinus albus HOM05D000980 ORTHO05D000649 2.2e-21 105.9 114 49.1
TPR.G30762 Trifolium pratense HOM05D000980 ORTHO05D000649 4.9e-21 104.8 117 49.6
Medtr6g471090 Medicago truncatula HOM05D000980 ORTHO05D000649 1.4e-20 103.2 118 52.5
Medtr6g070900 Medicago truncatula HOM05D000980 ORTHO05D000649 5.4e-20 101.3 117 51.3
Medtr6g071400 Medicago truncatula HOM05D000980 ORTHO05D000649 5.4e-20 101.3 117 51.3
Medtr6g471080 Medicago truncatula HOM05D000980 ORTHO05D000649 1.6e-19 99.8 118 49.2
Lj4g0016694 Lotus japonicus HOM05D000980 ORTHO05D000649 4.6e-19 98.2 113 45.1
Psat0s1622g0080 Pisum sativum HOM05D000980 ORTHO05D000649 1.7e-18 96.3 121 47.9
Medtr2g048270 Medicago truncatula HOM05D000980 ORTHO05D000649 1.2e-16 90.1 106 47.2
VMungo0464G1821 Vigna mungo HOM05D000980 ORTHO05D000649 1.8e-15 86.3 108 43.5
Lj4g0000386 Lotus japonicus HOM05D000980 ORTHO05D000649 1.2e-14 83.6 105 44.8
Psat1g030120 Pisum sativum HOM05D000980 ORTHO05D000649 1.5e-14 83.2 89 51.7
FAN02G0899 Fragaria x ananassa HOM05D000980 ORTHO05D000649 5.1e-10 68.2 110 36.4
FAN09G1510 Fragaria x ananassa HOM05D000980 ORTHO05D000649 5.1e-10 68.2 110 36.4
MD12G1038600 Malus domestica HOM05D000980 ORTHO05D000649 5.1e-10 68.2 111 40.5
FAN05G0258 Fragaria x ananassa HOM05D000980 ORTHO05D000649 1.1e-09 67.0 110 36.4
RcHm_v2.0_Chr3g0475591 Rosa chinensis HOM05D000980 ORTHO05D000649 1.5e-09 66.6 110 35.5
MD14G1037300 Malus domestica HOM05D000980 ORTHO05D000649 3.3e-09 65.5 111 39.6
Psat6g115400 Pisum sativum HOM05D000980 ORTHO05D000649 7.3e-09 64.3 50 62.0
RcHm_v2.0_Chr3g0475631 Rosa chinensis HOM05D000980 ORTHO05D000649 1.6e-08 63.2 110 35.5
RcHm_v2.0_Chr3g0475641 Rosa chinensis HOM05D000980 ORTHO05D000649 2.8e-08 62.4 110 35.5
RcHm_v2.0_Chr3g0475651 Rosa chinensis HOM05D000980 ORTHO05D000649 2.8e-08 62.4 110 35.5
RcHm_v2.0_Chr3g0475661 Rosa chinensis HOM05D000980 ORTHO05D000649 2.8e-08 62.4 110 35.5
Prupe.7G097200 Prunus persica HOM05D000980 ORTHO05D000649 4.7e-08 61.6 111 34.2
TAR633G1869 Trochodendron aralioides HOM05D000980 ORTHO05D000649 1.8e-07 59.7 105 37.1
QL07p038882 Quercus lobata HOM05D000980 ORTHO05D000649 2.3e-07 59.3 110 33.6
TAR633G0806 Trochodendron aralioides HOM05D000980 ORTHO05D000649 2.3e-07 59.3 105 36.2
CiPaw.10G016400 Carya illinoinensis HOM05D000980 ORTHO05D000649 3.1e-07 58.9 109 38.5
THA.LOC104804070 Tarenaya hassleriana HOM05D000980 ORTHO05D000649 3.1e-07 58.9 108 40.7
FAN16G1827 Fragaria x ananassa HOM05D000980 ORTHO05D000649 4.0e-07 58.5 110 32.7
FAN25G0394 Fragaria x ananassa HOM05D000980 ORTHO05D000649 4.0e-07 58.5 110 32.7
FAN14G5784 Fragaria x ananassa HOM05D000980 ORTHO05D000649 5.2e-07 58.2 110 32.7
Cfa016682 Carpinus fangiana HOM05D000980 ORTHO05D000649 6.8e-07 57.8 109 36.7
Duzib106G0118 Durio zibethinus HOM05D000980 ORTHO05D000649 6.8e-07 57.8 99 38.4
Cfa017240 Carpinus fangiana HOM05D000980 ORTHO05D000649 8.9e-07 57.4 116 33.6
Peaxi162Scf00939g00215 Petunia axillaris HOM05D000980 ORTHO05D000649 8.9e-07 57.4 111 35.1
FvH4_6g20140 Fragaria vesca HOM05D000980 ORTHO05D000649 1.2e-06 57.0 110 32.7
QL07p037054 Quercus lobata HOM05D000980 ORTHO05D000649 1.2e-06 57.0 104 34.6
FAN14G1799 Fragaria x ananassa HOM05D000980 ORTHO05D000649 1.5e-06 56.6 110 31.8
Nitab4.5_0001287g0070 Nicotiana tabacum HOM05D000980 ORTHO05D000649 1.5e-06 56.6 108 36.1
Nitab4.5_0003810g0010 Nicotiana tabacum HOM05D000980 ORTHO05D000649 1.5e-06 56.6 111 34.2
MSTRG.19314 Avicennia marina HOM05D000980 ORTHO05D000649 2.0e-06 56.2 105 34.3
CiPaw.10G009200 Carya illinoinensis HOM05D000980 ORTHO05D000649 2.0e-06 56.2 110 33.6
QL07p036994 Quercus lobata HOM05D000980 ORTHO05D000649 2.0e-06 56.2 110 33.6
QL07p039202 Quercus lobata HOM05D000980 ORTHO05D000649 2.0e-06 56.2 110 32.7
Prupe.7G112000 Prunus persica HOM05D000980 ORTHO05D000649 2.6e-06 55.8 109 33.9
Cfa017242 Carpinus fangiana HOM05D000980 ORTHO05D000649 3.4e-06 55.5 109 31.2
Oeu052629.1 Olea europaea HOM05D000980 ORTHO05D000649 4.4e-06 55.1 105 35.2
Potri.006G204300 Populus trichocarpa HOM05D000980 ORTHO05D000649 4.4e-06 55.1 107 32.7
Cfa016683 Carpinus fangiana HOM05D000980 ORTHO05D000649 5.8e-06 54.7 109 33.9
QL07p037057 Quercus lobata HOM05D000980 ORTHO05D000649 5.8e-06 54.7 107 34.6
THA.LOC104823631 Tarenaya hassleriana HOM05D000980 ORTHO05D000649 5.8e-06 54.7 108 38.0
Peaxi162Scf00388g00011 Petunia axillaris HOM05D000980 ORTHO05D000649 7.6e-06 54.3 108 33.3
FAN09G3461 Fragaria x ananassa HOM05D000980 ORTHO05D000649 9.9e-06 53.9 111 29.7
Sabra16G0071400 Salix brachista HOM05D000980 ORTHO05D000649 9.9e-06 53.9 97 29.9


User provided reference genes

Program Settings