Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40727 Trifolium pratense HOM05D005790 ORTHO05D007464 3.7e-20 100.5 49 100.0
Medtr3g113190 Medicago truncatula HOM05D005790 ORTHO05D007464 1.2e-13 79.0 43 90.7
Lalb_Chr08g0246071 Lupinus albus HOM05D005790 ORTHO05D007464 2.0e-13 78.2 46 82.6
Psat5g014800 Pisum sativum HOM05D005790 ORTHO05D007464 2.0e-13 78.2 43 88.4
Ca_02056_v3 Cicer arietinum L. HOM05D005790 ORTHO05D007464 3.4e-13 77.4 43 83.7
Lj1g0012079 Lotus japonicus HOM05D005790 ORTHO05D007464 2.0e-10 68.2 44 75.0
arahy.Tifrunner.gnm1.ann1.BXK9RQ Arachis hypogaea HOM05D005790 ORTHO05D007464 1.0e-09 65.9 46 73.9
arahy.Tifrunner.gnm1.ann1.S6ZM1I Arachis hypogaea HOM05D005790 ORTHO05D007464 1.0e-09 65.9 46 73.9
VMungo1309G1814 Vigna mungo HOM05D005790 ORTHO05D007464 8.6e-09 62.8 43 72.1
Phvul.009G014700 Phaseolus vulgaris HOM05D005790 ORTHO05D007464 1.5e-08 62.0 43 69.8
Glyma.06G026400 Glycine max HOM05D005790 ORTHO05D007464 1.9e-08 61.6 43 72.1
Sed0009865 Sechium edule HOM05D005790 ORTHO05D007464 1.6e-07 58.5 46 60.9
CsaV3_1G045470 Cucumis sativus L. HOM05D005790 ORTHO05D007464 2.8e-07 57.8 46 58.7
RcHm_v2.0_Chr6g0272131 Rosa chinensis HOM05D005790 ORTHO05D007464 2.8e-07 57.8 44 56.8
Atru.chr13.345 Acer truncatum HOM05D005790 ORTHO05D007464 4.7e-07 57.0 44 59.1
MD08G1017100 Malus domestica HOM05D005790 ORTHO05D007464 4.7e-07 57.0 47 55.3
Thecc.08G038500 Theobroma cacao HOM05D005790 ORTHO05D007464 6.2e-07 56.6 46 60.9
CSS0048998 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 8.1e-07 56.2 44 59.1
CSS0050056 Camellia sinensis var. sinensis HOM05D005790 ORTHO05D007464 8.1e-07 56.2 44 59.1
MELO3C024652.2 Cucumis melo HOM05D005790 ORTHO05D007464 1.1e-06 55.8 46 56.5
Cfa013914 Carpinus fangiana HOM05D005790 ORTHO05D007464 1.4e-06 55.5 44 59.1
Duzib093G0196 Durio zibethinus HOM05D005790 ORTHO05D007464 1.4e-06 55.5 46 58.7
ClCG05G018560 Citrullus lanatus HOM05D005790 ORTHO05D007464 1.8e-06 55.1 46 54.3
Rhsim06G0026000 Rhododendron simsii HOM05D005790 ORTHO05D007464 1.8e-06 55.1 44 56.8
COL.COLO4_26188 Corchorus olitorius HOM05D005790 ORTHO05D007464 2.3e-06 54.7 46 58.7
Prupe.1G369900 Prunus persica HOM05D005790 ORTHO05D007464 2.3e-06 54.7 44 56.8
Potri.009G002100 Populus trichocarpa HOM05D005790 ORTHO05D007464 3.1e-06 54.3 44 54.5
QL02p010842 Quercus lobata HOM05D005790 ORTHO05D007464 3.1e-06 54.3 44 56.8
MD15G1016100 Malus domestica HOM05D005790 ORTHO05D007464 4.0e-06 53.9 44 54.5
Manes.13G125500 Manihot esculenta HOM05D005790 ORTHO05D007464 4.0e-06 53.9 44 56.8
PSO541G0736 Papaver somniferum HOM05D005790 ORTHO05D007464 4.0e-06 53.9 46 56.5
PGR031G1208 Punica granatum HOM05D005790 ORTHO05D007464 5.2e-06 53.5 46 54.3
PSO675G3524 Papaver somniferum HOM05D005790 ORTHO05D007464 6.8e-06 53.1 46 54.3
TAR381G1687 Trochodendron aralioides HOM05D005790 ORTHO05D007464 6.8e-06 53.1 44 54.5
CANSAT01G0079 Cannabis sativa HOM05D005790 ORTHO05D007464 8.9e-06 52.8 46 54.3
Haze_22599 Corylus avellana HOM05D005790 ORTHO05D007464 8.9e-06 52.8 43 58.1
Dinv31817 Davidia involucrata HOM05D005790 ORTHO05D007464 8.9e-06 52.8 44 54.5
Sabra09G0000400 Salix brachista HOM05D005790 ORTHO05D007464 8.9e-06 52.8 43 53.5


User provided reference genes

Program Settings