Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40809 Trifolium pratense HOM05D007125 ORTHO05D008766 3.7e-194 681.4 350 100.0
Medtr7g066750 Medicago truncatula HOM05D007125 ORTHO05D008766 7.0e-129 464.5 358 72.9
Ca_09172_v3 Cicer arietinum L. HOM05D007125 ORTHO05D008766 5.6e-126 454.9 360 72.5
Psat3g131480 Pisum sativum HOM05D007125 ORTHO05D008766 2.1e-125 453.0 360 69.2
Lj1g0008640 Lotus japonicus HOM05D007125 ORTHO05D008766 4.0e-100 369.0 365 60.3
Lalb_Chr03g0042991 Lupinus albus HOM05D007125 ORTHO05D008766 1.7e-98 363.6 366 56.6
Glyma.07G144800 Glycine max HOM05D007125 ORTHO05D008766 1.9e-94 350.1 363 57.6
arahy.Tifrunner.gnm1.ann1.A1GI61 Arachis hypogaea HOM05D007125 ORTHO05D008766 3.3e-86 322.8 367 52.3
arahy.Tifrunner.gnm1.ann1.8EY2MC Arachis hypogaea HOM05D007125 ORTHO05D008766 3.1e-84 316.2 367 51.5
Phvul.008G107900 Phaseolus vulgaris HOM05D007125 ORTHO05D008766 3.2e-81 306.2 360 52.5
VMungo1383G2599 Vigna mungo HOM05D007125 ORTHO05D008766 9.6e-78 294.7 365 51.2
Haze_20950 Corylus avellana HOM05D007125 ORTHO05D008766 1.3e-50 204.5 366 38.8
CiPaw.09G206100 Carya illinoinensis HOM05D007125 ORTHO05D008766 1.0e-39 168.3 371 34.2
Dinv35513 Davidia involucrata HOM05D007125 ORTHO05D008766 2.9e-34 150.2 378 32.3
Potri.006G096400 Populus trichocarpa HOM05D007125 ORTHO05D008766 6.1e-32 142.5 391 33.5
Atru.chr8.2198 Acer truncatum HOM05D007125 ORTHO05D008766 1.0e-31 141.7 348 32.5
Manes.08G087700 Manihot esculenta HOM05D007125 ORTHO05D008766 2.3e-31 140.6 380 31.3
TWI77G0961 Tripterygium wilfordii HOM05D007125 ORTHO05D008766 3.4e-30 136.7 362 31.5
TAR623G0133 Trochodendron aralioides HOM05D007125 ORTHO05D008766 9.7e-30 135.2 420 28.3
ClCG04G007250 Citrullus lanatus HOM05D007125 ORTHO05D008766 1.2e-27 128.3 388 29.9
Sabra06G0074100 Salix brachista HOM05D007125 ORTHO05D008766 1.7e-26 124.4 403 29.5
Duzib093G0828 Durio zibethinus HOM05D007125 ORTHO05D008766 3.2e-25 120.2 380 31.3
MELO3C003224.2 Cucumis melo HOM05D007125 ORTHO05D008766 4.7e-24 116.3 396 30.6
CsaV3_4G025990 Cucumis sativus L. HOM05D007125 ORTHO05D008766 3.0e-23 113.6 393 29.5
Thecc.05G022200 Theobroma cacao HOM05D007125 ORTHO05D008766 4.4e-22 109.8 364 30.5
CANSAT35G1716 Cannabis sativa HOM05D007125 ORTHO05D008766 4.8e-21 106.3 390 29.2
Gohir.D09G158900 Gossypium hirsutum HOM05D007125 ORTHO05D008766 6.3e-21 105.9 330 30.0
Gorai.006G180600 Gossypium raimondii HOM05D007125 ORTHO05D008766 9.1e-20 102.1 330 29.7
Gohir.A09G163400 Gossypium hirsutum HOM05D007125 ORTHO05D008766 1.2e-19 101.7 328 29.9
COL.COLO4_14596 Corchorus olitorius HOM05D007125 ORTHO05D008766 1.0e-18 98.6 356 32.6
CSS0003995 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 8.6e-18 95.5 380 27.9
PGR031G2086 Punica granatum HOM05D007125 ORTHO05D008766 1.5e-17 94.7 393 28.2
Actinidia29131 Actinidia chinensis HOM05D007125 ORTHO05D008766 1.2e-16 91.7 359 28.4
PSO384G0252 Papaver somniferum HOM05D007125 ORTHO05D008766 6.8e-15 85.9 372 26.1
Oeu044362.1 Olea europaea HOM05D007125 ORTHO05D008766 4.4e-14 83.2 353 27.8
Eucgr.B02785 Eucalyptus grandis HOM05D007125 ORTHO05D008766 6.3e-13 79.3 342 25.1
Sed0001650 Sechium edule HOM05D007125 ORTHO05D008766 6.3e-13 79.3 251 31.1
Nn2g11366 Nelumbo nucifera HOM05D007125 ORTHO05D008766 2.4e-12 77.4 317 28.4
Medtr8g062580 Medicago truncatula HOM05D000152 ORTHO05D001356 3.2e-12 77.0 61 70.5
MBI05_g03454_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 9.2e-12 75.5 269 30.9
DCAR_024035 Daucus carota HOM05D007125 ORTHO05D008766 1.6e-11 74.7 383 23.2
Hma1.2p1_0763F.1_g214650 Hydrangea macrophylla HOM05D007125 ORTHO05D008766 1.6e-11 74.7 190 31.6
Aqoxy1G00714 Aquilegia oxysepala HOM05D007125 ORTHO05D008766 5.0e-10 69.7 366 24.3
CDE04G1007 Ceratophyllum demersum HOM05D007125 ORTHO05D008766 2.5e-09 67.4 389 22.4
THA.LOC104823281 Tarenaya hassleriana HOM05D007125 ORTHO05D008766 3.6e-08 63.5 361 24.9
Lj2A79T37 Lonicera japonica HOM05D007125 ORTHO05D008766 6.1e-08 62.8 326 22.4
Sc01g0006790 Simmondsia chinensis HOM05D007125 ORTHO05D008766 8.9e-07 58.9 199 27.6


User provided reference genes

Program Settings