Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40658 Trifolium pratense HOM05D005831 ORTHO05D007007 3.8e-73 278.1 143 100.0
Medtr1g015390 Medicago truncatula HOM05D005831 ORTHO05D007007 3.0e-62 241.9 143 89.5
VMungo0647G0599 Vigna mungo HOM05D005831 ORTHO05D007007 1.1e-56 223.4 143 82.5
Phvul.001G039000 Phaseolus vulgaris HOM05D005831 ORTHO05D007007 1.5e-56 223.0 143 82.5
Lj5g0001901 Lotus japonicus HOM05D005831 ORTHO05D007007 4.2e-56 221.5 143 81.1
Glyma.14G099100 Glycine max HOM05D005831 ORTHO05D007007 5.5e-56 221.1 143 80.4
Glyma.17G225600 Glycine max HOM05D005831 ORTHO05D007007 2.0e-53 212.6 143 81.1
Lalb_Chr09g0334801 Lupinus albus HOM05D005831 ORTHO05D007007 3.1e-51 205.3 142 73.9
TPR.G10653 Trifolium pratense HOM05D005831 ORTHO05D007007 3.5e-50 201.8 143 76.9
Psat6g022600 Pisum sativum HOM05D005831 ORTHO05D007007 1.7e-49 199.5 127 81.9
QL04p096581 Quercus lobata HOM05D005831 ORTHO05D007007 2.2e-49 199.1 143 74.1
Prupe.1G405700 Prunus persica HOM05D005831 ORTHO05D007007 2.9e-49 198.7 143 72.0
MD08G1070400 Malus domestica HOM05D005831 ORTHO05D007007 8.5e-49 197.2 143 72.0
COL.COLO4_21126 Corchorus olitorius HOM05D005831 ORTHO05D007007 1.9e-48 196.1 142 74.6
Haze_18115 Corylus avellana HOM05D005831 ORTHO05D007007 1.9e-48 196.1 143 71.3
Thecc.09G062000 Theobroma cacao HOM05D005831 ORTHO05D007007 3.2e-48 195.3 142 73.2
GSVIVG01035453001 Vitis vinifera HOM05D005831 ORTHO05D007007 3.2e-48 195.3 142 71.1
Duzib150G1275 Durio zibethinus HOM05D005831 ORTHO05D007007 5.5e-48 194.5 142 74.6
Cfa018014 Carpinus fangiana HOM05D005831 ORTHO05D007007 2.1e-47 192.6 143 70.6
CANSAT25G0005 Cannabis sativa HOM05D005831 ORTHO05D007007 8.0e-47 190.7 142 73.2
Hma1.2p1_0231F.1_g097400 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 1.0e-46 190.3 142 70.4
TAR383G0824 Trochodendron aralioides HOM05D005831 ORTHO05D007007 1.8e-46 189.5 143 71.3
MD15G1051800 Malus domestica HOM05D005831 ORTHO05D007007 3.0e-46 188.7 143 69.9
Gohir.D07G020000 Gossypium hirsutum HOM05D005831 ORTHO05D007007 6.8e-46 187.6 144 73.6
Gorai.001G020700 Gossypium raimondii HOM05D005831 ORTHO05D007007 6.8e-46 187.6 144 73.6
Lj2A627G34 Lonicera japonica HOM05D005831 ORTHO05D007007 6.8e-46 187.6 140 70.7
DCAR_003715 Daucus carota HOM05D005831 ORTHO05D007007 2.0e-45 186.0 143 68.5
FvH4_2g31140 Fragaria vesca HOM05D005831 ORTHO05D007007 3.4e-45 185.3 143 68.5
FAN24G1737 Fragaria x ananassa HOM05D005831 ORTHO05D007007 3.4e-45 185.3 143 68.5
FAN27G2028 Fragaria x ananassa HOM05D005831 ORTHO05D007007 3.4e-45 185.3 143 67.8
CiPaw.15G092600 Carya illinoinensis HOM05D005831 ORTHO05D007007 5.7e-45 184.5 143 69.9
Manes.03G052700 Manihot esculenta HOM05D005831 ORTHO05D007007 5.7e-45 184.5 142 69.7
FAN20G1335 Fragaria x ananassa HOM05D001583 ORTHO05D007007 9.8e-45 183.7 143 67.8
Sed0012871 Sechium edule HOM05D005831 ORTHO05D007007 9.8e-45 183.7 142 67.6
ClCG05G015690 Citrullus lanatus HOM05D005831 ORTHO05D007007 1.7e-44 183.0 142 69.0
RcHm_v2.0_Chr6g0311631 Rosa chinensis HOM05D005831 ORTHO05D007007 2.2e-44 182.6 143 67.8
Actinidia25695 Actinidia chinensis HOM05D005831 ORTHO05D007007 2.8e-44 182.2 143 67.8
FAN15G1366 Fragaria x ananassa HOM05D005831 ORTHO05D007007 2.8e-44 182.2 142 69.0
Aqoxy2G00096 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 3.7e-44 181.8 142 67.6
Nn8g38706 Nelumbo nucifera HOM05D005831 ORTHO05D007007 3.7e-44 181.8 143 66.4
Aqoxy3G01853 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 4.8e-44 181.4 142 67.6
MBI19_g11845_MAGBIO Magnolia biondii HOM05D005831 ORTHO05D007007 4.8e-44 181.4 143 65.7
Aqoxy3G01546 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 6.3e-44 181.0 142 66.9
Nitab4.5_0000446g0240 Nicotiana tabacum HOM05D005831 ORTHO05D007007 6.3e-44 181.0 143 66.4
ECA234G1597 Erigeron canadensis HOM05D005831 ORTHO05D007007 8.3e-44 180.6 142 67.6
Atru.chr7.1858 Acer truncatum HOM05D005831 ORTHO05D007007 1.4e-43 179.9 143 67.1
MELO3C016909.2 Cucumis melo HOM05D005831 ORTHO05D007007 1.4e-43 179.9 142 67.6
Potri.006G222000 Populus trichocarpa HOM05D005831 ORTHO05D007007 1.4e-43 179.9 143 67.8
CsaV3_4G036010 Cucumis sativus L. HOM05D005831 ORTHO05D007007 3.1e-43 178.7 142 66.9
Dinv41837 Davidia involucrata HOM05D005831 ORTHO05D007007 3.1e-43 178.7 143 66.4
Lsat_1_v5_gn_5_79500 Lactuca sativa HOM05D005831 ORTHO05D007007 9.1e-43 177.2 142 66.9
PSO210G0521 Papaver somniferum HOM05D005831 ORTHO05D007007 9.1e-43 177.2 142 64.8
CAN.G6.15 Capsicum annuum HOM05D005831 ORTHO05D007007 1.2e-42 176.8 143 65.0
PSO210G7793 Papaver somniferum HOM05D005831 ORTHO05D007007 1.2e-42 176.8 142 64.8
PGR004G2090 Punica granatum HOM05D005831 ORTHO05D007007 1.2e-42 176.8 142 66.2
Oeu027284.3 Olea europaea HOM05D005831 ORTHO05D007007 2.0e-42 176.0 143 65.7
Ciclev10025877m.g Citrus clementina HOM05D005831 ORTHO05D007007 2.7e-42 175.6 142 68.3
PGSC0003DMG400003758 Solanum tuberosum HOM05D005831 ORTHO05D007007 2.7e-42 175.6 143 63.6
vmacro07801 Vaccinium macrocarpon HOM05D005831 ORTHO05D007007 2.7e-42 175.6 143 63.6
HanXRQChr12g0359011 Helianthus annuus HOM05D005831 ORTHO05D007007 4.5e-42 174.9 142 67.6
Cpa.g.sc126.34 Carica papaya HOM05D005831 ORTHO05D007007 1.3e-41 173.3 142 66.2
AUR62020581 Chenopodium quinoa HOM05D005831 ORTHO05D007007 1.3e-41 173.3 142 66.9
TWI15G0825 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 2.9e-41 172.2 142 64.8
Eucgr.C03149 Eucalyptus grandis HOM05D005831 ORTHO05D007007 3.8e-41 171.8 143 65.7
Sopen04g034540 Solanum pennellii HOM05D005831 ORTHO05D007007 3.8e-41 171.8 143 62.9
SalBow4G2055 Salvia bowleyana HOM05D005831 ORTHO05D001900 6.5e-41 171.0 143 63.6
MSTRG.25981 Avicennia marina HOM05D005831 ORTHO05D007007 8.6e-41 170.6 143 63.6
Solyc04g080930.4 Solanum lycopersicum HOM05D005831 ORTHO05D007007 1.1e-40 170.2 143 62.2
CSS0021293 Camellia sinensis var. sinensis HOM05D005831 ORTHO05D007007 1.5e-40 169.9 143 61.5
Nitab4.5_0009773g0010 Nicotiana tabacum HOM05D005831 ORTHO05D007007 4.2e-40 168.3 143 62.2
SGA_v2.0_scaffold64G21865 Striga asiatica HOM05D005831 ORTHO05D007007 5.5e-40 167.9 143 61.5
Migut.A00086 Erythranthe guttata HOM05D005831 ORTHO05D007007 4.7e-39 164.9 143 62.9
Peaxi162Scf00101g01522 Petunia axillaris HOM05D005831 ORTHO05D007007 8.0e-39 164.1 137 62.0
Rhsim03G0040100 Rhododendron simsii HOM05D005831 ORTHO05D007007 1.8e-38 162.9 143 60.8
Sc09g0010090 Simmondsia chinensis HOM05D005831 ORTHO05D007007 6.8e-38 161.0 143 62.9
Gohir.A07G020300 Gossypium hirsutum HOM05D005831 ORTHO05D007007 8.9e-38 160.6 128 70.3
Migut.A00085 Erythranthe guttata HOM05D005831 ORTHO05D007007 1.2e-37 160.2 141 62.4
EL10Ac2g03793 Beta vulgaris HOM05D005831 ORTHO05D007007 2.6e-37 159.1 142 59.9
Ca_13107_v3 Cicer arietinum L. HOM05D005831 ORTHO05D007007 7.5e-37 157.5 143 65.0
Cc08_g01270 Coffea canephora HOM05D005831 ORTHO05D007007 7.5e-37 157.5 143 60.8
CDE06G1722 Ceratophyllum demersum HOM05D005831 ORTHO05D007007 1.7e-36 156.4 142 57.7
ATR0598G074 Amborella trichopoda HOM05D005831 ORTHO05D007007 3.7e-36 155.2 143 53.8
Carub.0004s0626 Capsella rubella HOM05D005831 ORTHO05D007007 3.7e-36 155.2 142 57.7
Sp4g07000 Schrenkiella parvula HOM05D005831 ORTHO05D007007 1.4e-35 153.3 142 57.0
Sed0000493 Sechium edule HOM05D005831 ORTHO05D007007 3.1e-35 152.1 127 61.4
Thhalv10002014m.g Eutrema salsugineum HOM05D005831 ORTHO05D007007 5.4e-35 151.4 142 56.3
Os07g0608800 Oryza sativa ssp. japonica HOM05D005831 ORTHO05D007007 9.2e-35 150.6 146 55.5
Aa31LG5G18500 Aethionema arabicum HOM05D005831 ORTHO05D007007 1.6e-34 149.8 143 54.5
AT2G26350 Arabidopsis thaliana HOM05D005831 ORTHO05D007007 2.7e-34 149.1 142 55.6
HPP92_027843 Vanilla planifolia HOM05D005831 ORTHO05D007007 2.7e-34 149.1 143 54.5
AL4G18970 Arabidopsis lyrata HOM05D005831 ORTHO05D007007 4.5e-34 148.3 143 55.9
unitig_748.g8240 Utricularia gibba HOM05D005831 ORTHO05D007007 7.8e-34 147.5 143 54.5
BcaB08g35248 Brassica carinata HOM05D005831 ORTHO05D007007 1.7e-33 146.4 142 55.6
AUR62009089 Chenopodium quinoa HOM05D005831 ORTHO05D007007 1.9e-32 142.9 116 63.8
C08p38160 Brassica napus HOM05D005831 ORTHO05D007007 4.3e-32 141.7 144 52.8
BolC8t51391H Brassica oleracea HOM05D005831 ORTHO05D007007 4.3e-32 141.7 144 52.8
BcaC07g40824 Brassica carinata HOM05D005831 ORTHO05D007007 7.3e-32 141.0 142 51.4
A09p54720 Brassica napus HOM05D005831 ORTHO05D007007 3.6e-31 138.7 142 50.7
A09p55230 Brassica napus HOM05D005831 ORTHO05D007007 3.6e-31 138.7 142 50.7
BraA09t40881Z Brassica rapa HOM05D005831 ORTHO05D007007 3.6e-31 138.7 142 50.7
BraA09t40930Z Brassica rapa HOM05D005831 ORTHO05D007007 6.1e-31 137.9 142 50.0
arahy.Tifrunner.gnm1.ann1.2ULK6I Arachis hypogaea HOM05D005831 ORTHO05D007007 1.4e-30 136.7 142 59.9
TPR.G38878 Trifolium pratense HOM05D005831 ORTHO05D007007 4.9e-28 128.3 71 94.4
Mapoly0029s0064 Marchantia polymorpha HOM05D005831 ORTHO05D007007 5.0e-25 118.2 155 45.2
QL04p096516 Quercus lobata HOM05D000005 ORTHO05D000012 5.0e-25 118.2 103 63.1
Zm00001eb108960 Zea mays HOM05D005831 ORTHO05D007007 8.6e-25 117.5 71 77.5
Hma1.2p1_0231F.1_g097410 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 2.5e-24 115.9 107 58.9
Pp3c13_19650 Physcomitrium patens HOM05D005831 ORTHO05D007007 2.8e-23 112.5 143 45.5
Sabra06G0171700 Salix brachista HOM05D005831 ORTHO05D007007 4.7e-23 111.7 158 47.5
TWI38G0260 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 1.1e-22 110.5 142 49.3
arahy.Tifrunner.gnm1.ann1.12X2WP Arachis hypogaea HOM05D005831 ORTHO05D007007 2.0e-21 106.3 142 52.1
arahy.Tifrunner.gnm1.ann1.VR587A Arachis hypogaea HOM05D005831 ORTHO05D007007 3.2e-19 99.0 102 56.9
RcHm_v2.0_Chr4g0387071 Rosa chinensis HOM05D005831 ORTHO05D007007 2.1e-18 96.3 104 51.9
THA.LOC104806019 Tarenaya hassleriana HOM05D005831 ORTHO05D007007 1.5e-13 80.1 150 33.3
Actinidia27570 Actinidia chinensis HOM05D005831 ORTHO05D007007 7.5e-13 77.8 48 77.1
SEGI_09079 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.3e-12 77.0 105 41.0
CBR_g34477 Chara braunii HOM05D005831 ORTHO05D007007 2.2e-12 76.3 104 41.3
PRCOL_00001676 Prasinoderma coloniale HOM05D005831 ORTHO05D007007 3.5e-10 68.9 72 43.1
Cre07.g337050 Chlamydomonas reinhardtii HOM05D005831 ORTHO05D007007 1.7e-09 66.6 87 44.8
SHI18844 Sapria himalayana HOM05D005831 ORTHO05D007007 2.3e-09 66.2 97 45.4
Actinidia28224 Actinidia chinensis HOM05D000290 ORTHO05D007007 9.5e-08 60.8 31 83.9
QL06p019149 Quercus lobata HOM05D005831 ORTHO05D007007 6.2e-07 58.2 71 52.1


User provided reference genes

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