Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40718 Trifolium pratense HOM05D000481 ORTHO05D411013 1.1e-41 172.9 89 100.0
Medtr4g008530 Medicago truncatula HOM05D000481 ORTHO05D000471 6.3e-26 120.6 90 76.7
Ca_30538_v3 Cicer arietinum L. HOM05D000481 ORTHO05D000471 4.7e-21 104.4 82 76.8
Psat7g258960 Pisum sativum HOM05D000481 ORTHO05D000471 1.4e-20 102.8 90 66.7
Glyma.08G216800 Glycine max HOM05D000481 ORTHO05D000471 5.9e-16 87.4 89 61.8
Glyma.07G025600 Glycine max HOM05D000481 ORTHO05D000471 9.5e-14 80.1 89 57.3
Sed0011649 Sechium edule HOM05D000481 ORTHO05D000471 1.4e-12 76.3 88 54.5
Lj3g0021864 Lotus japonicus HOM05D000481 ORTHO05D000471 5.2e-12 74.3 88 54.5
Lalb_Chr01g0012191 Lupinus albus HOM05D000481 ORTHO05D000471 6.8e-12 73.9 90 62.2
FAN14G2697 Fragaria x ananassa HOM05D000481 ORTHO05D000471 4.4e-11 71.2 87 57.5
FAN02G2070 Fragaria x ananassa HOM05D000481 ORTHO05D000471 9.8e-11 70.1 87 57.5
FAN05G4173 Fragaria x ananassa HOM05D000481 ORTHO05D000471 9.8e-11 70.1 87 57.5
FAN09G4639 Fragaria x ananassa HOM05D000481 ORTHO05D000471 9.8e-11 70.1 87 57.5
arahy.Tifrunner.gnm1.ann1.4RXH8Y Arachis hypogaea HOM05D000481 ORTHO05D000471 2.8e-10 68.6 90 53.3
CiPaw.01G253000 Carya illinoinensis HOM05D000481 ORTHO05D000471 4.9e-10 67.8 87 55.2
MELO3C023460.2 Cucumis melo HOM05D000481 ORTHO05D000471 1.1e-09 66.6 88 52.3
Lalb_Chr04g0264361 Lupinus albus HOM05D000481 ORTHO05D000471 1.1e-09 66.6 91 52.7
Gohir.A05G120300 Gossypium hirsutum HOM05D000481 ORTHO05D000471 1.4e-09 66.2 89 53.9
Gohir.D05G121300 Gossypium hirsutum HOM05D000481 ORTHO05D000471 1.4e-09 66.2 89 53.9
Gorai.009G124800 Gossypium raimondii HOM05D000481 ORTHO05D000471 1.4e-09 66.2 89 53.9
Phvul.010G159700 Phaseolus vulgaris HOM05D000481 ORTHO05D000471 1.8e-09 65.9 82 51.2
Potri.003G180400 Populus trichocarpa HOM05D000481 ORTHO05D000471 2.4e-09 65.5 87 54.0
Cfa001893 Carpinus fangiana HOM05D000481 ORTHO05D000471 5.4e-09 64.3 87 52.9
CsaV3_7G031970 Cucumis sativus L. HOM05D000481 ORTHO05D000471 5.4e-09 64.3 88 50.0
Sabra03G0132000 Salix brachista HOM05D000481 ORTHO05D000471 5.4e-09 64.3 80 57.5
arahy.Tifrunner.gnm1.ann1.N77NRG Arachis hypogaea HOM05D000481 ORTHO05D000471 7.0e-09 63.9 92 50.0
Haze_16647 Corylus avellana HOM05D000481 ORTHO05D000471 1.2e-08 63.2 87 52.9
FvH4_6g28860 Fragaria vesca HOM05D000481 ORTHO05D000471 2.0e-08 62.4 87 56.3
RcHm_v2.0_Chr2g0133411 Rosa chinensis HOM05D000481 ORTHO05D000471 3.5e-08 61.6 87 56.3
Thecc.06G038800 Theobroma cacao HOM05D000481 ORTHO05D000471 1.0e-07 60.1 88 50.0
Duzib160G0221 Durio zibethinus HOM05D000481 ORTHO05D000471 1.7e-07 59.3 88 52.3
MD09G1223900 Malus domestica HOM05D000481 ORTHO05D000471 8.6e-07 57.0 90 51.1
Manes.11G064400 Manihot esculenta HOM05D000481 ORTHO05D000471 1.5e-06 56.2 86 45.3
QL05p035061 Quercus lobata HOM05D000481 ORTHO05D000471 9.5e-06 53.5 87 44.8


User provided reference genes

Program Settings