Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40575 Trifolium pratense HOM05D000397 ORTHO05D002023 1.4e-90 336.3 169 100.0
TPR.G38966 Trifolium pratense HOM05D000397 ORTHO05D002023 8.4e-88 327.0 169 97.0
Medtr2g079310 Medicago truncatula HOM05D000397 ORTHO05D002023 8.8e-69 263.8 174 78.2
Psat5g242840 Pisum sativum HOM05D000397 ORTHO05D002023 7.4e-60 234.2 177 69.5
Ca_01838_v3 Cicer arietinum L. HOM05D000397 ORTHO05D002023 1.3e-56 223.4 173 69.9
Lj3g0026221 Lotus japonicus HOM05D000397 ORTHO05D002023 7.5e-36 154.5 175 54.3
Glyma.13G277500 Glycine max HOM05D000397 ORTHO05D002023 1.8e-29 133.3 172 50.0
Phvul.005G065300 Phaseolus vulgaris HOM05D000397 ORTHO05D002023 1.8e-29 133.3 173 48.6
Glyma.12G224000 Glycine max HOM05D000397 ORTHO05D002023 2.4e-26 122.9 174 44.8
Lalb_Chr25g0286401 Lupinus albus HOM05D000397 ORTHO05D002023 4.1e-26 122.1 175 46.9
Lalb_Chr01g0016881 Lupinus albus HOM05D000397 ORTHO05D002023 7.3e-23 111.3 173 44.5
VMungo1080G0545 Vigna mungo HOM05D000397 ORTHO05D002023 7.3e-23 111.3 167 43.7
Psat5g244640 Pisum sativum HOM05D000397 ORTHO05D002023 3.7e-19 99.0 172 37.8
TPR.G38996 Trifolium pratense HOM05D000397 ORTHO05D002023 1.1e-18 97.4 173 38.7
Medtr2g079300 Medicago truncatula HOM05D000397 ORTHO05D002023 2.1e-17 93.2 171 38.0
QL08p021666 Quercus lobata HOM05D000397 ORTHO05D002023 7.3e-15 84.7 165 38.2
Aqoxy1G02427 Aquilegia oxysepala HOM05D000397 ORTHO05D002023 1.2e-14 84.0 154 37.7
CSS0033816 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 1.6e-14 83.6 164 34.1
CSS0003130 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 3.6e-14 82.4 161 36.6
CSS0011471 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 3.6e-14 82.4 161 36.6
Glyma.06G244800 Glycine max HOM05D000397 ORTHO05D002023 3.6e-14 82.4 161 36.6
MBI07_g30172_MAGBIO Magnolia biondii HOM05D000397 ORTHO05D002023 3.6e-14 82.4 182 37.9
Phvul.001G079400 Phaseolus vulgaris HOM05D000397 ORTHO05D002023 3.6e-14 82.4 161 37.9
QL08p021701 Quercus lobata HOM05D000397 ORTHO05D002023 3.6e-14 82.4 169 35.5
Hma1.2p1_0885F.1_g232630 Hydrangea macrophylla HOM05D000397 ORTHO05D002023 6.2e-14 81.6 175 36.0
Hma1.2p1_0885F.1_g232635 Hydrangea macrophylla HOM05D000397 ORTHO05D002023 6.2e-14 81.6 175 36.0
VMungo1383G3263 Vigna mungo HOM05D000397 ORTHO05D002023 6.2e-14 81.6 157 37.6
Eucgr.F01124 Eucalyptus grandis HOM05D000397 ORTHO05D002023 8.1e-14 81.3 148 37.2
MD11G1246300 Malus domestica HOM05D000397 ORTHO05D002023 1.1e-13 80.9 167 37.7
TAR624G1261 Trochodendron aralioides HOM05D000397 ORTHO05D002023 1.4e-13 80.5 180 36.1
Atru.chr2.2698 Acer truncatum HOM05D000397 ORTHO05D002023 2.3e-13 79.7 159 35.8
Potri.003G087400 Populus trichocarpa HOM05D000397 ORTHO05D002023 2.3e-13 79.7 169 33.1
Prupe.4G182000 Prunus persica HOM05D000397 ORTHO05D002023 2.3e-13 79.7 182 35.2
Dinv04308 Davidia involucrata HOM05D000397 ORTHO05D002023 3.1e-13 79.3 168 38.1
QL03p071110 Quercus lobata HOM05D000397 ORTHO05D002023 5.2e-13 78.6 163 36.8
Thecc.07G088700 Theobroma cacao HOM05D000397 ORTHO05D002023 8.9e-13 77.8 167 34.1
CSS0009049 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 2.0e-12 76.6 179 36.3
GSVIVG01014347001 Vitis vinifera HOM05D000397 ORTHO05D002023 2.0e-12 76.6 167 36.5
MD11G1246400 Malus domestica HOM05D000397 ORTHO05D002023 3.4e-12 75.9 187 32.1
Atru.chr2.2620 Acer truncatum HOM05D000397 ORTHO05D002023 5.8e-12 75.1 159 35.2
HanXRQChr13g0424261 Helianthus annuus HOM05D000397 ORTHO05D002023 5.8e-12 75.1 162 32.7
Rhsim04G0020600 Rhododendron simsii HOM05D000397 ORTHO05D002023 9.9e-12 74.3 165 33.3
Haze_09422 Corylus avellana HOM05D000397 ORTHO05D002023 1.7e-11 73.6 169 34.3
Gohir.D01G050700 Gossypium hirsutum HOM05D000397 ORTHO05D002023 1.7e-11 73.6 165 31.5
Gorai.002G070600 Gossypium raimondii HOM05D000397 ORTHO05D002023 2.2e-11 73.2 165 31.5
Atru.chr2.2699 Acer truncatum HOM05D000397 ORTHO05D002023 3.7e-11 72.4 172 34.9
Nn1g06534 Nelumbo nucifera HOM05D000397 ORTHO05D002023 3.7e-11 72.4 176 31.8
Duzib268G1410 Durio zibethinus HOM05D000397 ORTHO05D002023 4.9e-11 72.0 169 32.5
Sabra03G0057200 Salix brachista HOM05D000397 ORTHO05D002023 4.9e-11 72.0 170 32.9
CiPaw.11G169100 Carya illinoinensis HOM05D000397 ORTHO05D002023 6.4e-11 71.6 176 34.7
Ciclev10010435m.g Citrus clementina HOM05D000397 ORTHO05D002023 6.4e-11 71.6 161 33.5
DCAR_010209 Daucus carota HOM05D000397 ORTHO05D002023 6.4e-11 71.6 168 32.7
PSO541G5412 Papaver somniferum HOM05D000397 ORTHO05D002023 6.4e-11 71.6 167 32.9
Prupe.4G181700 Prunus persica HOM05D000397 ORTHO05D002023 8.3e-11 71.2 158 36.1
Thecc.07G088400 Theobroma cacao HOM05D000397 ORTHO05D002023 8.3e-11 71.2 167 32.3
Cfa020591 Carpinus fangiana HOM05D000397 ORTHO05D002023 2.4e-10 69.7 148 35.1
PSO675G7294 Papaver somniferum HOM05D000397 ORTHO05D002023 2.4e-10 69.7 167 32.3
Manes.15G173200 Manihot esculenta HOM05D000397 ORTHO05D002023 3.2e-10 69.3 172 33.1
Gohir.A01G064000 Gossypium hirsutum HOM05D000397 ORTHO05D002023 4.1e-10 68.9 165 30.9
Gohir.D05G356300 Gossypium hirsutum HOM05D000397 ORTHO05D002023 4.1e-10 68.9 166 30.7
HanXRQChr09g0272671 Helianthus annuus HOM05D000397 ORTHO05D002023 5.4e-10 68.6 165 33.3
Atru.chr2.2619 Acer truncatum HOM05D000397 ORTHO05D002023 1.2e-09 67.4 171 31.0
Gorai.007G322400 Gossypium raimondii HOM05D000397 ORTHO05D002023 2.1e-09 66.6 156 30.1
Duzib213G0657 Durio zibethinus HOM05D000397 ORTHO05D002023 2.7e-09 66.2 180 33.3
RcHm_v2.0_Chr5g0034201 Rosa chinensis HOM05D000397 ORTHO05D002023 2.7e-09 66.2 176 30.7
Thecc.07G088900 Theobroma cacao HOM05D000397 ORTHO05D002023 2.7e-09 66.2 178 32.0
Dinv07559 Davidia involucrata HOM05D000397 ORTHO05D002023 3.5e-09 65.9 167 31.7
Duzib268G0967 Durio zibethinus HOM05D000397 ORTHO05D002023 3.5e-09 65.9 169 30.2
Rhsim04G0021000 Rhododendron simsii HOM05D000397 ORTHO05D002023 3.5e-09 65.9 173 31.8
MD11G1246500 Malus domestica HOM05D000397 ORTHO05D002023 4.6e-09 65.5 187 29.9
RcHm_v2.0_Chr5g0033881 Rosa chinensis HOM05D000397 ORTHO05D002023 4.6e-09 65.5 182 34.1
Lsat_1_v5_gn_9_96581 Lactuca sativa HOM05D000397 ORTHO05D002023 6.0e-09 65.1 161 29.8
Ciclev10010518m.g Citrus clementina HOM05D000397 ORTHO05D002023 1.0e-08 64.3 153 32.7
COL.COLO4_24815 Corchorus olitorius HOM05D000397 ORTHO05D002023 1.0e-08 64.3 172 30.2
DCAR_013102 Daucus carota HOM05D000397 ORTHO05D002023 1.0e-08 64.3 154 32.5
RcHm_v2.0_Chr5g0034271 Rosa chinensis HOM05D000397 ORTHO05D002023 1.0e-08 64.3 172 36.6
Sabra03G0057300 Salix brachista HOM05D000397 ORTHO05D002023 1.3e-08 63.9 170 28.8
RcHm_v2.0_Chr5g0034231 Rosa chinensis HOM05D000397 ORTHO05D002023 1.7e-08 63.5 173 34.7
Atru.chr2.2627 Acer truncatum HOM05D000397 ORTHO05D002023 2.3e-08 63.2 174 33.3
Gohir.D05G356600 Gossypium hirsutum HOM05D000397 ORTHO05D002023 2.3e-08 63.2 166 30.1
Gorai.N016800 Gossypium raimondii HOM05D000397 ORTHO05D002023 2.3e-08 63.2 166 30.1
MSTRG.14360 Avicennia marina HOM05D000397 ORTHO05D002023 3.0e-08 62.8 153 32.0
Lj1C844T5 Lonicera japonica HOM05D000397 ORTHO05D002023 3.0e-08 62.8 164 32.9
ECA240G0650 Erigeron canadensis HOM05D000397 ORTHO05D002023 3.9e-08 62.4 117 32.5
Gohir.A04G030200 Gossypium hirsutum HOM05D000397 ORTHO05D002023 3.9e-08 62.4 166 29.5
HanXRQChr03g0078561 Helianthus annuus HOM05D000397 ORTHO05D002023 3.9e-08 62.4 163 31.9
Rhsim04G0020700 Rhododendron simsii HOM05D000397 ORTHO05D002023 3.9e-08 62.4 142 31.7
FAN11G1045 Fragaria x ananassa HOM05D000397 ORTHO05D002023 5.1e-08 62.0 176 31.8
Lsat_1_v5_gn_9_96680 Lactuca sativa HOM05D000397 ORTHO05D002023 5.1e-08 62.0 168 29.2
PGR083G1019 Punica granatum HOM05D000397 ORTHO05D002023 5.1e-08 62.0 175 32.6
Duzib213G0914 Durio zibethinus HOM05D000397 ORTHO05D002023 6.6e-08 61.6 170 30.0
Gohir.A01G063925 Gossypium hirsutum HOM05D000397 ORTHO05D002023 6.6e-08 61.6 169 29.6
Duzib213G0908 Durio zibethinus HOM05D000397 ORTHO05D002023 8.6e-08 61.2 169 30.2
Migut.M00810 Erythranthe guttata HOM05D000397 ORTHO05D002023 8.6e-08 61.2 161 32.9
Thecc.07G089000 Theobroma cacao HOM05D000397 ORTHO05D002023 8.6e-08 61.2 149 32.9
SalBow7G3370 Salvia bowleyana HOM05D000397 ORTHO05D002023 1.1e-07 60.8 168 30.4
FAN11G4036 Fragaria x ananassa HOM05D000397 ORTHO05D002023 1.5e-07 60.5 175 32.0
Potri.011G052500 Populus trichocarpa HOM05D000397 ORTHO05D002023 1.5e-07 60.5 170 28.8
SalBow7G4188 Salvia bowleyana HOM05D000397 ORTHO05D002023 1.5e-07 60.5 159 28.9
Gohir.D05G356400 Gossypium hirsutum HOM05D000397 ORTHO05D002023 1.9e-07 60.1 166 30.1
MD11G1246600 Malus domestica HOM05D000397 ORTHO05D002023 1.9e-07 60.1 176 31.8
FvH4_3g20050 Fragaria vesca HOM05D000397 ORTHO05D002023 2.5e-07 59.7 183 32.8
Atru.chr2.2636 Acer truncatum HOM05D000397 ORTHO05D002023 3.3e-07 59.3 146 32.9
CSS0002760 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 3.3e-07 59.3 158 34.2
COL.COLO4_24814 Corchorus olitorius HOM05D000397 ORTHO05D002023 3.3e-07 59.3 141 31.2
Cc05_g12090 Coffea canephora HOM05D000397 ORTHO05D002023 4.3e-07 58.9 164 31.1
Gohir.D05G356866 Gossypium hirsutum HOM05D000397 ORTHO05D002023 4.3e-07 58.9 166 30.7
Gorai.009G388500 Gossypium raimondii HOM05D000397 ORTHO05D002023 4.3e-07 58.9 150 30.0
CSS0048812 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 5.6e-07 58.5 158 34.2
TWI63G1212 Tripterygium wilfordii HOM05D000397 ORTHO05D002023 5.6e-07 58.5 155 31.6
Dinv40561 Davidia involucrata HOM05D000397 ORTHO05D002023 7.3e-07 58.2 159 32.7
FAN21G2793 Fragaria x ananassa HOM05D000397 ORTHO05D002023 7.3e-07 58.2 169 31.4
FAN25G1777 Fragaria x ananassa HOM05D000397 ORTHO05D002023 7.3e-07 58.2 169 31.4
Gohir.D05G356500 Gossypium hirsutum HOM05D000397 ORTHO05D002023 7.3e-07 58.2 150 28.7
HanXRQChr09g0272691 Helianthus annuus HOM05D000397 ORTHO05D002023 7.3e-07 58.2 170 30.0
VMungo1080G1423 Vigna mungo HOM05D000397 ORTHO05D002023 9.5e-07 57.8 44 59.1
SGA_v2.0_scaffold9G04921 Striga asiatica HOM05D000397 ORTHO05D002023 1.6e-06 57.0 151 31.1
GSVIVG01014344001 Vitis vinifera HOM05D000397 ORTHO05D002023 1.6e-06 57.0 159 33.3
Migut.H01933 Erythranthe guttata HOM05D000397 ORTHO05D002023 2.1e-06 56.6 145 33.1
FvH4_3g20291 Fragaria vesca HOM05D000397 ORTHO05D002023 2.1e-06 56.6 170 29.4
Gohir.A04G029908 Gossypium hirsutum HOM05D000397 ORTHO05D002023 2.1e-06 56.6 165 27.3
Hma1.2p1_0785F.1_g217460 Hydrangea macrophylla HOM05D000397 ORTHO05D002023 2.1e-06 56.6 168 29.8
FAN16G3478 Fragaria x ananassa HOM05D000397 ORTHO05D002023 3.6e-06 55.8 175 30.9
Prupe.4G047300 Prunus persica HOM05D000397 ORTHO05D002023 3.6e-06 55.8 150 30.0
QL05p040325 Quercus lobata HOM05D000397 ORTHO05D002023 4.7e-06 55.5 112 35.7
SalBow7G0134 Salvia bowleyana HOM05D000397 ORTHO05D002023 4.7e-06 55.5 162 26.5


User provided reference genes

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