Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40783 Trifolium pratense HOM05D005160 ORTHO05D006127 6.8e-41 170.2 87 100.0
Medtr4g073620 Medicago truncatula HOM05D005160 ORTHO05D006127 1.9e-38 162.2 86 96.5
Psat7g175760 Pisum sativum HOM05D005160 ORTHO05D006127 1.9e-38 162.2 87 94.3
Ca_19053_v3 Cicer arietinum L. HOM05D005160 ORTHO05D006127 6.0e-37 157.1 87 90.8
VMungo1127G1693 Vigna mungo HOM05D005160 ORTHO05D006127 1.7e-36 155.6 87 88.5
Glyma.11G106500 Glycine max HOM05D005160 ORTHO05D006127 2.3e-36 155.2 87 87.4
Glyma.12G031600 Glycine max HOM05D005160 ORTHO05D006127 3.0e-36 154.8 87 88.5
Phvul.011G034500 Phaseolus vulgaris HOM05D005160 ORTHO05D006127 1.1e-35 152.9 87 86.2
Lj3g0012456 Lotus japonicus HOM05D005160 ORTHO05D006127 4.3e-35 151.0 87 88.5
FvH4_2g01450 Fragaria vesca HOM05D005160 ORTHO05D006127 8.9e-33 143.3 88 83.0
FAN15G3563 Fragaria x ananassa HOM05D005160 ORTHO05D006127 8.9e-33 143.3 88 83.0
FAN24G2272 Fragaria x ananassa HOM05D005160 ORTHO05D006127 8.9e-33 143.3 88 83.0
RcHm_v2.0_Chr6g0244091 Rosa chinensis HOM05D005160 ORTHO05D006127 2.6e-32 141.7 88 81.8
FAN20G0465 Fragaria x ananassa HOM05D005160 ORTHO05D006127 3.4e-32 141.4 88 81.8
FAN27G2227 Fragaria x ananassa HOM05D005160 ORTHO05D006127 3.4e-32 141.4 88 81.8
Lalb_Chr03g0025091 Lupinus albus HOM05D005160 ORTHO05D006127 2.2e-31 138.7 86 81.4
GSVIVG01024045001 Vitis vinifera HOM05D005160 ORTHO05D006127 3.7e-31 137.9 87 77.0
Cfa005223 Carpinus fangiana HOM05D005160 ORTHO05D006127 1.4e-30 136.0 87 75.9
Prupe.8G163700 Prunus persica HOM05D005160 ORTHO05D006127 1.9e-30 135.6 87 77.0
Haze_02160 Corylus avellana HOM05D005160 ORTHO05D006127 3.2e-30 134.8 87 74.7
Hma1.2p1_0163F.1_g072320 Hydrangea macrophylla HOM05D005160 ORTHO05D006127 7.0e-30 133.7 82 76.8
MD10G1123200 Malus domestica HOM05D005160 ORTHO05D006127 7.0e-30 133.7 87 74.7
Lalb_Chr01g0001791 Lupinus albus HOM05D005160 ORTHO05D006127 2.7e-29 131.7 86 77.9
Aqoxy5G01804 Aquilegia oxysepala HOM05D005160 ORTHO05D006127 4.6e-29 131.0 83 75.9
Rhsim11G0191300 Rhododendron simsii HOM05D005160 ORTHO05D006127 6.0e-29 130.6 82 75.6
SalBow1G7891 Salvia bowleyana HOM05D005160 ORTHO05D006127 7.8e-29 130.2 82 76.8
MD05G1119500 Malus domestica HOM05D005160 ORTHO05D006127 1.3e-28 129.4 87 72.4
Nn5g30735 Nelumbo nucifera HOM05D005160 ORTHO05D006127 1.3e-28 129.4 82 76.8
TAR381G1224 Trochodendron aralioides HOM05D005160 ORTHO05D006127 3.0e-28 128.3 82 76.8
MELO3C020808.2 Cucumis melo HOM05D005160 ORTHO05D006127 6.6e-28 127.1 87 71.3
Lj9A392T37 Lonicera japonica HOM05D005160 ORTHO05D006127 6.6e-28 127.1 78 75.6
CsaV3_2G015970 Cucumis sativus L. HOM05D005160 ORTHO05D006127 1.1e-27 126.3 87 71.3
Migut.B00095 Erythranthe guttata HOM05D005160 ORTHO05D006127 1.1e-27 126.3 73 80.8
Migut.B00916 Erythranthe guttata HOM05D005160 ORTHO05D006127 1.1e-27 126.3 84 75.0
Thecc.02G062800 Theobroma cacao HOM05D005160 ORTHO05D006127 1.5e-27 125.9 86 72.1
Thecc.02G062500 Theobroma cacao HOM05D005160 ORTHO05D006127 1.9e-27 125.6 86 73.3
Aa31LG6G16530 Aethionema arabicum HOM05D005160 ORTHO05D006127 2.5e-27 125.2 84 71.4
Duzib052G1050 Durio zibethinus HOM05D005160 ORTHO05D006127 2.5e-27 125.2 86 73.3
CARHR294360 Cardamine hirsuta HOM05D005160 ORTHO05D006127 3.3e-27 124.8 84 71.4
Eucgr.I01400 Eucalyptus grandis HOM05D005160 ORTHO05D006127 3.3e-27 124.8 84 67.9
Cc02_g16320 Coffea canephora HOM05D005160 ORTHO05D006127 5.6e-27 124.0 82 70.7
Sp7g37140 Schrenkiella parvula HOM05D005160 ORTHO05D006127 5.6e-27 124.0 75 77.3
CSS0048155 Camellia sinensis var. sinensis HOM05D005160 ORTHO05D006127 7.3e-27 123.6 84 71.4
MBI09_g14140_MAGBIO Magnolia biondii HOM05D005160 ORTHO05D006127 7.3e-27 123.6 82 70.7
CDE02G2386 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 9.5e-27 123.2 80 72.5
Oeu014453.1 Olea europaea HOM05D005160 ORTHO05D006127 9.5e-27 123.2 73 76.7
QL11p049938 Quercus lobata HOM05D005160 ORTHO05D006127 9.5e-27 123.2 85 71.8
ClCG02G011810 Citrullus lanatus HOM05D005160 ORTHO05D006127 1.2e-26 122.9 78 71.8
Thhalv10024826m.g Eutrema salsugineum HOM05D005160 ORTHO05D006127 1.2e-26 122.9 81 71.6
HanXRQChr17g0543921 Helianthus annuus HOM05D005160 ORTHO05D006127 1.2e-26 122.9 73 74.0
TWI31G1222 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 1.2e-26 122.9 87 72.4
AL7G10530 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 1.6e-26 122.5 84 70.2
Peaxi162Scf00362g00839 Petunia axillaris HOM05D005160 ORTHO05D006127 2.1e-26 122.1 72 77.8
CDE04G1868 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 3.6e-26 121.3 80 75.0
SGA_v2.0_scaffold58G20392 Striga asiatica HOM05D005160 ORTHO05D006127 4.7e-26 120.9 81 70.4
Carub.0007s0051 Capsella rubella HOM05D005160 ORTHO05D006127 6.2e-26 120.6 84 67.9
Lsat_1_v5_gn_3_46280 Lactuca sativa HOM05D005160 ORTHO05D006127 8.1e-26 120.2 82 67.1
MSTRG.16896 Avicennia marina HOM05D005160 ORTHO05D006127 1.1e-25 119.8 82 68.3
Cpa.g.sc37.160 Carica papaya HOM05D005160 ORTHO05D006127 1.1e-25 119.8 76 73.7
Duzib132G0556 Durio zibethinus HOM05D005160 ORTHO05D006127 1.1e-25 119.8 87 67.8
Migut.N03290 Erythranthe guttata HOM05D005160 ORTHO05D006127 1.1e-25 119.8 84 71.4
vmacro02269 Vaccinium macrocarpon HOM05D005160 ORTHO05D006127 1.1e-25 119.8 75 77.3
AT4G38640 Arabidopsis thaliana HOM05D005160 ORTHO05D006127 1.4e-25 119.4 84 66.7
Nitab4.5_0005837g0020 Nicotiana tabacum HOM05D005160 ORTHO05D006127 1.4e-25 119.4 71 74.6
BcaB03g12216 Brassica carinata HOM05D005160 ORTHO05D006127 2.3e-25 118.6 85 67.1
Nitab4.5_0001891g0030 Nicotiana tabacum HOM05D005160 ORTHO05D006127 3.1e-25 118.2 71 74.6
A08p24110 Brassica napus HOM05D005160 ORTHO05D006127 4.0e-25 117.9 84 66.7
Gohir.A01G166700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 4.0e-25 117.9 86 67.4
Sed0006607 Sechium edule HOM05D005160 ORTHO05D006127 4.0e-25 117.9 76 73.7
Sc08g0003030 Simmondsia chinensis HOM05D005160 ORTHO05D006127 4.0e-25 117.9 75 76.0
THA.LOC104824770 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 4.0e-25 117.9 71 76.1
BcaC01g00246 Brassica carinata HOM05D005160 ORTHO05D006127 5.2e-25 117.5 84 66.7
C03p77200 Brassica napus HOM05D005160 ORTHO05D006127 5.2e-25 117.5 84 66.7
BolC3t19975H Brassica oleracea HOM05D005160 ORTHO05D006127 5.2e-25 117.5 84 66.7
Atru.chr5.3293 Acer truncatum HOM05D005160 ORTHO05D006127 8.9e-25 116.7 88 64.8
DCAR_003159 Daucus carota HOM05D005160 ORTHO05D006127 8.9e-25 116.7 73 72.6
HPP92_025488 Vanilla planifolia HOM05D005160 ORTHO05D006127 2.0e-24 115.5 87 66.7
CiPaw.05G080400 Carya illinoinensis HOM05D005160 ORTHO05D006127 2.6e-24 115.2 77 68.8
Gohir.D01G157700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 3.4e-24 114.8 86 65.1
Gorai.002G195800 Gossypium raimondii HOM05D005160 ORTHO05D006127 3.4e-24 114.8 86 65.1
CAN.G588.54 Capsicum annuum HOM05D005160 ORTHO05D006127 4.4e-24 114.4 72 72.2
Ciclev10028126m.g Citrus clementina HOM05D005160 ORTHO05D006127 5.8e-24 114.0 86 67.4
Solyc01g111370.3 Solanum lycopersicum HOM05D005160 ORTHO05D006127 5.8e-24 114.0 72 70.8
THA.LOC104804092 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 5.8e-24 114.0 74 74.3
Sopen01g053440 Solanum pennellii HOM05D005160 ORTHO05D006127 1.3e-23 112.8 72 70.8
PGSC0003DMG402006199 Solanum tuberosum HOM05D005160 ORTHO05D006127 1.7e-23 112.5 72 70.8
ATR0579G151 Amborella trichopoda HOM05D005160 ORTHO05D006127 1.4e-22 109.4 75 70.7
PSO170G2472 Papaver somniferum HOM05D005160 ORTHO05D006127 2.4e-22 108.6 82 68.3
Hund06424 Selenicereus undatus HOM05D005160 ORTHO05D006127 2.4e-22 108.6 75 66.7
Manes.04G073300 Manihot esculenta HOM05D005160 ORTHO05D006127 5.4e-22 107.5 82 63.4
EL10Ac9g21400 Beta vulgaris HOM05D005160 ORTHO05D006127 7.1e-22 107.1 75 66.7
SGA_v2.0_scaffold32G13272 Striga asiatica HOM05D005160 ORTHO05D006127 1.2e-21 106.3 80 63.8
PSO700G0063 Papaver somniferum HOM05D005160 ORTHO05D006127 2.1e-21 105.5 82 68.3
Potri.009G132900 Populus trichocarpa HOM05D005160 ORTHO05D006127 3.5e-21 104.8 75 68.0
AUR62013051 Chenopodium quinoa HOM05D005160 ORTHO05D006127 4.6e-21 104.4 75 65.3
AUR62010059 Chenopodium quinoa HOM05D005160 ORTHO05D006127 7.8e-21 103.6 75 66.7
Ah.01g022840 Amaranthus hybridus HOM05D005160 ORTHO05D006127 1.0e-20 103.2 75 64.0
Lj5A181T55 Lonicera japonica HOM05D005160 ORTHO05D006127 1.3e-20 102.8 81 61.7
SEGI_18476 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 3.9e-20 101.3 71 64.8
TWI75G0220 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 5.1e-20 100.9 87 62.1
Potri.004G173600 Populus trichocarpa HOM05D005160 ORTHO05D006127 8.6e-20 100.1 75 65.3
SEGI_02117 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 1.5e-19 99.4 73 61.6
COL.COLO4_17310 Corchorus olitorius HOM05D005160 ORTHO05D006127 2.5e-19 98.6 61 80.3
Sabra09G0103200 Salix brachista HOM05D005160 ORTHO05D006127 4.0e-17 91.3 63 69.8
Actinidia20505 Actinidia chinensis HOM05D005160 ORTHO05D006127 5.2e-17 90.9 55 76.4
CiPaw.06G123200 Carya illinoinensis HOM05D005160 ORTHO05D006127 5.2e-17 90.9 56 73.2
Dinv41951 Davidia involucrata HOM05D005160 ORTHO05D006127 6.8e-17 90.5 55 78.2
ECA246G0167 Erigeron canadensis HOM05D005160 ORTHO05D006127 5.8e-16 87.4 56 73.2
Sabra04G0115600 Salix brachista HOM05D005160 ORTHO05D006127 2.9e-15 85.1 63 65.1
Pp3c15_6240 Physcomitrium patens HOM05D005160 ORTHO05D006127 7.3e-11 70.5 80 43.8
SMO012G0038 Selaginella moellendorffii HOM05D005160 ORTHO05D006127 1.3e-10 69.7 75 41.3
Actinidia00615 Actinidia chinensis HOM05D005160 ORTHO05D006127 5.3e-09 64.3 43 69.8
AL7G44960 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 2.0e-08 62.4 55 54.5
AagrBONN_evm.TU.Sc2ySwM_344.1211 Anthoceros agrestis HOM05D005160 ORTHO05D006127 2.6e-08 62.0 68 47.1
Mapoly0029s0105 Marchantia polymorpha HOM05D005160 ORTHO05D006127 9.9e-08 60.1 83 37.3
Pp3c24_1990 Physcomitrium patens HOM05D005160 ORTHO05D006127 2.4e-06 55.5 70 40.0


User provided reference genes

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