Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40707 Trifolium pratense HOM05D000609 ORTHO05D000462 6.1e-63 244.6 188 100.0
Medtr2g090235 Medicago truncatula HOM05D000609 ORTHO05D000462 2.6e-45 186.0 193 69.4
Psat5g271720 Pisum sativum HOM05D000609 ORTHO05D000462 6.4e-28 128.3 72 84.7
Ca_01509_v3 Cicer arietinum L. HOM05D000609 ORTHO05D000462 1.9e-27 126.7 198 56.6
Glyma.12G203100 Glycine max HOM05D000609 ORTHO05D000462 4.3e-24 115.5 207 55.6
Glyma.13G298600 Glycine max HOM05D000609 ORTHO05D000462 4.3e-24 115.5 201 55.2
Phvul.005G105200 Phaseolus vulgaris HOM05D000609 ORTHO05D000462 1.1e-19 100.9 196 40.8
QL08p038189 Quercus lobata HOM05D000609 ORTHO05D000462 5.1e-17 92.0 202 47.5
Glyma.06G295300 Glycine max HOM05D000609 ORTHO05D000462 4.3e-16 89.0 193 37.8
VMungo1080G1501 Vigna mungo HOM05D000609 ORTHO05D000462 1.6e-15 87.0 197 44.7
Haze_13135 Corylus avellana HOM05D000609 ORTHO05D000462 3.6e-15 85.9 207 37.7
Glyma.12G110400 Glycine max HOM05D000609 ORTHO05D000462 6.2e-15 85.1 191 41.4
Cfa014583 Carpinus fangiana HOM05D000609 ORTHO05D000462 2.4e-14 83.2 208 33.2
CiPaw.03G174500 Carya illinoinensis HOM05D000609 ORTHO05D000462 3.1e-14 82.8 200 33.5
VMungo1127G1433 Vigna mungo HOM05D000609 ORTHO05D000462 1.2e-13 80.9 201 43.3
Phvul.011G118600 Phaseolus vulgaris HOM05D000609 ORTHO05D000462 1.3e-12 77.4 194 40.2
Ciclev10015144m.g Citrus clementina HOM05D000609 ORTHO05D000462 6.4e-12 75.1 207 34.3
Thecc.02G176800 Theobroma cacao HOM05D000609 ORTHO05D000462 6.4e-12 75.1 217 41.9
Lalb_Chr14g0366811 Lupinus albus HOM05D000609 ORTHO05D000462 1.1e-11 74.3 206 36.4
Potri.013G135600 Populus trichocarpa HOM05D000609 ORTHO05D000462 1.4e-11 73.9 214 33.6
CiPaw.04G124700 Carya illinoinensis HOM05D000609 ORTHO05D000462 1.6e-10 70.5 168 33.9
CANSAT08G0001 Cannabis sativa HOM05D000609 ORTHO05D000462 2.7e-10 69.7 202 37.6
MD17G1244300 Malus domestica HOM05D000609 ORTHO05D000462 7.9e-10 68.2 197 33.0
TWI75G1120 Tripterygium wilfordii HOM05D000609 ORTHO05D000462 1.3e-09 67.4 198 41.9
MD09G1252000 Malus domestica HOM05D000609 ORTHO05D000462 3.9e-09 65.9 176 36.9
COL.COLO4_06984 Corchorus olitorius HOM05D000609 ORTHO05D000462 5.1e-09 65.5 205 42.4
PGR142G3899 Punica granatum HOM05D000609 ORTHO05D000462 6.7e-09 65.1 194 34.0
Potri.019G102200 Populus trichocarpa HOM05D000609 ORTHO05D000462 8.7e-09 64.7 212 31.1
Gohir.A12G138100 Gossypium hirsutum HOM05D000609 ORTHO05D000462 2.5e-08 63.2 196 32.1
Gohir.D12G142100 Gossypium hirsutum HOM05D000609 ORTHO05D000462 2.5e-08 63.2 196 33.2
Sabra19G0113400 Salix brachista HOM05D000609 ORTHO05D000462 3.3e-08 62.8 206 28.6
Gorai.008G153600 Gossypium raimondii HOM05D000609 ORTHO05D000462 4.3e-08 62.4 196 33.2
CSS0000647 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 5.6e-08 62.0 181 31.5
Lalb_Chr03g0029301 Lupinus albus HOM05D000609 ORTHO05D000462 7.4e-08 61.6 189 36.0
Duzib132G0836 Durio zibethinus HOM05D000609 ORTHO05D000462 1.3e-07 60.8 216 31.9
Gohir.A03G157800 Gossypium hirsutum HOM05D000609 ORTHO05D000462 1.3e-07 60.8 194 47.9
HanXRQChr17g0554691 Helianthus annuus HOM05D000609 ORTHO05D000462 6.2e-07 58.5 198 38.9
Rhsim06G0147200 Rhododendron simsii HOM05D000609 ORTHO05D000462 8.1e-07 58.2 198 40.9
THA.LOC104824714 Tarenaya hassleriana HOM05D000609 ORTHO05D000462 8.1e-07 58.2 202 28.7
TWI18G0869 Tripterygium wilfordii HOM05D000609 ORTHO05D000462 1.1e-06 57.8 196 34.7
CSS0011861 Camellia sinensis var. sinensis HOM05D000609 ORTHO05D000462 1.4e-06 57.4 207 33.3
Sabra13G0114800 Salix brachista HOM05D000609 ORTHO05D000462 1.4e-06 57.4 218 35.8
Duzib052G0967 Durio zibethinus HOM05D000609 ORTHO05D000462 1.8e-06 57.0 217 34.1
Gorai.005G202900 Gossypium raimondii HOM05D000609 ORTHO05D000462 1.8e-06 57.0 200 46.0
Prupe.3G157100 Prunus persica HOM05D000609 ORTHO05D000462 1.8e-06 57.0 201 43.3
Actinidia09869 Actinidia chinensis HOM05D000609 ORTHO05D000462 2.4e-06 56.6 215 28.4
Cpa.g.sc34.132 Carica papaya HOM05D000609 ORTHO05D000462 2.4e-06 56.6 198 35.4
Gohir.A04G104800 Gossypium hirsutum HOM05D000609 ORTHO05D000462 2.4e-06 56.6 156 37.8
Gorai.012G130600 Gossypium raimondii HOM05D000609 ORTHO05D000462 2.4e-06 56.6 154 34.4
Atru.chr6.3013 Acer truncatum HOM05D000609 ORTHO05D000462 3.1e-06 56.2 167 35.3
Nn1g06634 Nelumbo nucifera HOM05D000609 ORTHO05D000462 5.3e-06 55.5 186 40.3
MBI17_g42660_MAGBIO Magnolia biondii HOM05D000609 ORTHO05D000462 9.0e-06 54.7 165 29.1
Sopen07g028150 Solanum pennellii HOM05D000609 ORTHO05D000462 9.0e-06 54.7 141 31.2


User provided reference genes

Program Settings