Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40621 Trifolium pratense HOM05D000092 ORTHO05D005910 7.8e-71 270.4 140 100.0
TPR.G20384 Trifolium pratense HOM05D000092 ORTHO05D005910 1.6e-52 209.5 136 81.6
TPR.G15149 Trifolium pratense HOM05D000092 ORTHO05D005910 3.9e-46 188.3 150 72.0
Medtr3g464920 Medicago truncatula HOM05D000092 ORTHO05D000042 2.5e-45 185.7 143 70.6
Medtr3g062320 Medicago truncatula HOM05D000092 ORTHO05D005910 4.0e-43 178.3 150 64.7
Ca_15035_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 2.0e-42 176.0 150 64.7
Ca_15038_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.6e-42 175.6 150 64.7
Medtr3g063010 Medicago truncatula HOM05D000092 ORTHO05D005910 2.6e-42 175.6 157 63.7
TPR.G34177 Trifolium pratense HOM05D000092 ORTHO05D005910 1.3e-41 173.3 143 66.4
TPR.G35609 Trifolium pratense HOM05D000092 ORTHO05D005910 4.9e-41 171.4 144 64.6
TPR.G5137 Trifolium pratense HOM05D000092 ORTHO05D005910 6.4e-41 171.0 157 63.1
Medtr3g062340 Medicago truncatula HOM05D000092 ORTHO05D005910 1.4e-40 169.9 157 61.8
TPR.G27793 Trifolium pratense HOM05D000092 ORTHO05D005910 1.4e-40 169.9 143 63.6
Medtr3g464950 Medicago truncatula HOM05D000092 ORTHO05D000042 1.2e-39 166.8 157 61.1
TPR.G5820 Trifolium pratense HOM05D000092 ORTHO05D005910 1.2e-39 166.8 157 61.8
Ca_27780_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 6.0e-39 164.5 157 59.2
Medtr3g464870 Medicago truncatula HOM05D000092 ORTHO05D005910 7.8e-39 164.1 157 59.9
Medtr3g062980 Medicago truncatula HOM05D000092 ORTHO05D005910 3.0e-38 162.2 150 62.0
Medtr3g435040 Medicago truncatula HOM05D000092 ORTHO05D005910 3.0e-38 162.2 127 68.5
Ca_14166_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 3.9e-38 161.8 157 59.9
Psat5g150000 Pisum sativum HOM05D000092 ORTHO05D005910 3.9e-38 161.8 137 67.2
Ca_14170_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 6.6e-38 161.0 157 59.2
Medtr3g062420 Medicago truncatula HOM05D000092 ORTHO05D005910 6.6e-38 161.0 127 67.7
Ca_14173_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.5e-37 159.8 157 59.2
Ca_30441_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.5e-37 159.8 157 59.2
Medtr3g451150 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-37 159.8 142 64.1
Medtr3g452250 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-37 159.8 142 64.1
Medtr0922s0020 Medicago truncatula HOM05D000092 ORTHO05D005910 1.9e-37 159.5 143 63.6
Medtr3g464810 Medicago truncatula HOM05D000092 ORTHO05D000042 4.3e-37 158.3 112 72.3
TPR.G24935 Trifolium pratense HOM05D000092 ORTHO05D000042 1.6e-36 156.4 144 63.2
Medtr3g062400 Medicago truncatula HOM05D000092 ORTHO05D005910 2.1e-36 156.0 143 61.5
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 2.1e-36 156.0 144 61.1
Medtr3g466750 Medicago truncatula HOM05D000092 ORTHO05D005910 4.8e-36 154.8 157 58.0
Psat5g155080 Pisum sativum HOM05D000092 ORTHO05D005910 2.4e-35 152.5 143 60.1
TPR.G13544 Trifolium pratense HOM05D000092 ORTHO05D005910 1.2e-34 150.2 122 66.4
TPR.G20720 Trifolium pratense HOM05D000092 ORTHO05D005910 1.2e-34 150.2 145 57.2
Medtr3g062140 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-34 149.8 112 69.6
Medtr3g062180 Medicago truncatula HOM05D000092 ORTHO05D005910 1.5e-34 149.8 112 69.6
Medtr2g049960 Medicago truncatula HOM05D000092 ORTHO05D005910 9.9e-34 147.1 157 54.8
TPR.G35834 Trifolium pratense HOM05D000092 ORTHO05D005910 9.9e-34 147.1 157 54.8
Ca_15039_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 2.9e-33 145.6 93 76.3
Psat7g235480 Pisum sativum HOM05D000092 ORTHO05D005910 2.4e-32 142.5 156 53.2
Medtr7g026240 Medicago truncatula HOM05D000092 ORTHO05D005910 7.1e-32 141.0 137 57.7
Phvul.010G023400 Phaseolus vulgaris HOM05D000092 ORTHO05D005910 7.1e-32 141.0 137 57.7
Medtr3g062010 Medicago truncatula HOM05D000092 ORTHO05D000042 1.8e-30 136.3 142 52.8
Medtr3g027360 Medicago truncatula HOM05D000092 ORTHO05D005910 1.3e-28 130.2 99 65.7
TPR.G35072 Trifolium pratense HOM05D000092 ORTHO05D005910 1.6e-28 129.8 110 68.2
Ca_14011_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 1.8e-27 126.3 140 57.1
Ca_14165_v3 Cicer arietinum L. HOM05D000092 ORTHO05D005910 4.0e-27 125.2 140 56.4
TPR.G40185 Trifolium pratense HOM05D000092 ORTHO05D005910 4.0e-27 125.2 151 55.6
TPR.G23432 Trifolium pratense HOM05D000092 ORTHO05D005910 9.0e-27 124.0 104 68.3
Medtr1147s0010 Medicago truncatula HOM05D000092 ORTHO05D005910 1.7e-25 119.8 127 55.1
Psat5g150040 Pisum sativum HOM05D000092 ORTHO05D005910 6.4e-25 117.9 133 53.4
Medtr2g451270 Medicago truncatula HOM05D000092 ORTHO05D005910 1.1e-19 100.5 157 43.9
Medtr3g048690 Medicago truncatula HOM05D000092 ORTHO05D000042 1.3e-17 93.6 61 78.7
VMungo0331G0363 Vigna mungo HOM05D000092 ORTHO05D000042 1.7e-17 93.2 77 57.1
Medtr3g062130 Medicago truncatula HOM05D000092 ORTHO05D005910 2.5e-16 89.4 121 44.6
Medtr2g023000 Medicago truncatula HOM05D000092 ORTHO05D005910 3.5e-15 85.5 98 51.0
Medtr3g069220 Medicago truncatula HOM05D000092 ORTHO05D005910 1.0e-14 84.0 71 59.2
TPR.G29423 Trifolium pratense HOM05D000092 ORTHO05D005910 7.4e-13 77.8 58 74.1
TPR.G39391 Trifolium pratense HOM05D000092 ORTHO05D005910 8.2e-12 74.3 46 82.6
Medtr2g450490 Medicago truncatula HOM05D000092 ORTHO05D005910 1.1e-11 73.9 93 48.4
Medtr3g466550 Medicago truncatula HOM05D000092 ORTHO05D005910 1.1e-11 73.9 93 48.4
Psat5g155000 Pisum sativum HOM05D000092 ORTHO05D005910 2.9e-09 65.9 43 76.7
Psat5g149920 Pisum sativum HOM05D000092 ORTHO05D005910 1.4e-08 63.5 44 75.0
arahy.Tifrunner.gnm1.ann1.CULB88 Arachis hypogaea HOM05D008660 ORTHO05D005910 5.5e-08 61.6 148 30.4
TPR.G10936 Trifolium pratense HOM05D000092 ORTHO05D005910 9.3e-08 60.8 39 82.1
arahy.Tifrunner.gnm1.ann1.79SUWC Arachis hypogaea HOM05D000092 ORTHO05D011874 1.2e-07 60.5 148 29.7
TPR.G20665 Trifolium pratense HOM05D008660 ORTHO05D005910 3.6e-07 58.9 68 57.4
Medtr3g063320 Medicago truncatula HOM05D000092 ORTHO05D005910 1.3e-06 57.0 81 46.9


User provided reference genes

Program Settings