Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40666 Trifolium pratense HOM05D000972 ORTHO05D007902 3.5e-32 141.0 68 100.0
Psat2g186760 Pisum sativum HOM05D000972 ORTHO05D007902 7.7e-24 113.2 57 93.0
LjContig00222g0015412 Lotus japonicus HOM05D000972 ORTHO05D007902 1.7e-23 112.1 57 93.0
Ca_24478_v3 Cicer arietinum L. HOM05D000972 ORTHO05D007902 8.5e-23 109.8 57 89.5
arahy.Tifrunner.gnm1.ann1.ARI0Y2 Arachis hypogaea HOM05D000972 ORTHO05D007902 2.5e-22 108.2 57 86.0
arahy.Tifrunner.gnm1.ann1.T9SADQ Arachis hypogaea HOM05D000972 ORTHO05D007902 2.5e-22 108.2 57 86.0
Lalb_Chr05g0211421 Lupinus albus HOM05D000972 ORTHO05D007902 4.2e-22 107.5 57 89.5
VMungo1309G3099 Vigna mungo HOM05D000972 ORTHO05D007902 5.5e-22 107.1 57 84.2
Phvul.002G035500 Phaseolus vulgaris HOM05D000972 ORTHO05D007902 1.6e-21 105.5 57 82.5
FvH4_5g33210 Fragaria vesca HOM05D000972 ORTHO05D007902 6.1e-21 103.6 57 80.7
FAN18G3413 Fragaria x ananassa HOM05D000972 ORTHO05D007902 6.1e-21 103.6 57 80.7
Glyma.11G014500 Glycine max HOM05D000972 ORTHO05D007902 6.1e-21 103.6 57 84.2
RcHm_v2.0_Chr7g0231591 Rosa chinensis HOM05D000972 ORTHO05D007902 1.0e-20 102.8 57 80.7
Haze_13936 Corylus avellana HOM05D000972 ORTHO05D007902 1.4e-20 102.4 57 78.9
Glyma.01G231600 Glycine max HOM05D000972 ORTHO05D007902 1.4e-20 102.4 57 84.2
Hma1.2p1_0442F.1_g153990 Hydrangea macrophylla HOM05D000972 ORTHO05D007902 1.4e-20 102.4 58 82.8
Manes.02G207800 Manihot esculenta HOM05D000972 ORTHO05D007902 2.3e-20 101.7 57 82.5
QL09p003678 Quercus lobata HOM05D000972 ORTHO05D007902 2.3e-20 101.7 57 82.5
Cpa.g.sc21.65 Carica papaya HOM05D000972 ORTHO05D007902 4.0e-20 100.9 57 80.7
Cfa008100 Carpinus fangiana HOM05D000972 ORTHO05D007902 5.2e-20 100.5 57 77.2
MBI06_g15296_MAGBIO Magnolia biondii HOM05D000972 ORTHO05D007902 6.8e-20 100.1 57 77.2
COL.COLO4_24587 Corchorus olitorius HOM05D000972 ORTHO05D007902 8.8e-20 99.8 57 78.9
Thhalv10028731m.g Eutrema salsugineum HOM05D000972 ORTHO05D007902 1.2e-19 99.4 57 78.9
Sp6g07390 Schrenkiella parvula HOM05D000972 ORTHO05D007902 1.2e-19 99.4 57 78.9
CiPaw.03G016500 Carya illinoinensis HOM05D000972 ORTHO05D007902 1.5e-19 99.0 57 77.2
Dinv09399 Davidia involucrata HOM05D000972 ORTHO05D007902 1.5e-19 99.0 57 78.9
PSO170G0001 Papaver somniferum HOM05D000972 ORTHO05D007902 2.0e-19 98.6 57 77.2
BraA02t07681Z Brassica rapa HOM05D000972 ORTHO05D007902 2.6e-19 98.2 57 75.4
A02p26770 Brassica napus HOM05D000972 ORTHO05D007902 3.4e-19 97.8 57 75.4
CAN.G1199.5 Capsicum annuum HOM05D000972 ORTHO05D007902 4.4e-19 97.4 57 75.4
THA.LOC104815868 Tarenaya hassleriana HOM05D000972 ORTHO05D007902 5.7e-19 97.1 57 77.2
DCAR_014005 Daucus carota HOM05D000972 ORTHO05D007902 7.5e-19 96.7 57 71.9
Gohir.A13G116900 Gossypium hirsutum HOM05D000972 ORTHO05D007902 7.5e-19 96.7 57 77.2
MD15G1397200 Malus domestica HOM05D000972 ORTHO05D007902 7.5e-19 96.7 57 77.2
Potri.019G074600 Populus trichocarpa HOM05D000972 ORTHO05D007902 7.5e-19 96.7 57 77.2
Solyc06g064640.3 Solanum lycopersicum HOM05D000972 ORTHO05D007902 7.5e-19 96.7 57 75.4
Sopen06g023120 Solanum pennellii HOM05D000972 ORTHO05D007902 7.5e-19 96.7 57 75.4
AL6G43750 Arabidopsis lyrata HOM05D000972 ORTHO05D007902 9.7e-19 96.3 57 77.2
AT4G10030 Arabidopsis thaliana HOM05D000972 ORTHO05D007902 9.7e-19 96.3 57 77.2
CANSAT25G3161 Cannabis sativa HOM05D000972 ORTHO05D007902 9.7e-19 96.3 57 73.7
Atru.chr13.2464 Acer truncatum HOM05D000972 ORTHO05D007902 1.3e-18 95.9 57 75.4
BcaC03g16432 Brassica carinata HOM05D000972 ORTHO05D007902 1.3e-18 95.9 57 75.4
C02p42570 Brassica napus HOM05D000972 ORTHO05D007902 1.3e-18 95.9 57 75.4
Carub.0006s2858 Capsella rubella HOM05D000972 ORTHO05D007902 1.3e-18 95.9 57 75.4
Duzib177G0312 Durio zibethinus HOM05D000972 ORTHO05D007902 1.3e-18 95.9 57 73.7
Eucgr.F02972 Eucalyptus grandis HOM05D000972 ORTHO05D007902 1.3e-18 95.9 57 77.2
TWI18G0505 Tripterygium wilfordii HOM05D000972 ORTHO05D007902 1.3e-18 95.9 57 75.4
ATR1089G075 Amborella trichopoda HOM05D000972 ORTHO05D007902 1.7e-18 95.5 57 73.7
CARHR261030 Cardamine hirsuta HOM05D000972 ORTHO05D007902 1.7e-18 95.5 57 73.7
Ciclev10020574m.g Citrus clementina HOM05D000972 ORTHO05D007902 1.7e-18 95.5 55 80.0
Cc10_g09070 Coffea canephora HOM05D000972 ORTHO05D007902 1.7e-18 95.5 57 73.7
Gohir.D13G120200 Gossypium hirsutum HOM05D000972 ORTHO05D007902 1.7e-18 95.5 57 75.4
Gorai.013G134500 Gossypium raimondii HOM05D000972 ORTHO05D007902 1.7e-18 95.5 57 75.4
PSO017G6211 Papaver somniferum HOM05D000972 ORTHO05D007902 1.7e-18 95.5 57 73.7
Peaxi162Scf00961g00038 Petunia axillaris HOM05D000972 ORTHO05D007902 1.7e-18 95.5 57 73.7
TAR381G0923 Trochodendron aralioides HOM05D000972 ORTHO05D007902 1.7e-18 95.5 57 71.9
BcaB01g02768 Brassica carinata HOM05D000972 ORTHO05D007902 2.2e-18 95.1 57 75.4
Dinv01246 Davidia involucrata HOM05D000972 ORTHO05D007902 2.2e-18 95.1 57 77.2
Oeu013903.1 Olea europaea HOM05D000972 ORTHO05D007902 2.2e-18 95.1 57 77.2
A03p28830 Brassica napus HOM05D000972 ORTHO05D007902 2.8e-18 94.7 57 75.4
BolC3t15797H Brassica oleracea HOM05D000972 ORTHO05D007902 2.8e-18 94.7 57 75.4
BraA03t12081Z Brassica rapa HOM05D000972 ORTHO05D007902 2.8e-18 94.7 57 75.4
Nitab4.5_0003510g0110 Nicotiana tabacum HOM05D000972 ORTHO05D007902 2.8e-18 94.7 57 73.7
Sabra15G0089800 Salix brachista HOM05D000972 ORTHO05D007902 2.8e-18 94.7 61 72.1
Thecc.08G174600 Theobroma cacao HOM05D000972 ORTHO05D007902 2.8e-18 94.7 57 73.7
BcaC01g04694 Brassica carinata HOM05D000972 ORTHO05D007902 3.7e-18 94.4 57 75.4
C03p34850 Brassica napus HOM05D000972 ORTHO05D007902 3.7e-18 94.4 57 75.4
SalBow7G1915 Salvia bowleyana HOM05D000972 ORTHO05D007902 4.8e-18 94.0 56 75.0
Nitab4.5_0002654g0090 Nicotiana tabacum HOM05D000972 ORTHO05D007902 6.3e-18 93.6 57 71.9
Sabra19G0085300 Salix brachista HOM05D000972 ORTHO05D007902 6.3e-18 93.6 57 75.4
CSS0002465 Camellia sinensis var. sinensis HOM05D000972 ORTHO05D007902 8.3e-18 93.2 57 71.9
HanXRQChr11g0326371 Helianthus annuus HOM05D000972 ORTHO05D007902 8.3e-18 93.2 57 70.2
Actinidia29393 Actinidia chinensis HOM05D000972 ORTHO05D007902 1.1e-17 92.8 57 71.9
CDE07G1949 Ceratophyllum demersum HOM05D000972 ORTHO05D007902 1.4e-17 92.4 57 68.4
ECA232G4303 Erigeron canadensis HOM05D000972 ORTHO05D007902 1.4e-17 92.4 57 70.2
Aa31LG9G11960 Aethionema arabicum HOM05D000972 ORTHO05D007902 1.8e-17 92.0 57 73.7
Aqoxy5G00848 Aquilegia oxysepala HOM05D000972 ORTHO05D007902 3.1e-17 91.3 57 70.2
Migut.C01362 Erythranthe guttata HOM05D000972 ORTHO05D007902 4.1e-17 90.9 57 70.2
GSVIVG01036396001 Vitis vinifera HOM05D000972 ORTHO05D007902 4.1e-17 90.9 57 70.2
Prupe.1G546000 Prunus persica HOM05D000972 ORTHO05D007902 5.3e-17 90.5 58 70.7
ClCG11G008910 Citrullus lanatus HOM05D000972 ORTHO05D007902 9.1e-17 89.7 57 71.9
CsaV3_2G033140 Cucumis sativus L. HOM05D000972 ORTHO05D007902 9.1e-17 89.7 57 71.9
Lsat_1_v5_gn_4_133140 Lactuca sativa HOM05D000972 ORTHO05D007902 1.2e-16 89.4 55 67.3
MSTRG.25494 Avicennia marina HOM05D000972 ORTHO05D007902 1.6e-16 89.0 57 68.4
HPP92_012703 Vanilla planifolia HOM05D000972 ORTHO05D007902 2.0e-16 88.6 57 64.9
Actinidia03520 Actinidia chinensis HOM05D000972 ORTHO05D007902 2.7e-16 88.2 67 64.2
HPP92_012684 Vanilla planifolia HOM05D000972 ORTHO05D007902 3.5e-16 87.8 57 64.9
MELO3C008085.2 Cucumis melo HOM05D000972 ORTHO05D007902 4.5e-16 87.4 57 70.2
EL10Ac1g01707 Beta vulgaris HOM05D000972 ORTHO05D007902 5.9e-16 87.0 57 68.4
Sc10g0009040 Simmondsia chinensis HOM05D000972 ORTHO05D007902 1.3e-15 85.9 57 66.7
Zm00001eb145490 Zea mays HOM05D000972 ORTHO05D007902 1.3e-15 85.9 57 66.7
Os01g0885600 Oryza sativa ssp. japonica HOM05D000972 ORTHO05D007902 1.7e-15 85.5 57 66.7
Sed0026479 Sechium edule HOM05D000972 ORTHO05D007902 1.7e-15 85.5 55 72.7
PGR042G1357 Punica granatum HOM05D000972 ORTHO05D007902 2.2e-15 85.1 57 64.9
Hund02269 Selenicereus undatus HOM05D000972 ORTHO05D007902 6.5e-15 83.6 57 64.9
AUR62022408 Chenopodium quinoa HOM05D000972 ORTHO05D007902 1.9e-14 82.0 58 63.8
Mapoly0057s0050 Marchantia polymorpha HOM05D000972 ORTHO05D007902 1.9e-14 82.0 60 60.0
AUR62042166 Chenopodium quinoa HOM05D000972 ORTHO05D007902 9.4e-14 79.7 59 61.0
Lsat_1_v5_gn_3_130281 Lactuca sativa HOM05D001939 ORTHO05D000541 9.4e-14 79.7 55 63.6
Pp3c9_110 Physcomitrium patens HOM05D000972 ORTHO05D007902 1.6e-13 79.0 60 56.7
AagrBONN_evm.TU.Sc2ySwM_228.2032 Anthoceros agrestis HOM05D000972 ORTHO05D007902 3.6e-13 77.8 60 56.7
SMO351G0469 Selaginella moellendorffii HOM05D000972 ORTHO05D007902 6.8e-12 73.6 60 56.7
Dinv12388 Davidia involucrata HOM05D000972 ORTHO05D007902 8.8e-12 73.2 48 79.2
vmacro11036 Vaccinium macrocarpon HOM05D000972 ORTHO05D007902 1.2e-11 72.8 101 43.6
Lj9A699G51 Lonicera japonica HOM05D000972 ORTHO05D007902 1.5e-11 72.4 58 60.3
CBR_g4880 Chara braunii HOM05D000972 ORTHO05D007902 5.7e-11 70.5 60 53.3
SEGI_17242 Sequoiadendron giganteum HOM05D000972 ORTHO05D007902 3.1e-09 64.7 35 77.1
Rhsim02G0173700 Rhododendron simsii HOM05D000972 ORTHO05D007902 4.1e-09 64.3 35 77.1
CSS0032096 Camellia sinensis var. sinensis HOM05D000972 ORTHO05D007902 7.0e-09 63.5 36 75.0
Cre08.g384600 Chlamydomonas reinhardtii HOM05D000972 ORTHO05D007902 1.6e-08 62.4 59 49.2
unitig_37.g13083 Utricularia gibba HOM05D000972 ORTHO05D007902 1.5e-06 55.8 35 62.9
FvH4_5g32660 Fragaria vesca HOM05D000972 ORTHO05D007902 4.2e-06 54.3 28 75.0
FAN18G0128 Fragaria x ananassa HOM05D000972 ORTHO05D007902 4.2e-06 54.3 28 75.0


User provided reference genes

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